RNA–Protein interactions for RNA: ENST00000383991.1

RNU6-546P-201, Transcript of RNA, U6 small nuclear 546, pseudogene, humanhuman

BASIC

Gene RNU6-546P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-546P-201ENST00000383991 FMNL1O95466 1100 aaPredicted RBP3.9□□□□□ -1.79
RNU6-546P-201ENST00000383991 JUNDP17535 347 aa3.9□□□□□ -1.79
RNU6-546P-201ENST00000383991 PTPRNQ16849 979 aa3.9□□□□□ -1.79
RNU6-546P-201ENST00000383991 ADGRD1Q6QNK2 874 aa3.9□□□□□ -1.79
RNU6-546P-201ENST00000383991 PLEKHM2Q8IWE5 1019 aa3.9□□□□□ -1.79
RNU6-546P-201ENST00000383991 SCUBE3Q8IX30 993 aa3.9□□□□□ -1.79
RNU6-546P-201ENST00000383991 USP17L3A6NCW0 530 aa3.89□□□□□ -1.79
RNU6-546P-201ENST00000383991 USP17L4A6NCW7 530 aa3.89□□□□□ -1.79
RNU6-546P-201ENST00000383991 SOWAHBA6NEL2 793 aa3.89□□□□□ -1.79
RNU6-546P-201ENST00000383991 FAM205CA6NFA0 338 aa3.89□□□□□ -1.79
RNU6-546P-201ENST00000383991 NR1I2O75469 434 aa3.89□□□□□ -1.79
RNU6-546P-201ENST00000383991 APLP1P51693 650 aa3.89□□□□□ -1.79
RNU6-546P-201ENST00000383991 PPP4CP60510 307 aa3.89□□□□□ -1.79
RNU6-546P-201ENST00000383991 USP17L2Q6R6M4 530 aa3.89□□□□□ -1.79
RNU6-546P-201ENST00000383991 USP17L1Q7RTZ2 530 aa3.89□□□□□ -1.79
RNU6-546P-201ENST00000383991 ANKK1Q8NFD2 765 aa3.89□□□□□ -1.79
RNU6-546P-201ENST00000383991 MARVELD3Q96A59 401 aa3.89□□□□□ -1.79
RNU6-546P-201ENST00000383991 MAP10Q9P2G4 905 aa3.89□□□□□ -1.79
RNU6-546P-201ENST00000383991 ZMIZ1Q9ULJ6 1067 aa3.89□□□□□ -1.79
RNU6-546P-201ENST00000383991 GNEQ9Y223 722 aaKnown RBP3.89□□□□□ -1.79
RNU6-546P-201ENST00000383991 GPSM3Q9Y4H4 160 aa3.89□□□□□ -1.79
RNU6-546P-201ENST00000383991 IVNS1ABPQ9Y6Y0 642 aa3.89□□□□□ -1.79
RNU6-546P-201ENST00000383991 POTEB3A0JP26 581 aa3.88□□□□□ -1.79
RNU6-546P-201ENST00000383991 USP17L5A8MUK1 530 aa3.88□□□□□ -1.79
RNU6-546P-201ENST00000383991 SKIP12755 728 aa3.88□□□□□ -1.79
RNU6-546P-201ENST00000383991 MCCD1P59942 119 aaPredicted RBP3.88□□□□□ -1.79
RNU6-546P-201ENST00000383991 LSM11P83369 360 aaKnown RBP eCLIP3.88□□□□□ -1.79
RNU6-546P-201ENST00000383991 MSS51Q4VC12 460 aa3.88□□□□□ -1.79
RNU6-546P-201ENST00000383991 TMEM164Q5U3C3 297 aa3.88□□□□□ -1.79
RNU6-546P-201ENST00000383991 FOXD4L5Q5VV16 416 aaPredicted RBP3.88□□□□□ -1.79
RNU6-546P-201ENST00000383991 B4GALNT3Q6L9W6 998 aa3.88□□□□□ -1.79
RNU6-546P-201ENST00000383991 PDXDC2PQ6P474 469 aa3.88□□□□□ -1.79
RNU6-546P-201ENST00000383991 POTEBQ6S5H4 581 aa3.88□□□□□ -1.79
RNU6-546P-201ENST00000383991 SND1Q7KZF4 910 aaKnown RBP eCLIP3.88□□□□□ -1.79
RNU6-546P-201ENST00000383991 PHTF2Q8N3S3 785 aa3.88□□□□□ -1.79
RNU6-546P-201ENST00000383991 ARMC2Q8NEN0 867 aa3.88□□□□□ -1.79
RNU6-546P-201ENST00000383991 FAM174AQ8TBP5 190 aa3.88□□□□□ -1.79
RNU6-546P-201ENST00000383991 FOXD4L4Q8WXT5 416 aaPredicted RBP3.88□□□□□ -1.79
RNU6-546P-201ENST00000383991 ZNF592Q92610 1267 aa3.88□□□□□ -1.79
RNU6-546P-201ENST00000383991 GPKOWQ92917 476 aaPredicted RBP eCLIP3.88□□□□□ -1.79
RNU6-546P-201ENST00000383991 EVA1BQ9NVM1 165 aa3.88□□□□□ -1.79
RNU6-546P-201ENST00000383991 CEP126Q9P2H0 1117 aa3.88□□□□□ -1.79
RNU6-546P-201ENST00000383991 TSR3Q9UJK0 312 aaKnown RBP3.88□□□□□ -1.79
RNU6-546P-201ENST00000383991 HPS5Q9UPZ3 1129 aa3.88□□□□□ -1.79
RNU6-546P-201ENST00000383991 PCDHB3Q9Y5E6 796 aa3.88□□□□□ -1.79
RNU6-546P-201ENST00000383991 FAM196BA6NMK8 535 aa3.87□□□□□ -1.79
RNU6-546P-201ENST00000383991 GOLGA8CPA6NN73 597 aa3.87□□□□□ -1.79
RNU6-546P-201ENST00000383991 LZTS3O60299 673 aaPredicted RBP3.87□□□□□ -1.79
RNU6-546P-201ENST00000383991 DXOO77932 396 aaKnown RBP3.87□□□□□ -1.79
RNU6-546P-201ENST00000383991 CCNYL3P0C7X3 344 aa3.87□□□□□ -1.79
RNU6-546P-201ENST00000383991 CTHP32929 405 aa3.87□□□□□ -1.79
RNU6-546P-201ENST00000383991 MMP16P51512 607 aa3.87□□□□□ -1.79
RNU6-546P-201ENST00000383991 PTK2Q05397 1052 aa3.87□□□□□ -1.79
RNU6-546P-201ENST00000383991 KCNH2Q12809 1159 aa3.87□□□□□ -1.79
RNU6-546P-201ENST00000383991 FAM160A2Q8N612 972 aaPredicted RBP3.87□□□□□ -1.79
RNU6-546P-201ENST00000383991 STK32AQ8WU08 396 aa3.87□□□□□ -1.79
RNU6-546P-201ENST00000383991 HS3ST6Q96QI5 342 aa3.87□□□□□ -1.79
RNU6-546P-201ENST00000383991 OCSTAMPQ9BR26 566 aa3.87□□□□□ -1.79
RNU6-546P-201ENST00000383991 CHIC2Q9UKJ5 165 aa3.87□□□□□ -1.79
RNU6-546P-201ENST00000383991 NOVA2Q9UNW9 492 aaKnown RBP3.87□□□□□ -1.79
RNU6-546P-201ENST00000383991 BCAMP50895 628 aa3.86□□□□□ -1.79
RNU6-546P-201ENST00000383991 CCDC27Q2M243 656 aa3.86□□□□□ -1.79
RNU6-546P-201ENST00000383991 PHLDB3Q6NSJ2 640 aa3.86□□□□□ -1.79
RNU6-546P-201ENST00000383991 TXNDC2Q86VQ3 553 aa3.86□□□□□ -1.79
RNU6-546P-201ENST00000383991 DEPDC4Q8N2C3 294 aa3.86□□□□□ -1.79
RNU6-546P-201ENST00000383991 NUDT12Q9BQG2 462 aa3.86□□□□□ -1.79
RNU6-546P-201ENST00000383991 MKRN1Q9UHC7 482 aaKnown RBP3.86□□□□□ -1.79
RNU6-546P-201ENST00000383991 USP17L15C9J2P7 530 aa3.85□□□□□ -1.79
RNU6-546P-201ENST00000383991 USP17L10C9JJH3 530 aa3.85□□□□□ -1.79
RNU6-546P-201ENST00000383991 USP17L13C9JLJ4 530 aa3.85□□□□□ -1.79
RNU6-546P-201ENST00000383991 USP17L12C9JPN9 530 aa3.85□□□□□ -1.79
RNU6-546P-201ENST00000383991 USP17L11C9JVI0 530 aa3.85□□□□□ -1.79
RNU6-546P-201ENST00000383991 USP17L21D6R901 530 aa3.85□□□□□ -1.79
RNU6-546P-201ENST00000383991 USP17L18D6R9N7 530 aa3.85□□□□□ -1.79
RNU6-546P-201ENST00000383991 USP17L22D6RA61 530 aa3.85□□□□□ -1.79
RNU6-546P-201ENST00000383991 USP17L17D6RBQ6 530 aa3.85□□□□□ -1.79
RNU6-546P-201ENST00000383991 USP17L19D6RCP7 530 aa3.85□□□□□ -1.79
RNU6-546P-201ENST00000383991 USP17L20D6RJB6 530 aa3.85□□□□□ -1.79
RNU6-546P-201ENST00000383991 ATP5J2-PTCD1G3V325 749 aa3.85□□□□□ -1.79
RNU6-546P-201ENST00000383991 SSFA2P28290 1259 aa3.85□□□□□ -1.79
RNU6-546P-201ENST00000383991 FAM69CQ0P6D2 419 aa3.85□□□□□ -1.79
RNU6-546P-201ENST00000383991 USP17L24Q0WX57 530 aa3.85□□□□□ -1.79
RNU6-546P-201ENST00000383991 PTK7Q13308 1070 aa3.85□□□□□ -1.79
RNU6-546P-201ENST00000383991 MAP7D1Q3KQU3 841 aa3.85□□□□□ -1.79
RNU6-546P-201ENST00000383991 SLFNL1Q499Z3 407 aa3.85□□□□□ -1.79
RNU6-546P-201ENST00000383991 CRTC2Q53ET0 693 aaPredicted RBP3.85□□□□□ -1.79
RNU6-546P-201ENST00000383991 NBPF14Q5TI25 921 aa3.85□□□□□ -1.79
RNU6-546P-201ENST00000383991 LHX8Q68G74 356 aa3.85□□□□□ -1.79
RNU6-546P-201ENST00000383991 LARP1Q6PKG0 1096 aaKnown RBP3.85□□□□□ -1.79
RNU6-546P-201ENST00000383991 RNF135Q8IUD6 432 aa3.85□□□□□ -1.79
RNU6-546P-201ENST00000383991 CCER1Q8TC90 406 aaPredicted RBP3.85□□□□□ -1.79
RNU6-546P-201ENST00000383991 WNT2BQ93097 391 aa3.85□□□□□ -1.79
RNU6-546P-201ENST00000383991 STAC3Q96MF2 364 aa3.85□□□□□ -1.79
RNU6-546P-201ENST00000383991 SPSB2Q99619 263 aa3.85□□□□□ -1.79
RNU6-546P-201ENST00000383991 CDCA7Q9BWT1 371 aaPredicted RBP3.85□□□□□ -1.79
RNU6-546P-201ENST00000383991 AMOTL2Q9Y2J4 779 aa3.85□□□□□ -1.79
RNU6-546P-201ENST00000383991 PCDHB9Q9Y5E1 797 aa3.85□□□□□ -1.79
RNU6-546P-201ENST00000383991 RASA1P20936 1047 aa3.84□□□□□ -1.79
RNU6-546P-201ENST00000383991 RBM25P49756 843 aaKnown RBP3.84□□□□□ -1.79
RNU6-546P-201ENST00000383991 NCOA4Q13772 614 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms