RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 JAKMIP3Q5VZ66 844 aa13.34□□□□□ -0.27
PTCHD1-201ENST00000379361 CCDC150Q8NCX0 1101 aa13.34□□□□□ -0.27
PTCHD1-201ENST00000379361 PPFIBP1Q86W92 1011 aa13.33□□□□□ -0.28
PTCHD1-201ENST00000379361 JMYQ8N9B5 988 aa13.33□□□□□ -0.28
PTCHD1-201ENST00000379361 AXDND1Q5T1B0 1012 aaPredicted RBP13.33□□□□□ -0.28
PTCHD1-201ENST00000379361 PDCP20941 246 aa13.33□□□□□ -0.28
PTCHD1-201ENST00000379361 NF2P35240 595 aa13.33□□□□□ -0.28
PTCHD1-201ENST00000379361 FAM161AQ3B820 660 aa13.33□□□□□ -0.28
PTCHD1-201ENST00000379361 DACH1Q9UI36 760 aa13.33□□□□□ -0.28
PTCHD1-201ENST00000379361 TSPYL4Q9UJ04 414 aa13.33□□□□□ -0.28
PTCHD1-201ENST00000379361 LETM1O95202 739 aaPredicted RBP13.32□□□□□ -0.28
PTCHD1-201ENST00000379361 RRP7AQ9Y3A4 280 aaKnown RBP13.32□□□□□ -0.28
PTCHD1-201ENST00000379361 NECTIN2Q92692 538 aa13.32□□□□□ -0.28
PTCHD1-201ENST00000379361 MPHOSPH9Q99550 1183 aa13.32□□□□□ -0.28
PTCHD1-201ENST00000379361 PPP1R12BO60237 982 aaPredicted RBP13.32□□□□□ -0.28
PTCHD1-201ENST00000379361 CCDC66A2RUB6 948 aa13.32□□□□□ -0.28
PTCHD1-201ENST00000379361 SKIDA1Q1XH10 827 aa13.32□□□□□ -0.28
PTCHD1-201ENST00000379361 ZHX3Q9H4I2 956 aa13.32□□□□□ -0.28
PTCHD1-201ENST00000379361 CCDC39Q9UFE4 941 aa13.31□□□□□ -0.28
PTCHD1-201ENST00000379361 GIGYF2Q6Y7W6 1299 aaKnown RBP13.31□□□□□ -0.28
PTCHD1-201ENST00000379361 TMOD2Q9NZR1 351 aa13.31□□□□□ -0.28
PTCHD1-201ENST00000379361 HSP90AB3PQ58FF7 597 aa13.31□□□□□ -0.28
PTCHD1-201ENST00000379361 TRIM22Q8IYM9 498 aa13.31□□□□□ -0.28
PTCHD1-201ENST00000379361 PABPN1LA6NDY0 278 aaKnown RBP13.31□□□□□ -0.28
PTCHD1-201ENST00000379361 SSR1P43307 286 aaKnown RBP13.31□□□□□ -0.28
PTCHD1-201ENST00000379361 PLIN1O60240 522 aa13.3□□□□□ -0.28
PTCHD1-201ENST00000379361 TANGO6Q9C0B7 1094 aa13.3□□□□□ -0.28
PTCHD1-201ENST00000379361 CCDC158Q5M9N0 1113 aa13.3□□□□□ -0.28
PTCHD1-201ENST00000379361 CENPHQ9H3R5 247 aa13.3□□□□□ -0.28
PTCHD1-201ENST00000379361 UBTFL1P0CB47 393 aaPredicted RBP13.3□□□□□ -0.28
PTCHD1-201ENST00000379361 NACAP1Q9BZK3 213 aa13.3□□□□□ -0.28
PTCHD1-201ENST00000379361 GPRASP1Q5JY77 1395 aa13.29□□□□□ -0.28
PTCHD1-201ENST00000379361 CETN2P41208 172 aa13.29□□□□□ -0.28
PTCHD1-201ENST00000379361 NLRP2Q9NX02 1062 aa13.29□□□□□ -0.28
PTCHD1-201ENST00000379361 SOGA3Q5TF21 947 aa13.29□□□□□ -0.28
PTCHD1-201ENST00000379361 SMARCA2P51531 1590 aa13.29□□□□□ -0.28
PTCHD1-201ENST00000379361 FSD1Q9BTV5 496 aa13.28□□□□□ -0.28
PTCHD1-201ENST00000379361 FAM13BQ9NYF5 915 aa13.28□□□□□ -0.28
PTCHD1-201ENST00000379361 CEP63Q96MT8 703 aa13.28□□□□□ -0.28
PTCHD1-201ENST00000379361 TTC39AQ5SRH9 613 aa13.28□□□□□ -0.28
PTCHD1-201ENST00000379361 MYBBP1AQ9BQG0 1328 aaKnown RBP13.28□□□□□ -0.28
PTCHD1-201ENST00000379361 BAZ2BQ9UIF8 2168 aaKnown RBP13.27□□□□□ -0.29
PTCHD1-201ENST00000379361 EIF3JO75822 258 aaKnown RBP13.27□□□□□ -0.29
PTCHD1-201ENST00000379361 TRIM5Q9C035 493 aa13.27□□□□□ -0.29
PTCHD1-201ENST00000379361 NOL7Q9UMY1 257 aaKnown RBP13.26□□□□□ -0.29
PTCHD1-201ENST00000379361 PANK3Q9H999 370 aa13.26□□□□□ -0.29
PTCHD1-201ENST00000379361 TAX1BP1Q86VP1 789 aa13.26□□□□□ -0.29
PTCHD1-201ENST00000379361 COMMD10Q9Y6G5 202 aa13.26□□□□□ -0.29
PTCHD1-201ENST00000379361 SCLT1Q96NL6 688 aa13.26□□□□□ -0.29
PTCHD1-201ENST00000379361 SEC63Q9UGP8 760 aaKnown RBP13.26□□□□□ -0.29
PTCHD1-201ENST00000379361 CCDC69A6NI79 296 aa13.26□□□□□ -0.29
PTCHD1-201ENST00000379361 BRPF1P55201 1214 aaPredicted RBP13.26□□□□□ -0.29
PTCHD1-201ENST00000379361 GNAI1P63096 354 aa13.26□□□□□ -0.29
PTCHD1-201ENST00000379361 AIMP1Q12904 312 aaKnown RBP13.26□□□□□ -0.29
PTCHD1-201ENST00000379361 FERMT1Q9BQL6 677 aa13.26□□□□□ -0.29
PTCHD1-201ENST00000379361 ZNF76P36508 570 aa13.26□□□□□ -0.29
PTCHD1-201ENST00000379361 FAM43AQ8N2R8 423 aa13.26□□□□□ -0.29
PTCHD1-201ENST00000379361 CCDC57Q2TAC2 916 aa13.26□□□□□ -0.29
PTCHD1-201ENST00000379361 ANKRD18BA2A2Z9 1011 aa13.26□□□□□ -0.29
PTCHD1-201ENST00000379361 CFAP57Q96MR6 1250 aa13.25□□□□□ -0.29
PTCHD1-201ENST00000379361 MPHOSPH8Q99549 860 aa13.25□□□□□ -0.29
PTCHD1-201ENST00000379361 HOOK3Q86VS8 718 aa13.25□□□□□ -0.29
PTCHD1-201ENST00000379361 CDKL5O76039 1030 aa13.25□□□□□ -0.29
PTCHD1-201ENST00000379361 RIPK4P57078 832 aa13.25□□□□□ -0.29
PTCHD1-201ENST00000379361 CNNM1Q9NRU3 951 aa13.25□□□□□ -0.29
PTCHD1-201ENST00000379361 ELL2O00472 640 aaPredicted RBP13.25□□□□□ -0.29
PTCHD1-201ENST00000379361 FERP16591 822 aa13.25□□□□□ -0.29
PTCHD1-201ENST00000379361 GOLGA6L10A0A0M3HER8 536 aa13.25□□□□□ -0.29
PTCHD1-201ENST00000379361 DIAPH1O60610 1272 aaKnown RBP13.24□□□□□ -0.29
PTCHD1-201ENST00000379361 SSX2IPQ9Y2D8 614 aa13.24□□□□□ -0.29
PTCHD1-201ENST00000379361 CBFA2T2O43439 604 aa13.24□□□□□ -0.29
PTCHD1-201ENST00000379361 DZIP1LQ8IYY4 767 aaKnown RBP13.24□□□□□ -0.29
PTCHD1-201ENST00000379361 BCL2L13Q9BXK5 485 aa13.24□□□□□ -0.29
PTCHD1-201ENST00000379361 SPATA24Q86W54 205 aa13.24□□□□□ -0.29
PTCHD1-201ENST00000379361 GAS2L2Q8NHY3 880 aa13.24□□□□□ -0.29
PTCHD1-201ENST00000379361 AAMPQ13685 434 aa13.23□□□□□ -0.29
PTCHD1-201ENST00000379361 MPHOSPH6Q99547 160 aaKnown RBP13.23□□□□□ -0.29
PTCHD1-201ENST00000379361 DDX23Q9BUQ8 820 aaKnown RBP13.23□□□□□ -0.29
PTCHD1-201ENST00000379361 MCM2P49736 904 aa13.23□□□□□ -0.29
PTCHD1-201ENST00000379361 NASPP49321 788 aaPredicted RBP13.22□□□□□ -0.29
PTCHD1-201ENST00000379361 MINK1Q8N4C8 1332 aaPredicted RBP13.22□□□□□ -0.29
PTCHD1-201ENST00000379361 URB1O60287 2271 aaKnown RBP13.22□□□□□ -0.29
PTCHD1-201ENST00000379361 ZNF397Q8NF99 534 aaPredicted RBP13.22□□□□□ -0.29
PTCHD1-201ENST00000379361 SERPINC1P01008 464 aa13.22□□□□□ -0.29
PTCHD1-201ENST00000379361 ZSCAN25Q6NSZ9 544 aa13.22□□□□□ -0.29
PTCHD1-201ENST00000379361 ZNF287Q9HBT7 754 aa13.22□□□□□ -0.29
PTCHD1-201ENST00000379361 PLEKHO1Q53GL0 409 aaPredicted RBP13.22□□□□□ -0.29
PTCHD1-201ENST00000379361 STRN4Q9NRL3 753 aa13.22□□□□□ -0.29
PTCHD1-201ENST00000379361 PAXIP1Q6ZW49 1069 aaPredicted RBP13.21□□□□□ -0.29
PTCHD1-201ENST00000379361 LRRCC1Q9C099 1032 aa13.21□□□□□ -0.29
PTCHD1-201ENST00000379361 ANKRD12Q6UB98 2062 aa13.21□□□□□ -0.29
PTCHD1-201ENST00000379361 CEP131Q9UPN4 1083 aa13.21□□□□□ -0.29
PTCHD1-201ENST00000379361 MBD3O95983 291 aa13.21□□□□□ -0.3
PTCHD1-201ENST00000379361 ANKRD1Q15327 319 aa13.21□□□□□ -0.3
PTCHD1-201ENST00000379361 LRRC45Q96CN5 670 aa13.21□□□□□ -0.3
PTCHD1-201ENST00000379361 USP8P40818 1118 aa13.21□□□□□ -0.3
PTCHD1-201ENST00000379361 VPS36Q86VN1 386 aa13.21□□□□□ -0.3
PTCHD1-201ENST00000379361 IBSPP21815 317 aaPredicted RBP13.2□□□□□ -0.3
PTCHD1-201ENST00000379361 ERLIN1O75477 346 aa13.2□□□□□ -0.3
PTCHD1-201ENST00000379361 CDC45O75419 566 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms