RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 ERVK-7P63135 1459 aa18.58■□□□□ 0.56
CTNS-202ENST00000381870 TMEM57Q8N5G2 664 aa18.58■□□□□ 0.56
CTNS-202ENST00000381870 SSH1Q8WYL5 1049 aa18.58■□□□□ 0.56
CTNS-202ENST00000381870 RSPH4AQ5TD94 716 aa18.57■□□□□ 0.56
CTNS-202ENST00000381870 CHD1LQ86WJ1 897 aa18.57■□□□□ 0.56
CTNS-202ENST00000381870 LMBRD1Q9NUN5 540 aa18.57■□□□□ 0.56
CTNS-202ENST00000381870 CSPP1Q1MSJ5 1256 aa18.57■□□□□ 0.56
CTNS-202ENST00000381870 SASS6Q6UVJ0 657 aa18.57■□□□□ 0.56
CTNS-202ENST00000381870 ATF7IPQ6VMQ6 1270 aa18.57■□□□□ 0.56
CTNS-202ENST00000381870 ZBTB40Q9NUA8 1239 aa18.57■□□□□ 0.56
CTNS-202ENST00000381870 RBM27Q9P2N5 1060 aaKnown RBP18.57■□□□□ 0.56
CTNS-202ENST00000381870 NOB1Q9ULX3 412 aaKnown RBP18.57■□□□□ 0.56
CTNS-202ENST00000381870 EXOSC9Q06265 439 aaKnown RBP18.56■□□□□ 0.56
CTNS-202ENST00000381870 BMP2KLQ5H9B9 411 aa18.56■□□□□ 0.56
CTNS-202ENST00000381870 SYCP2Q9BX26 1530 aa18.56■□□□□ 0.56
CTNS-202ENST00000381870 TBC1D9Q6ZT07 1266 aa18.56■□□□□ 0.56
CTNS-202ENST00000381870 ARHGAP31Q2M1Z3 1444 aa18.55■□□□□ 0.56
CTNS-202ENST00000381870 PKP1Q13835 747 aa18.55■□□□□ 0.56
CTNS-202ENST00000381870 TTC37Q6PGP7 1564 aa18.55■□□□□ 0.56
CTNS-202ENST00000381870 CDC42BPBQ9Y5S2 1711 aa18.54■□□□□ 0.56
CTNS-202ENST00000381870 JARID2Q92833 1246 aaPredicted RBP18.54■□□□□ 0.56
CTNS-202ENST00000381870 CCDC94Q9BW85 323 aaPredicted RBP18.54■□□□□ 0.56
CTNS-202ENST00000381870 DMTNQ08495 405 aa18.54■□□□□ 0.56
CTNS-202ENST00000381870 ZBTB7CA1YPR0 619 aa18.53■□□□□ 0.56
CTNS-202ENST00000381870 MTHFSP49914 203 aa18.52■□□□□ 0.56
CTNS-202ENST00000381870 GPT2Q8TD30 523 aa18.52■□□□□ 0.56
CTNS-202ENST00000381870 MAST1Q9Y2H9 1570 aa18.52■□□□□ 0.56
CTNS-202ENST00000381870 DUOX2Q9NRD8 1548 aa18.52■□□□□ 0.56
CTNS-202ENST00000381870 NSD3Q9BZ95 1437 aa18.52■□□□□ 0.56
CTNS-202ENST00000381870 ZSCAN20P17040 1043 aaPredicted RBP18.52■□□□□ 0.56
CTNS-202ENST00000381870 SPHKAPQ2M3C7 1700 aa18.52■□□□□ 0.55
CTNS-202ENST00000381870 KIF16BQ96L93 1317 aa18.51■□□□□ 0.55
CTNS-202ENST00000381870 PRPF40AO75400 957 aaKnown RBP18.51■□□□□ 0.55
CTNS-202ENST00000381870 MCM5P33992 734 aa18.51■□□□□ 0.55
CTNS-202ENST00000381870 ANKRD45Q5TZF3 282 aa18.51■□□□□ 0.55
CTNS-202ENST00000381870 CYP2E1P05181 493 aaPredicted RBP18.5■□□□□ 0.55
CTNS-202ENST00000381870 CFAP70Q5T0N1 1121 aa18.5■□□□□ 0.55
CTNS-202ENST00000381870 UTP14CQ5TAP6 766 aaKnown RBP18.5■□□□□ 0.55
CTNS-202ENST00000381870 CCDC39Q9UFE4 941 aa18.5■□□□□ 0.55
CTNS-202ENST00000381870 CFAP74Q9C0B2 1584 aa18.5■□□□□ 0.55
CTNS-202ENST00000381870 TSC1Q92574 1164 aa18.5■□□□□ 0.55
CTNS-202ENST00000381870 CT47B1P0C2W7 299 aaPredicted RBP18.49■□□□□ 0.55
CTNS-202ENST00000381870 U2AF1L5P0DN76 240 aaPredicted RBP18.49■□□□□ 0.55
CTNS-202ENST00000381870 U2AF1Q01081 240 aaKnown RBP eCLIP18.49■□□□□ 0.55
CTNS-202ENST00000381870 CHAMP1Q96JM3 812 aa18.49■□□□□ 0.55
CTNS-202ENST00000381870 PREX2Q70Z35 1606 aa18.49■□□□□ 0.55
CTNS-202ENST00000381870 NPM1P06748 294 aaKnown RBP eCLIP18.49■□□□□ 0.55
CTNS-202ENST00000381870 SYCE3A1L190 88 aa18.48■□□□□ 0.55
CTNS-202ENST00000381870 NUCB2P80303 420 aa18.48■□□□□ 0.55
CTNS-202ENST00000381870 ZNF518AQ6AHZ1 1483 aa18.48■□□□□ 0.55
CTNS-202ENST00000381870 RIMBP3CA6NJZ7 1639 aa18.48■□□□□ 0.55
CTNS-202ENST00000381870 RIMBP3BA6NNM3 1639 aa18.48■□□□□ 0.55
CTNS-202ENST00000381870 RIMBP3Q9UFD9 1639 aa18.48■□□□□ 0.55
CTNS-202ENST00000381870 FGD1P98174 961 aa18.48■□□□□ 0.55
CTNS-202ENST00000381870 TMEM63CQ9P1W3 806 aa18.48■□□□□ 0.55
CTNS-202ENST00000381870 LRSAM1Q6UWE0 723 aa18.47■□□□□ 0.55
CTNS-202ENST00000381870 RNF214Q8ND24 703 aa18.47■□□□□ 0.55
CTNS-202ENST00000381870 NSFL1CQ9UNZ2 370 aaKnown RBP18.47■□□□□ 0.55
CTNS-202ENST00000381870 CFAP53Q96M91 514 aa18.46■□□□□ 0.55
CTNS-202ENST00000381870 SLC12A5Q9H2X9 1139 aa18.46■□□□□ 0.55
CTNS-202ENST00000381870 ZNF710Q8N1W2 664 aa18.45■□□□□ 0.54
CTNS-202ENST00000381870 C1orf115Q9H7X2 142 aa18.45■□□□□ 0.54
CTNS-202ENST00000381870 NOS1P29475 1434 aa18.45■□□□□ 0.54
CTNS-202ENST00000381870 MYRIPQ8NFW9 859 aa18.45■□□□□ 0.54
CTNS-202ENST00000381870 CBX1P83916 185 aa18.44■□□□□ 0.54
CTNS-202ENST00000381870 ZGPATQ8N5A5 531 aaKnown RBP18.44■□□□□ 0.54
CTNS-202ENST00000381870 PPIP5K1Q6PFW1 1433 aa18.43■□□□□ 0.54
CTNS-202ENST00000381870 KIAA2012Q0VF49 1180 aa18.43■□□□□ 0.54
CTNS-202ENST00000381870 ZDHHC9Q9Y397 364 aa18.43■□□□□ 0.54
CTNS-202ENST00000381870 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.43■□□□□ 0.54
CTNS-202ENST00000381870 ARHGAP5Q13017 1502 aa18.43■□□□□ 0.54
CTNS-202ENST00000381870 PTPRTO14522 1441 aa18.43■□□□□ 0.54
CTNS-202ENST00000381870 RABEP1Q15276 862 aa18.43■□□□□ 0.54
CTNS-202ENST00000381870 DNTTIP2Q5QJE6 756 aaKnown RBP18.43■□□□□ 0.54
CTNS-202ENST00000381870 STAC3Q96MF2 364 aa18.43■□□□□ 0.54
CTNS-202ENST00000381870 TRIM35Q9UPQ4 493 aa18.43■□□□□ 0.54
CTNS-202ENST00000381870 SLC24A1O60721 1099 aa18.42■□□□□ 0.54
CTNS-202ENST00000381870 CDC45O75419 566 aa18.42■□□□□ 0.54
CTNS-202ENST00000381870 PTMAP06454 111 aaKnown RBP18.42■□□□□ 0.54
CTNS-202ENST00000381870 MPNDQ8N594 471 aa18.42■□□□□ 0.54
CTNS-202ENST00000381870 CLTCL1P53675 1640 aa18.42■□□□□ 0.54
CTNS-202ENST00000381870 TRPM2O94759 1503 aa18.41■□□□□ 0.54
CTNS-202ENST00000381870 FAM177BA6PVY3 158 aa18.41■□□□□ 0.54
CTNS-202ENST00000381870 NCBP3Q53F19 620 aaKnown RBP18.41■□□□□ 0.54
CTNS-202ENST00000381870 CD109Q6YHK3 1445 aa18.41■□□□□ 0.54
CTNS-202ENST00000381870 IPO8O15397 1037 aaKnown RBP18.41■□□□□ 0.54
CTNS-202ENST00000381870 ADGRB2O60241 1585 aa18.4■□□□□ 0.54
CTNS-202ENST00000381870 GSPT1P15170 499 aaKnown RBP18.4■□□□□ 0.54
CTNS-202ENST00000381870 GCC1Q96CN9 775 aa18.4■□□□□ 0.54
CTNS-202ENST00000381870 ADGRF5Q8IZF2 1346 aa18.4■□□□□ 0.54
CTNS-202ENST00000381870 TMPOP42166 694 aaKnown RBP18.4■□□□□ 0.54
CTNS-202ENST00000381870 ATP2B3Q16720 1220 aa18.4■□□□□ 0.54
CTNS-202ENST00000381870 FOXD4L5Q5VV16 416 aaPredicted RBP18.4■□□□□ 0.54
CTNS-202ENST00000381870 FOXD4L4Q8WXT5 416 aaPredicted RBP18.4■□□□□ 0.54
CTNS-202ENST00000381870 ZNF830Q96NB3 372 aaPredicted RBP18.39■□□□□ 0.53
CTNS-202ENST00000381870 ABCC11Q96J66 1382 aa18.38■□□□□ 0.53
CTNS-202ENST00000381870 ZBTB7BO15156 539 aaPredicted RBP18.38■□□□□ 0.53
CTNS-202ENST00000381870 PPP4R3BQ5MIZ7 849 aa18.38■□□□□ 0.53
CTNS-202ENST00000381870 SIRT2Q8IXJ6 389 aa18.38■□□□□ 0.53
CTNS-202ENST00000381870 CWC22Q9HCG8 908 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms