RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 JAKMIP3Q5VZ66 844 aa13.34□□□□□ -0.27
PTCHD1-201ENST00000379361 CCDC150Q8NCX0 1101 aa13.34□□□□□ -0.27
PTCHD1-201ENST00000379361 PPFIBP1Q86W92 1011 aa13.33□□□□□ -0.28
PTCHD1-201ENST00000379361 JMYQ8N9B5 988 aa13.33□□□□□ -0.28
PTCHD1-201ENST00000379361 AXDND1Q5T1B0 1012 aaPredicted RBP13.33□□□□□ -0.28
PTCHD1-201ENST00000379361 PDCP20941 246 aa13.33□□□□□ -0.28
PTCHD1-201ENST00000379361 NF2P35240 595 aa13.33□□□□□ -0.28
PTCHD1-201ENST00000379361 FAM161AQ3B820 660 aa13.33□□□□□ -0.28
PTCHD1-201ENST00000379361 DACH1Q9UI36 760 aa13.33□□□□□ -0.28
PTCHD1-201ENST00000379361 TSPYL4Q9UJ04 414 aa13.33□□□□□ -0.28
PTCHD1-201ENST00000379361 LETM1O95202 739 aaPredicted RBP13.32□□□□□ -0.28
PTCHD1-201ENST00000379361 RRP7AQ9Y3A4 280 aaKnown RBP13.32□□□□□ -0.28
PTCHD1-201ENST00000379361 NECTIN2Q92692 538 aa13.32□□□□□ -0.28
PTCHD1-201ENST00000379361 MPHOSPH9Q99550 1183 aa13.32□□□□□ -0.28
PTCHD1-201ENST00000379361 PPP1R12BO60237 982 aaPredicted RBP13.32□□□□□ -0.28
PTCHD1-201ENST00000379361 CCDC66A2RUB6 948 aa13.32□□□□□ -0.28
PTCHD1-201ENST00000379361 SKIDA1Q1XH10 827 aa13.32□□□□□ -0.28
PTCHD1-201ENST00000379361 ZHX3Q9H4I2 956 aa13.32□□□□□ -0.28
PTCHD1-201ENST00000379361 CCDC39Q9UFE4 941 aa13.31□□□□□ -0.28
PTCHD1-201ENST00000379361 GIGYF2Q6Y7W6 1299 aaKnown RBP13.31□□□□□ -0.28
PTCHD1-201ENST00000379361 TMOD2Q9NZR1 351 aa13.31□□□□□ -0.28
PTCHD1-201ENST00000379361 HSP90AB3PQ58FF7 597 aa13.31□□□□□ -0.28
PTCHD1-201ENST00000379361 TRIM22Q8IYM9 498 aa13.31□□□□□ -0.28
PTCHD1-201ENST00000379361 PABPN1LA6NDY0 278 aaKnown RBP13.31□□□□□ -0.28
PTCHD1-201ENST00000379361 SSR1P43307 286 aaKnown RBP13.31□□□□□ -0.28
PTCHD1-201ENST00000379361 PLIN1O60240 522 aa13.3□□□□□ -0.28
PTCHD1-201ENST00000379361 TANGO6Q9C0B7 1094 aa13.3□□□□□ -0.28
PTCHD1-201ENST00000379361 CCDC158Q5M9N0 1113 aa13.3□□□□□ -0.28
PTCHD1-201ENST00000379361 CENPHQ9H3R5 247 aa13.3□□□□□ -0.28
PTCHD1-201ENST00000379361 UBTFL1P0CB47 393 aaPredicted RBP13.3□□□□□ -0.28
PTCHD1-201ENST00000379361 NACAP1Q9BZK3 213 aa13.3□□□□□ -0.28
PTCHD1-201ENST00000379361 GPRASP1Q5JY77 1395 aa13.29□□□□□ -0.28
PTCHD1-201ENST00000379361 CETN2P41208 172 aa13.29□□□□□ -0.28
PTCHD1-201ENST00000379361 NLRP2Q9NX02 1062 aa13.29□□□□□ -0.28
PTCHD1-201ENST00000379361 SOGA3Q5TF21 947 aa13.29□□□□□ -0.28
PTCHD1-201ENST00000379361 SMARCA2P51531 1590 aa13.29□□□□□ -0.28
PTCHD1-201ENST00000379361 FSD1Q9BTV5 496 aa13.28□□□□□ -0.28
PTCHD1-201ENST00000379361 FAM13BQ9NYF5 915 aa13.28□□□□□ -0.28
PTCHD1-201ENST00000379361 CEP63Q96MT8 703 aa13.28□□□□□ -0.28
PTCHD1-201ENST00000379361 TTC39AQ5SRH9 613 aa13.28□□□□□ -0.28
PTCHD1-201ENST00000379361 MYBBP1AQ9BQG0 1328 aaKnown RBP13.28□□□□□ -0.28
PTCHD1-201ENST00000379361 BAZ2BQ9UIF8 2168 aaKnown RBP13.27□□□□□ -0.29
PTCHD1-201ENST00000379361 EIF3JO75822 258 aaKnown RBP13.27□□□□□ -0.29
PTCHD1-201ENST00000379361 TRIM5Q9C035 493 aa13.27□□□□□ -0.29
PTCHD1-201ENST00000379361 NOL7Q9UMY1 257 aaKnown RBP13.26□□□□□ -0.29
PTCHD1-201ENST00000379361 PANK3Q9H999 370 aa13.26□□□□□ -0.29
PTCHD1-201ENST00000379361 TAX1BP1Q86VP1 789 aa13.26□□□□□ -0.29
PTCHD1-201ENST00000379361 COMMD10Q9Y6G5 202 aa13.26□□□□□ -0.29
PTCHD1-201ENST00000379361 SCLT1Q96NL6 688 aa13.26□□□□□ -0.29
PTCHD1-201ENST00000379361 SEC63Q9UGP8 760 aaKnown RBP13.26□□□□□ -0.29
PTCHD1-201ENST00000379361 CCDC69A6NI79 296 aa13.26□□□□□ -0.29
PTCHD1-201ENST00000379361 BRPF1P55201 1214 aaPredicted RBP13.26□□□□□ -0.29
PTCHD1-201ENST00000379361 GNAI1P63096 354 aa13.26□□□□□ -0.29
PTCHD1-201ENST00000379361 AIMP1Q12904 312 aaKnown RBP13.26□□□□□ -0.29
PTCHD1-201ENST00000379361 FERMT1Q9BQL6 677 aa13.26□□□□□ -0.29
PTCHD1-201ENST00000379361 ZNF76P36508 570 aa13.26□□□□□ -0.29
PTCHD1-201ENST00000379361 FAM43AQ8N2R8 423 aa13.26□□□□□ -0.29
PTCHD1-201ENST00000379361 CCDC57Q2TAC2 916 aa13.26□□□□□ -0.29
PTCHD1-201ENST00000379361 ANKRD18BA2A2Z9 1011 aa13.26□□□□□ -0.29
PTCHD1-201ENST00000379361 CFAP57Q96MR6 1250 aa13.25□□□□□ -0.29
PTCHD1-201ENST00000379361 MPHOSPH8Q99549 860 aa13.25□□□□□ -0.29
PTCHD1-201ENST00000379361 HOOK3Q86VS8 718 aa13.25□□□□□ -0.29
PTCHD1-201ENST00000379361 CDKL5O76039 1030 aa13.25□□□□□ -0.29
PTCHD1-201ENST00000379361 RIPK4P57078 832 aa13.25□□□□□ -0.29
PTCHD1-201ENST00000379361 CNNM1Q9NRU3 951 aa13.25□□□□□ -0.29
PTCHD1-201ENST00000379361 ELL2O00472 640 aaPredicted RBP13.25□□□□□ -0.29
PTCHD1-201ENST00000379361 FERP16591 822 aa13.25□□□□□ -0.29
PTCHD1-201ENST00000379361 GOLGA6L10A0A0M3HER8 536 aa13.25□□□□□ -0.29
PTCHD1-201ENST00000379361 DIAPH1O60610 1272 aaKnown RBP13.24□□□□□ -0.29
PTCHD1-201ENST00000379361 SSX2IPQ9Y2D8 614 aa13.24□□□□□ -0.29
PTCHD1-201ENST00000379361 CBFA2T2O43439 604 aa13.24□□□□□ -0.29
PTCHD1-201ENST00000379361 DZIP1LQ8IYY4 767 aaKnown RBP13.24□□□□□ -0.29
PTCHD1-201ENST00000379361 BCL2L13Q9BXK5 485 aa13.24□□□□□ -0.29
PTCHD1-201ENST00000379361 SPATA24Q86W54 205 aa13.24□□□□□ -0.29
PTCHD1-201ENST00000379361 GAS2L2Q8NHY3 880 aa13.24□□□□□ -0.29
PTCHD1-201ENST00000379361 AAMPQ13685 434 aa13.23□□□□□ -0.29
PTCHD1-201ENST00000379361 MPHOSPH6Q99547 160 aaKnown RBP13.23□□□□□ -0.29
PTCHD1-201ENST00000379361 DDX23Q9BUQ8 820 aaKnown RBP13.23□□□□□ -0.29
PTCHD1-201ENST00000379361 MCM2P49736 904 aa13.23□□□□□ -0.29
PTCHD1-201ENST00000379361 NASPP49321 788 aaPredicted RBP13.22□□□□□ -0.29
PTCHD1-201ENST00000379361 MINK1Q8N4C8 1332 aaPredicted RBP13.22□□□□□ -0.29
PTCHD1-201ENST00000379361 URB1O60287 2271 aaKnown RBP13.22□□□□□ -0.29
PTCHD1-201ENST00000379361 ZNF397Q8NF99 534 aaPredicted RBP13.22□□□□□ -0.29
PTCHD1-201ENST00000379361 SERPINC1P01008 464 aa13.22□□□□□ -0.29
PTCHD1-201ENST00000379361 ZSCAN25Q6NSZ9 544 aa13.22□□□□□ -0.29
PTCHD1-201ENST00000379361 ZNF287Q9HBT7 754 aa13.22□□□□□ -0.29
PTCHD1-201ENST00000379361 PLEKHO1Q53GL0 409 aaPredicted RBP13.22□□□□□ -0.29
PTCHD1-201ENST00000379361 STRN4Q9NRL3 753 aa13.22□□□□□ -0.29
PTCHD1-201ENST00000379361 PAXIP1Q6ZW49 1069 aaPredicted RBP13.21□□□□□ -0.29
PTCHD1-201ENST00000379361 LRRCC1Q9C099 1032 aa13.21□□□□□ -0.29
PTCHD1-201ENST00000379361 ANKRD12Q6UB98 2062 aa13.21□□□□□ -0.29
PTCHD1-201ENST00000379361 CEP131Q9UPN4 1083 aa13.21□□□□□ -0.29
PTCHD1-201ENST00000379361 MBD3O95983 291 aa13.21□□□□□ -0.3
PTCHD1-201ENST00000379361 ANKRD1Q15327 319 aa13.21□□□□□ -0.3
PTCHD1-201ENST00000379361 LRRC45Q96CN5 670 aa13.21□□□□□ -0.3
PTCHD1-201ENST00000379361 USP8P40818 1118 aa13.21□□□□□ -0.3
PTCHD1-201ENST00000379361 VPS36Q86VN1 386 aa13.21□□□□□ -0.3
PTCHD1-201ENST00000379361 IBSPP21815 317 aaPredicted RBP13.2□□□□□ -0.3
PTCHD1-201ENST00000379361 ERLIN1O75477 346 aa13.2□□□□□ -0.3
PTCHD1-201ENST00000379361 CDC45O75419 566 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms