RNA–Protein interactions for RNA: ENST00000390398.3

TRBV25-1-202, Transcript of T cell receptor beta variable 25-1, humanhuman

APPRIS P1 BASIC

Gene TRBV25-1, Length 381 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1-202ENST00000390398 GGNBP2Q9H3C7 697 aa9.84□□□□□ -0.83
TRBV25-1-202ENST00000390398 C1orf167Q5SNV9 1468 aa9.84□□□□□ -0.83
TRBV25-1-202ENST00000390398 PIK3C2AO00443 1686 aa9.83□□□□□ -0.84
TRBV25-1-202ENST00000390398 MORC1Q86VD1 984 aa9.83□□□□□ -0.84
TRBV25-1-202ENST00000390398 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.83□□□□□ -0.84
TRBV25-1-202ENST00000390398 PHF8Q9UPP1 1060 aa9.83□□□□□ -0.84
TRBV25-1-202ENST00000390398 USP54Q70EL1 1684 aa9.83□□□□□ -0.84
TRBV25-1-202ENST00000390398 TTC21BQ7Z4L5 1316 aa9.82□□□□□ -0.84
TRBV25-1-202ENST00000390398 LTBP4Q8N2S1 1624 aa9.82□□□□□ -0.84
TRBV25-1-202ENST00000390398 NME9Q86XW9 330 aa9.82□□□□□ -0.84
TRBV25-1-202ENST00000390398 NGDNQ8NEJ9 315 aaKnown RBP9.82□□□□□ -0.84
TRBV25-1-202ENST00000390398 PNISRQ8TF01 805 aaKnown RBP9.82□□□□□ -0.84
TRBV25-1-202ENST00000390398 ZRANB1Q9UGI0 708 aa9.82□□□□□ -0.84
TRBV25-1-202ENST00000390398 MSH6P52701 1360 aa9.82□□□□□ -0.84
TRBV25-1-202ENST00000390398 TRPM3Q9HCF6 1732 aaPredicted RBP9.82□□□□□ -0.84
TRBV25-1-202ENST00000390398 SHPRHQ149N8 1683 aa9.81□□□□□ -0.84
TRBV25-1-202ENST00000390398 ATF3P18847 181 aa9.81□□□□□ -0.84
TRBV25-1-202ENST00000390398 TNNT2P45379 298 aaPredicted RBP9.81□□□□□ -0.84
TRBV25-1-202ENST00000390398 ESCO1Q5FWF5 840 aa9.81□□□□□ -0.84
TRBV25-1-202ENST00000390398 ORAI2Q96SN7 254 aa9.81□□□□□ -0.84
TRBV25-1-202ENST00000390398 CADPS2Q86UW7 1296 aa9.8□□□□□ -0.84
TRBV25-1-202ENST00000390398 FAM9BQ8IZU0 186 aa9.8□□□□□ -0.84
TRBV25-1-202ENST00000390398 OVOS2A0A0J9YW53 1432 aa9.8□□□□□ -0.84
TRBV25-1-202ENST00000390398 OVOS2Q6IE36 1432 aa9.8□□□□□ -0.84
TRBV25-1-202ENST00000390398 TTC21AQ8NDW8 1320 aa9.8□□□□□ -0.84
TRBV25-1-202ENST00000390398 USP31Q70CQ4 1352 aa9.78□□□□□ -0.84
TRBV25-1-202ENST00000390398 MTHFSP49914 203 aa9.78□□□□□ -0.84
TRBV25-1-202ENST00000390398 SCAF1Q9H7N4 1312 aaKnown RBP9.78□□□□□ -0.84
TRBV25-1-202ENST00000390398 ALS2Q96Q42 1657 aa9.77□□□□□ -0.84
TRBV25-1-202ENST00000390398 FOXO3O43524 673 aa9.77□□□□□ -0.85
TRBV25-1-202ENST00000390398 FBLN1P23142 703 aa9.77□□□□□ -0.85
TRBV25-1-202ENST00000390398 COG3Q96JB2 828 aa9.77□□□□□ -0.85
TRBV25-1-202ENST00000390398 COL3A1P02461 1466 aaPredicted RBP9.77□□□□□ -0.85
TRBV25-1-202ENST00000390398 AATKQ6ZMQ8 1374 aa9.76□□□□□ -0.85
TRBV25-1-202ENST00000390398 SMG6Q86US8 1419 aaKnown RBP9.76□□□□□ -0.85
TRBV25-1-202ENST00000390398 PSME1Q06323 249 aa9.76□□□□□ -0.85
TRBV25-1-202ENST00000390398 PEAK1Q9H792 1746 aa9.76□□□□□ -0.85
TRBV25-1-202ENST00000390398 XPCQ01831 940 aaPredicted RBP9.75□□□□□ -0.85
TRBV25-1-202ENST00000390398 PIAS4Q8N2W9 510 aaPredicted RBP9.75□□□□□ -0.85
TRBV25-1-202ENST00000390398 POLKQ9UBT6 870 aa9.75□□□□□ -0.85
TRBV25-1-202ENST00000390398 LTN1O94822 1766 aa9.75□□□□□ -0.85
TRBV25-1-202ENST00000390398 PNPLA6Q8IY17 1366 aa9.75□□□□□ -0.85
TRBV25-1-202ENST00000390398 NHSL1Q5SYE7 1610 aa9.74□□□□□ -0.85
TRBV25-1-202ENST00000390398 BLMP54132 1417 aaPredicted RBP9.74□□□□□ -0.85
TRBV25-1-202ENST00000390398 PXDNQ92626 1479 aa9.74□□□□□ -0.85
TRBV25-1-202ENST00000390398 PAK3O75914 559 aaPredicted RBP9.74□□□□□ -0.85
TRBV25-1-202ENST00000390398 BRINP3Q76B58 766 aa9.74□□□□□ -0.85
TRBV25-1-202ENST00000390398 KRT28Q7Z3Y7 464 aa9.74□□□□□ -0.85
TRBV25-1-202ENST00000390398 ABTB2Q8N961 1025 aa9.74□□□□□ -0.85
TRBV25-1-202ENST00000390398 DDX17Q92841 729 aaKnown RBP9.74□□□□□ -0.85
TRBV25-1-202ENST00000390398 SLAIN2Q9P270 581 aa9.74□□□□□ -0.85
TRBV25-1-202ENST00000390398 INSRP06213 1382 aa9.74□□□□□ -0.85
TRBV25-1-202ENST00000390398 CDK12Q9NYV4 1490 aaPredicted RBP9.73□□□□□ -0.85
TRBV25-1-202ENST00000390398 NLRP6P59044 892 aa9.73□□□□□ -0.85
TRBV25-1-202ENST00000390398 HNRNPUQ00839 825 aaKnown RBP eCLIP9.73□□□□□ -0.85
TRBV25-1-202ENST00000390398 NUTM2GQ5VZR2 741 aa9.73□□□□□ -0.85
TRBV25-1-202ENST00000390398 ADAMTS8Q9UP79 889 aa9.73□□□□□ -0.85
TRBV25-1-202ENST00000390398 CRYBG1Q9Y4K1 1723 aa9.73□□□□□ -0.85
TRBV25-1-202ENST00000390398 SLIT3O75094 1523 aa9.72□□□□□ -0.85
TRBV25-1-202ENST00000390398 NFAT5O94916 1531 aa9.72□□□□□ -0.85
TRBV25-1-202ENST00000390398 RRS1Q15050 365 aaKnown RBP9.72□□□□□ -0.85
TRBV25-1-202ENST00000390398 WDR43Q15061 677 aaKnown RBP eCLIP9.72□□□□□ -0.85
TRBV25-1-202ENST00000390398 CFAP53Q96M91 514 aa9.72□□□□□ -0.85
TRBV25-1-202ENST00000390398 EMILIN1Q9Y6C2 1016 aa9.72□□□□□ -0.85
TRBV25-1-202ENST00000390398 NPHP3Q7Z494 1330 aa9.72□□□□□ -0.85
TRBV25-1-202ENST00000390398 SBNO1A3KN83 1393 aa9.72□□□□□ -0.85
TRBV25-1-202ENST00000390398 PHRF1Q9P1Y6 1649 aaKnown RBP9.71□□□□□ -0.85
TRBV25-1-202ENST00000390398 ROBO1Q9Y6N7 1651 aa9.71□□□□□ -0.85
TRBV25-1-202ENST00000390398 MED1Q15648 1581 aaPredicted RBP9.71□□□□□ -0.86
TRBV25-1-202ENST00000390398 PPM1GO15355 546 aaPredicted RBP9.7□□□□□ -0.86
TRBV25-1-202ENST00000390398 SOX12O15370 315 aa9.7□□□□□ -0.86
TRBV25-1-202ENST00000390398 MAP3K19Q56UN5 1328 aa9.7□□□□□ -0.86
TRBV25-1-202ENST00000390398 TNS3Q68CZ2 1445 aa9.7□□□□□ -0.86
TRBV25-1-202ENST00000390398 RGPD1P0DJD0 1748 aa9.7□□□□□ -0.86
TRBV25-1-202ENST00000390398 SENP3-EIF4A1A0A087X0R7 540 aa9.69□□□□□ -0.86
TRBV25-1-202ENST00000390398 DIAPH1O60610 1272 aaKnown RBP9.69□□□□□ -0.86
TRBV25-1-202ENST00000390398 USP19O94966 1318 aa9.69□□□□□ -0.86
TRBV25-1-202ENST00000390398 CENPBP07199 599 aaPredicted RBP9.69□□□□□ -0.86
TRBV25-1-202ENST00000390398 SOS2Q07890 1332 aaPredicted RBP9.69□□□□□ -0.86
TRBV25-1-202ENST00000390398 SPATA31A3Q5VYP0 1347 aa9.69□□□□□ -0.86
TRBV25-1-202ENST00000390398 RGPD5Q99666 1765 aa9.68□□□□□ -0.86
TRBV25-1-202ENST00000390398 ABCA3Q99758 1704 aa9.68□□□□□ -0.86
TRBV25-1-202ENST00000390398 ZBED9Q6R2W3 1325 aa9.68□□□□□ -0.86
TRBV25-1-202ENST00000390398 IL13P35225 146 aa9.68□□□□□ -0.86
TRBV25-1-202ENST00000390398 CCDC146Q8IYE0 955 aa9.68□□□□□ -0.86
TRBV25-1-202ENST00000390398 AHDC1Q5TGY3 1603 aaPredicted RBP9.67□□□□□ -0.86
TRBV25-1-202ENST00000390398 KIF24Q5T7B8 1368 aa9.67□□□□□ -0.86
TRBV25-1-202ENST00000390398 HSP90AB2PQ58FF8 381 aa9.67□□□□□ -0.86
TRBV25-1-202ENST00000390398 LMOD2Q6P5Q4 547 aa9.67□□□□□ -0.86
TRBV25-1-202ENST00000390398 KCNH5Q8NCM2 988 aa9.67□□□□□ -0.86
TRBV25-1-202ENST00000390398 RGPD2P0DJD1 1756 aa9.67□□□□□ -0.86
TRBV25-1-202ENST00000390398 IQSEC2Q5JU85 1478 aa9.66□□□□□ -0.86
TRBV25-1-202ENST00000390398 FLT4P35916 1363 aa9.66□□□□□ -0.86
TRBV25-1-202ENST00000390398 COL18A1P39060 1754 aa9.66□□□□□ -0.86
TRBV25-1-202ENST00000390398 U2SURPO15042 1029 aaKnown RBP9.66□□□□□ -0.86
TRBV25-1-202ENST00000390398 GCP02774 474 aa9.66□□□□□ -0.86
TRBV25-1-202ENST00000390398 U2AF1L5P0DN76 240 aaPredicted RBP9.66□□□□□ -0.86
TRBV25-1-202ENST00000390398 U2AF1Q01081 240 aaKnown RBP eCLIP9.66□□□□□ -0.86
TRBV25-1-202ENST00000390398 NUDCQ9Y266 331 aa9.66□□□□□ -0.86
TRBV25-1-202ENST00000390398 ARHGEF10O15013 1369 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms