RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 CREBRFQ8IUR6 639 aa15.86■□□□□ 0.13
PTPRN2-203ENST00000389418 CAMSAP2Q08AD1 1489 aa15.86■□□□□ 0.13
PTPRN2-203ENST00000389418 ERC2O15083 957 aa15.86■□□□□ 0.13
PTPRN2-203ENST00000389418 GOLGA6L3A6NEY3 463 aa15.86■□□□□ 0.13
PTPRN2-203ENST00000389418 CCDC61Q9Y6R9 512 aa15.86■□□□□ 0.13
PTPRN2-203ENST00000389418 NUP160Q12769 1436 aa15.86■□□□□ 0.13
PTPRN2-203ENST00000389418 ADGRL1O94910 1474 aa15.85■□□□□ 0.13
PTPRN2-203ENST00000389418 ANO2Q9NQ90 1003 aa15.85■□□□□ 0.13
PTPRN2-203ENST00000389418 ABCC5O15440 1437 aa15.85■□□□□ 0.13
PTPRN2-203ENST00000389418 FYB1O15117 783 aa15.85■□□□□ 0.13
PTPRN2-203ENST00000389418 CCDC30Q5VVM6 783 aa15.85■□□□□ 0.13
PTPRN2-203ENST00000389418 NME9Q86XW9 330 aa15.85■□□□□ 0.13
PTPRN2-203ENST00000389418 CCDC85AQ96PX6 553 aaPredicted RBP15.85■□□□□ 0.13
PTPRN2-203ENST00000389418 FANCIQ9NVI1 1328 aa15.85■□□□□ 0.13
PTPRN2-203ENST00000389418 AKAP17AQ02040 695 aaKnown RBP15.85■□□□□ 0.13
PTPRN2-203ENST00000389418 RASSF8Q8NHQ8 419 aa15.85■□□□□ 0.13
PTPRN2-203ENST00000389418 GNAI3P08754 354 aa15.85■□□□□ 0.13
PTPRN2-203ENST00000389418 ANO8Q9HCE9 1232 aaPredicted RBP15.85■□□□□ 0.13
PTPRN2-203ENST00000389418 AMOTL2Q9Y2J4 779 aa15.85■□□□□ 0.13
PTPRN2-203ENST00000389418 CT47B1P0C2W7 299 aaPredicted RBP15.84■□□□□ 0.13
PTPRN2-203ENST00000389418 MTMR7Q9Y216 660 aa15.84■□□□□ 0.13
PTPRN2-203ENST00000389418 SF3A1Q15459 793 aaKnown RBP15.84■□□□□ 0.13
PTPRN2-203ENST00000389418 DDX11L8A8MPP1 907 aa15.84■□□□□ 0.13
PTPRN2-203ENST00000389418 PTCD1O75127 700 aaKnown RBP15.84■□□□□ 0.13
PTPRN2-203ENST00000389418 TWISTNBQ3B726 338 aaPredicted RBP15.83■□□□□ 0.13
PTPRN2-203ENST00000389418 NUP153P49790 1475 aaKnown RBP15.83■□□□□ 0.13
PTPRN2-203ENST00000389418 FAM184AQ8NB25 1140 aa15.83■□□□□ 0.12
PTPRN2-203ENST00000389418 THOC2Q8NI27 1593 aaKnown RBP15.83■□□□□ 0.12
PTPRN2-203ENST00000389418 SLC4A2P04920 1241 aa15.83■□□□□ 0.12
PTPRN2-203ENST00000389418 TATP17735 454 aaPredicted RBP15.83■□□□□ 0.12
PTPRN2-203ENST00000389418 FOSBP53539 338 aa15.83■□□□□ 0.12
PTPRN2-203ENST00000389418 HDGFL1Q5TGJ6 251 aa15.83■□□□□ 0.12
PTPRN2-203ENST00000389418 KDM4AO75164 1064 aa15.83■□□□□ 0.12
PTPRN2-203ENST00000389418 RAPGEF6Q8TEU7 1601 aa15.82■□□□□ 0.12
PTPRN2-203ENST00000389418 AKNAQ7Z591 1439 aa15.82■□□□□ 0.12
PTPRN2-203ENST00000389418 UBTFL1P0CB47 393 aaPredicted RBP15.82■□□□□ 0.12
PTPRN2-203ENST00000389418 ABCA5Q8WWZ7 1642 aa15.82■□□□□ 0.12
PTPRN2-203ENST00000389418 PTPN23Q9H3S7 1636 aa15.82■□□□□ 0.12
PTPRN2-203ENST00000389418 H3BQV1 296 aa15.82■□□□□ 0.12
PTPRN2-203ENST00000389418 IFFO2Q5TF58 517 aa15.82■□□□□ 0.12
PTPRN2-203ENST00000389418 CTTNBP2Q8WZ74 1663 aa15.81■□□□□ 0.12
PTPRN2-203ENST00000389418 SURF6O75683 361 aaKnown RBP15.81■□□□□ 0.12
PTPRN2-203ENST00000389418 HMGB2P26583 209 aaKnown RBP15.81■□□□□ 0.12
PTPRN2-203ENST00000389418 HSPA2P54652 639 aa15.81■□□□□ 0.12
PTPRN2-203ENST00000389418 TRDNQ13061 729 aa15.81■□□□□ 0.12
PTPRN2-203ENST00000389418 EMILIN1Q9Y6C2 1016 aa15.81■□□□□ 0.12
PTPRN2-203ENST00000389418 SIL1Q9H173 461 aa15.8■□□□□ 0.12
PTPRN2-203ENST00000389418 INTS3Q68E01 1043 aaKnown RBP15.8■□□□□ 0.12
PTPRN2-203ENST00000389418 KIAA0556O60303 1618 aa15.8■□□□□ 0.12
PTPRN2-203ENST00000389418 MARCH6O60337 910 aa15.8■□□□□ 0.12
PTPRN2-203ENST00000389418 MCM10Q7L590 875 aa15.8■□□□□ 0.12
PTPRN2-203ENST00000389418 SKOR2Q2VWA4 1001 aaPredicted RBP15.79■□□□□ 0.12
PTPRN2-203ENST00000389418 NCOA1Q15788 1441 aa15.79■□□□□ 0.12
PTPRN2-203ENST00000389418 CABP4P57796 275 aa15.79■□□□□ 0.12
PTPRN2-203ENST00000389418 MCTP1Q6DN14 999 aa15.79■□□□□ 0.12
PTPRN2-203ENST00000389418 KAT6BQ8WYB5 2073 aa15.79■□□□□ 0.12
PTPRN2-203ENST00000389418 GPATCH8Q9UKJ3 1502 aaKnown RBP15.79■□□□□ 0.12
PTPRN2-203ENST00000389418 FANCAO15360 1455 aa15.79■□□□□ 0.12
PTPRN2-203ENST00000389418 DDX49Q9Y6V7 483 aaKnown RBP15.78■□□□□ 0.12
PTPRN2-203ENST00000389418 PDE3AQ14432 1141 aa15.78■□□□□ 0.12
PTPRN2-203ENST00000389418 BICDL1Q6ZP65 573 aa15.78■□□□□ 0.12
PTPRN2-203ENST00000389418 ASXL2Q76L83 1435 aa15.78■□□□□ 0.12
PTPRN2-203ENST00000389418 WDR63Q8IWG1 891 aa15.78■□□□□ 0.12
PTPRN2-203ENST00000389418 PDE4CQ08493 712 aa15.77■□□□□ 0.12
PTPRN2-203ENST00000389418 CCDC27Q2M243 656 aa15.77■□□□□ 0.12
PTPRN2-203ENST00000389418 WASHC4Q2M389 1173 aa15.77■□□□□ 0.12
PTPRN2-203ENST00000389418 DHX16O60231 1041 aaKnown RBP15.77■□□□□ 0.12
PTPRN2-203ENST00000389418 TRIM34Q9BYJ4 488 aa15.77■□□□□ 0.11
PTPRN2-203ENST00000389418 NOB1Q9ULX3 412 aaKnown RBP15.77■□□□□ 0.11
PTPRN2-203ENST00000389418 CHRNA2Q15822 529 aa15.76■□□□□ 0.11
PTPRN2-203ENST00000389418 STK11IPQ8N1F8 1099 aa15.76■□□□□ 0.11
PTPRN2-203ENST00000389418 SPG7Q9UQ90 795 aa15.76■□□□□ 0.11
PTPRN2-203ENST00000389418 TRIM29Q14134 588 aa15.76■□□□□ 0.11
PTPRN2-203ENST00000389418 TARBP1Q13395 1621 aaKnown RBP15.76■□□□□ 0.11
PTPRN2-203ENST00000389418 NSD3Q9BZ95 1437 aa15.76■□□□□ 0.11
PTPRN2-203ENST00000389418 NINLQ9Y2I6 1382 aa15.76■□□□□ 0.11
PTPRN2-203ENST00000389418 PBRM1Q86U86 1689 aa15.75■□□□□ 0.11
PTPRN2-203ENST00000389418 CLASRPQ8N2M8 674 aaKnown RBP15.75■□□□□ 0.11
PTPRN2-203ENST00000389418 KCNH5Q8NCM2 988 aa15.75■□□□□ 0.11
PTPRN2-203ENST00000389418 C22orf23Q9BZE7 217 aa15.75■□□□□ 0.11
PTPRN2-203ENST00000389418 CPLX1O14810 134 aa15.75■□□□□ 0.11
PTPRN2-203ENST00000389418 DENND4BO75064 1496 aaPredicted RBP15.74■□□□□ 0.11
PTPRN2-203ENST00000389418 DNAJC2Q99543 621 aaKnown RBP15.74■□□□□ 0.11
PTPRN2-203ENST00000389418 FCHSD2O94868 740 aa15.74■□□□□ 0.11
PTPRN2-203ENST00000389418 ERC1Q8IUD2 1116 aa15.73■□□□□ 0.11
PTPRN2-203ENST00000389418 PLCH2O75038 1416 aa15.73■□□□□ 0.11
PTPRN2-203ENST00000389418 DISP1Q96F81 1524 aa15.73■□□□□ 0.11
PTPRN2-203ENST00000389418 PHF8Q9UPP1 1060 aa15.73■□□□□ 0.11
PTPRN2-203ENST00000389418 KIF6Q6ZMV9 814 aa15.72■□□□□ 0.11
PTPRN2-203ENST00000389418 SKAP1Q86WV1 359 aa15.72■□□□□ 0.11
PTPRN2-203ENST00000389418 PDZRN3Q9UPQ7 1066 aa15.72■□□□□ 0.11
PTPRN2-203ENST00000389418 ERICH2A1L162 156 aa15.72■□□□□ 0.11
PTPRN2-203ENST00000389418 ARID3AQ99856 593 aa15.72■□□□□ 0.11
PTPRN2-203ENST00000389418 SPINK5Q9NQ38 1064 aaPredicted RBP15.72■□□□□ 0.11
PTPRN2-203ENST00000389418 MAP4K4O95819 1239 aaPredicted RBP15.71■□□□□ 0.11
PTPRN2-203ENST00000389418 GSE1Q14687 1217 aa15.71■□□□□ 0.11
PTPRN2-203ENST00000389418 CHMP5Q9NZZ3 219 aa15.71■□□□□ 0.11
PTPRN2-203ENST00000389418 CCT4P50991 539 aaKnown RBP15.71■□□□□ 0.11
PTPRN2-203ENST00000389418 MPRIPQ6WCQ1 1025 aa15.71■□□□□ 0.11
PTPRN2-203ENST00000389418 GCC1Q96CN9 775 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms