RNA–Protein interactions for RNA: ENST00000379538.7

SNCAIP-203, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-203ENST00000379538 RRAGDQ9NQL2 400 aaPredicted RBP17.88■□□□□ 0.45
SNCAIP-203ENST00000379538 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.88■□□□□ 0.45
SNCAIP-203ENST00000379538 GGNBP2Q9H3C7 697 aa17.87■□□□□ 0.45
SNCAIP-203ENST00000379538 DUSP27Q5VZP5 1158 aa17.86■□□□□ 0.45
SNCAIP-203ENST00000379538 A0A1W2PP64 1363 aa17.86■□□□□ 0.45
SNCAIP-203ENST00000379538 WASLO00401 505 aaPredicted RBP17.86■□□□□ 0.45
SNCAIP-203ENST00000379538 PPP2R1AP30153 589 aa17.86■□□□□ 0.45
SNCAIP-203ENST00000379538 FAM43AQ8N2R8 423 aa17.86■□□□□ 0.45
SNCAIP-203ENST00000379538 DIP2AQ14689 1571 aa17.85■□□□□ 0.45
SNCAIP-203ENST00000379538 TBX22Q9Y458 520 aa17.85■□□□□ 0.45
SNCAIP-203ENST00000379538 PRR36Q9H6K5 1346 aa17.84■□□□□ 0.45
SNCAIP-203ENST00000379538 SPINK5Q9NQ38 1064 aaPredicted RBP17.84■□□□□ 0.45
SNCAIP-203ENST00000379538 BCAR3O75815 825 aa17.84■□□□□ 0.45
SNCAIP-203ENST00000379538 CCDC146Q8IYE0 955 aa17.84■□□□□ 0.45
SNCAIP-203ENST00000379538 NUDT16Q96DE0 195 aaKnown RBP17.84■□□□□ 0.45
SNCAIP-203ENST00000379538 IGHDP01880 384 aa17.83■□□□□ 0.44
SNCAIP-203ENST00000379538 ZRANB1Q9UGI0 708 aa17.83■□□□□ 0.44
SNCAIP-203ENST00000379538 USP19O94966 1318 aa17.83■□□□□ 0.44
SNCAIP-203ENST00000379538 SLC24A1O60721 1099 aa17.83■□□□□ 0.44
SNCAIP-203ENST00000379538 PMFBP1Q8TBY8 1022 aa17.83■□□□□ 0.44
SNCAIP-203ENST00000379538 RSPH6AQ9H0K4 717 aa17.83■□□□□ 0.44
SNCAIP-203ENST00000379538 MED14O60244 1454 aa17.82■□□□□ 0.44
SNCAIP-203ENST00000379538 SPRYD3Q8NCJ5 442 aa17.82■□□□□ 0.44
SNCAIP-203ENST00000379538 BLMP54132 1417 aaPredicted RBP17.81■□□□□ 0.44
SNCAIP-203ENST00000379538 MORC1Q86VD1 984 aa17.81■□□□□ 0.44
SNCAIP-203ENST00000379538 KNDC1Q76NI1 1749 aa17.79■□□□□ 0.44
SNCAIP-203ENST00000379538 CD163L1Q9NR16 1453 aa17.78■□□□□ 0.44
SNCAIP-203ENST00000379538 ANKRD36BQ8N2N9 1353 aa17.78■□□□□ 0.44
SNCAIP-203ENST00000379538 FYB1O15117 783 aa17.78■□□□□ 0.44
SNCAIP-203ENST00000379538 GZF1Q9H116 711 aaPredicted RBP17.78■□□□□ 0.44
SNCAIP-203ENST00000379538 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.78■□□□□ 0.44
SNCAIP-203ENST00000379538 PLEKHG5O94827 1062 aa17.77■□□□□ 0.43
SNCAIP-203ENST00000379538 GOLGA2Q08379 1002 aa17.77■□□□□ 0.43
SNCAIP-203ENST00000379538 CGNL1Q0VF96 1302 aa17.76■□□□□ 0.43
SNCAIP-203ENST00000379538 PPIP5K1Q6PFW1 1433 aa17.76■□□□□ 0.43
SNCAIP-203ENST00000379538 DMRT2Q9Y5R5 561 aa17.76■□□□□ 0.43
SNCAIP-203ENST00000379538 ATAD2Q6PL18 1390 aa17.76■□□□□ 0.43
SNCAIP-203ENST00000379538 TECPR2O15040 1411 aa17.76■□□□□ 0.43
SNCAIP-203ENST00000379538 SOX12O15370 315 aa17.76■□□□□ 0.43
SNCAIP-203ENST00000379538 NME9Q86XW9 330 aa17.76■□□□□ 0.43
SNCAIP-203ENST00000379538 TERF2IPQ9NYB0 399 aa17.76■□□□□ 0.43
SNCAIP-203ENST00000379538 CCDC61Q9Y6R9 512 aa17.76■□□□□ 0.43
SNCAIP-203ENST00000379538 DLC1Q96QB1 1528 aa17.76■□□□□ 0.43
SNCAIP-203ENST00000379538 WDR43Q15061 677 aaKnown RBP eCLIP17.75■□□□□ 0.43
SNCAIP-203ENST00000379538 PANK2Q9BZ23 570 aa17.75■□□□□ 0.43
SNCAIP-203ENST00000379538 MTHFSP49914 203 aa17.74■□□□□ 0.43
SNCAIP-203ENST00000379538 HDGFL2Q7Z4V5 671 aaPredicted RBP17.74■□□□□ 0.43
SNCAIP-203ENST00000379538 C14orf37Q86TY3 774 aa17.74■□□□□ 0.43
SNCAIP-203ENST00000379538 FAM135BQ49AJ0 1406 aa17.74■□□□□ 0.43
SNCAIP-203ENST00000379538 PANK1Q8TE04 598 aa17.72■□□□□ 0.43
SNCAIP-203ENST00000379538 NPHP4O75161 1426 aaPredicted RBP17.72■□□□□ 0.43
SNCAIP-203ENST00000379538 CPS1P31327 1500 aa17.72■□□□□ 0.43
SNCAIP-203ENST00000379538 APAF1O14727 1248 aa17.72■□□□□ 0.43
SNCAIP-203ENST00000379538 SLFN5Q08AF3 891 aa17.71■□□□□ 0.43
SNCAIP-203ENST00000379538 COG6Q9Y2V7 657 aa17.71■□□□□ 0.43
SNCAIP-203ENST00000379538 ACEP12821 1306 aa17.71■□□□□ 0.43
SNCAIP-203ENST00000379538 NUTM2GQ5VZR2 741 aa17.71■□□□□ 0.43
SNCAIP-203ENST00000379538 PUS7Q96PZ0 661 aaKnown RBP17.71■□□□□ 0.43
SNCAIP-203ENST00000379538 ZNF521Q96K83 1311 aa17.71■□□□□ 0.42
SNCAIP-203ENST00000379538 SIRT1Q96EB6 747 aa17.7■□□□□ 0.42
SNCAIP-203ENST00000379538 XRCC6P12956 609 aaKnown RBP eCLIP17.7■□□□□ 0.42
SNCAIP-203ENST00000379538 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.69■□□□□ 0.42
SNCAIP-203ENST00000379538 NAP1L5Q96NT1 182 aaPredicted RBP17.69■□□□□ 0.42
SNCAIP-203ENST00000379538 ATP7BP35670 1465 aa17.69■□□□□ 0.42
SNCAIP-203ENST00000379538 XPCQ01831 940 aaPredicted RBP17.68■□□□□ 0.42
SNCAIP-203ENST00000379538 PIK3R4Q99570 1358 aa17.68■□□□□ 0.42
SNCAIP-203ENST00000379538 TNNQ9UQP3 1299 aa17.67■□□□□ 0.42
SNCAIP-203ENST00000379538 LMTK3Q96Q04 1460 aa17.67■□□□□ 0.42
SNCAIP-203ENST00000379538 ANTXR1Q9H6X2 564 aa17.67■□□□□ 0.42
SNCAIP-203ENST00000379538 NPC1L1Q9UHC9 1359 aa17.66■□□□□ 0.42
SNCAIP-203ENST00000379538 RRS1Q15050 365 aaKnown RBP17.66■□□□□ 0.42
SNCAIP-203ENST00000379538 PROSER2Q86WR7 435 aaPredicted RBP17.66■□□□□ 0.42
SNCAIP-203ENST00000379538 NGDNQ8NEJ9 315 aaKnown RBP17.66■□□□□ 0.42
SNCAIP-203ENST00000379538 NKTRP30414 1462 aaKnown RBP17.66■□□□□ 0.42
SNCAIP-203ENST00000379538 XRN1Q8IZH2 1706 aaKnown RBP17.65■□□□□ 0.42
SNCAIP-203ENST00000379538 TBC1D2Q9BYX2 928 aa17.65■□□□□ 0.42
SNCAIP-203ENST00000379538 RGPD8O14715 1765 aaPredicted RBP17.64■□□□□ 0.42
SNCAIP-203ENST00000379538 NEUROD2Q15784 382 aa17.64■□□□□ 0.41
SNCAIP-203ENST00000379538 ORAI2Q96SN7 254 aa17.64■□□□□ 0.41
SNCAIP-203ENST00000379538 EMILIN1Q9Y6C2 1016 aa17.64■□□□□ 0.41
SNCAIP-203ENST00000379538 VSIG10Q8N0Z9 540 aa17.64■□□□□ 0.41
SNCAIP-203ENST00000379538 PKNOX2Q96KN3 472 aa17.64■□□□□ 0.41
SNCAIP-203ENST00000379538 NWD1Q149M9 1564 aa17.64■□□□□ 0.41
SNCAIP-203ENST00000379538 CHD2O14647 1828 aaKnown RBP17.64■□□□□ 0.41
SNCAIP-203ENST00000379538 PTCH1Q13635 1447 aa17.63■□□□□ 0.41
SNCAIP-203ENST00000379538 CPSF1Q10570 1443 aaKnown RBP17.63■□□□□ 0.41
SNCAIP-203ENST00000379538 BECN1Q14457 450 aa17.63■□□□□ 0.41
SNCAIP-203ENST00000379538 ESCO1Q5FWF5 840 aa17.63■□□□□ 0.41
SNCAIP-203ENST00000379538 RRP7AQ9Y3A4 280 aaKnown RBP17.63■□□□□ 0.41
SNCAIP-203ENST00000379538 CANXP27824 592 aaKnown RBP17.62■□□□□ 0.41
SNCAIP-203ENST00000379538 DDX17Q92841 729 aaKnown RBP17.62■□□□□ 0.41
SNCAIP-203ENST00000379538 BCL2L13Q9BXK5 485 aa17.62■□□□□ 0.41
SNCAIP-203ENST00000379538 NINLQ9Y2I6 1382 aa17.61■□□□□ 0.41
SNCAIP-203ENST00000379538 U2SURPO15042 1029 aaKnown RBP17.61■□□□□ 0.41
SNCAIP-203ENST00000379538 CLUAP1Q96AJ1 413 aa17.6■□□□□ 0.41
SNCAIP-203ENST00000379538 STRCQ7RTU9 1775 aa17.6■□□□□ 0.41
SNCAIP-203ENST00000379538 L1TD1Q5T7N2 865 aaKnown RBP17.6■□□□□ 0.41
SNCAIP-203ENST00000379538 TRMT2AQ8IZ69 625 aaKnown RBP17.6■□□□□ 0.41
SNCAIP-203ENST00000379538 GOLGA6L3A6NEY3 463 aa17.59■□□□□ 0.41
SNCAIP-203ENST00000379538 FOXO3O43524 673 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms