RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 BRD4O60885 1362 aaPredicted RBP9.74□□□□□ -0.85
GPCPD1-201ENST00000379019 RLBP1P12271 317 aa9.73□□□□□ -0.85
GPCPD1-201ENST00000379019 SHPRHQ149N8 1683 aa9.73□□□□□ -0.85
GPCPD1-201ENST00000379019 RGS3P49796 1198 aa9.73□□□□□ -0.85
GPCPD1-201ENST00000379019 PANK3Q9H999 370 aa9.73□□□□□ -0.85
GPCPD1-201ENST00000379019 AMOTL2Q9Y2J4 779 aa9.73□□□□□ -0.85
GPCPD1-201ENST00000379019 ATF3P18847 181 aa9.73□□□□□ -0.85
GPCPD1-201ENST00000379019 YTHDC2Q9H6S0 1430 aaKnown RBP9.72□□□□□ -0.85
GPCPD1-201ENST00000379019 BLMP54132 1417 aaPredicted RBP9.72□□□□□ -0.85
GPCPD1-201ENST00000379019 ERBB4Q15303 1308 aa9.72□□□□□ -0.85
GPCPD1-201ENST00000379019 ANP32AP39687 249 aaKnown RBP9.72□□□□□ -0.85
GPCPD1-201ENST00000379019 ROBO1Q9Y6N7 1651 aa9.71□□□□□ -0.85
GPCPD1-201ENST00000379019 MYBBP1AQ9BQG0 1328 aaKnown RBP9.71□□□□□ -0.85
GPCPD1-201ENST00000379019 NALCNQ8IZF0 1738 aa9.71□□□□□ -0.85
GPCPD1-201ENST00000379019 ADGRB1O14514 1584 aa9.71□□□□□ -0.86
GPCPD1-201ENST00000379019 FMN2Q9NZ56 1722 aa9.71□□□□□ -0.86
GPCPD1-201ENST00000379019 METP08581 1390 aa9.7□□□□□ -0.86
GPCPD1-201ENST00000379019 SLC26A8Q96RN1 970 aa9.7□□□□□ -0.86
GPCPD1-201ENST00000379019 GSE1Q14687 1217 aa9.7□□□□□ -0.86
GPCPD1-201ENST00000379019 SPATA31A6Q5VVP1 1343 aa9.7□□□□□ -0.86
GPCPD1-201ENST00000379019 ASXL1Q8IXJ9 1541 aa9.7□□□□□ -0.86
GPCPD1-201ENST00000379019 MST1RQ04912 1400 aa9.7□□□□□ -0.86
GPCPD1-201ENST00000379019 SPRYD3Q8NCJ5 442 aa9.7□□□□□ -0.86
GPCPD1-201ENST00000379019 PHLPP1O60346 1717 aa9.7□□□□□ -0.86
GPCPD1-201ENST00000379019 ITSN1Q15811 1721 aa9.69□□□□□ -0.86
GPCPD1-201ENST00000379019 ANTXR1Q9H6X2 564 aa9.69□□□□□ -0.86
GPCPD1-201ENST00000379019 JCADQ9P266 1359 aa9.69□□□□□ -0.86
GPCPD1-201ENST00000379019 COL22A1Q8NFW1 1626 aaPredicted RBP9.69□□□□□ -0.86
GPCPD1-201ENST00000379019 COL16A1Q07092 1604 aaPredicted RBP9.68□□□□□ -0.86
GPCPD1-201ENST00000379019 CARD14Q9BXL6 1004 aa9.68□□□□□ -0.86
GPCPD1-201ENST00000379019 PANK1Q8TE04 598 aa9.68□□□□□ -0.86
GPCPD1-201ENST00000379019 AMER1Q5JTC6 1135 aaPredicted RBP9.67□□□□□ -0.86
GPCPD1-201ENST00000379019 BCL2L13Q9BXK5 485 aa9.67□□□□□ -0.86
GPCPD1-201ENST00000379019 SENP3Q9H4L4 574 aaPredicted RBP9.67□□□□□ -0.86
GPCPD1-201ENST00000379019 SLAIN2Q9P270 581 aa9.67□□□□□ -0.86
GPCPD1-201ENST00000379019 PCDHB15Q9Y5E8 787 aa9.67□□□□□ -0.86
GPCPD1-201ENST00000379019 SLKQ9H2G2 1235 aaPredicted RBP9.67□□□□□ -0.86
GPCPD1-201ENST00000379019 CHAMP1Q96JM3 812 aa9.66□□□□□ -0.86
GPCPD1-201ENST00000379019 C1orf167Q5SNV9 1468 aa9.66□□□□□ -0.86
GPCPD1-201ENST00000379019 PUS7Q96PZ0 661 aaKnown RBP9.66□□□□□ -0.86
GPCPD1-201ENST00000379019 TULP4Q9NRJ4 1543 aa9.66□□□□□ -0.86
GPCPD1-201ENST00000379019 ROCK2O75116 1388 aaKnown RBP9.66□□□□□ -0.86
GPCPD1-201ENST00000379019 ADGRF5Q8IZF2 1346 aa9.66□□□□□ -0.86
GPCPD1-201ENST00000379019 GPRASP1Q5JY77 1395 aa9.65□□□□□ -0.86
GPCPD1-201ENST00000379019 MED1Q15648 1581 aaPredicted RBP9.65□□□□□ -0.86
GPCPD1-201ENST00000379019 C14orf37Q86TY3 774 aa9.65□□□□□ -0.86
GPCPD1-201ENST00000379019 ARHGEF28Q8N1W1 1705 aaKnown RBP9.65□□□□□ -0.86
GPCPD1-201ENST00000379019 ROBO2Q9HCK4 1378 aa9.65□□□□□ -0.86
GPCPD1-201ENST00000379019 SBNO2Q9Y2G9 1366 aa9.65□□□□□ -0.86
GPCPD1-201ENST00000379019 TCERG1O14776 1098 aaKnown RBP9.64□□□□□ -0.87
GPCPD1-201ENST00000379019 CD2BP2O95400 341 aaKnown RBP9.64□□□□□ -0.87
GPCPD1-201ENST00000379019 RRP7AQ9Y3A4 280 aaKnown RBP9.64□□□□□ -0.87
GPCPD1-201ENST00000379019 SBNO1A3KN83 1393 aa9.64□□□□□ -0.87
GPCPD1-201ENST00000379019 TRMT2AQ8IZ69 625 aaKnown RBP9.63□□□□□ -0.87
GPCPD1-201ENST00000379019 NPHP3Q7Z494 1330 aa9.63□□□□□ -0.87
GPCPD1-201ENST00000379019 EIF5BO60841 1220 aaKnown RBP9.63□□□□□ -0.87
GPCPD1-201ENST00000379019 ATP7BP35670 1465 aa9.63□□□□□ -0.87
GPCPD1-201ENST00000379019 APAF1O14727 1248 aa9.62□□□□□ -0.87
GPCPD1-201ENST00000379019 PPP2R1AP30153 589 aa9.62□□□□□ -0.87
GPCPD1-201ENST00000379019 NLRP13Q86W25 1043 aa9.62□□□□□ -0.87
GPCPD1-201ENST00000379019 PSME1Q06323 249 aa9.62□□□□□ -0.87
GPCPD1-201ENST00000379019 UBE2Q2Q8WVN8 375 aa9.62□□□□□ -0.87
GPCPD1-201ENST00000379019 LRRC59Q96AG4 307 aaKnown RBP9.62□□□□□ -0.87
GPCPD1-201ENST00000379019 GAS2L3Q86XJ1 694 aa9.61□□□□□ -0.87
GPCPD1-201ENST00000379019 CDK12Q9NYV4 1490 aaPredicted RBP9.61□□□□□ -0.87
GPCPD1-201ENST00000379019 TOPAZ1Q8N9V7 1692 aa9.61□□□□□ -0.87
GPCPD1-201ENST00000379019 NINLQ9Y2I6 1382 aa9.61□□□□□ -0.87
GPCPD1-201ENST00000379019 COG6Q9Y2V7 657 aa9.61□□□□□ -0.87
GPCPD1-201ENST00000379019 ARHGEF10O15013 1369 aa9.61□□□□□ -0.87
GPCPD1-201ENST00000379019 KTN1Q86UP2 1357 aaKnown RBP9.61□□□□□ -0.87
GPCPD1-201ENST00000379019 FBLN1P23142 703 aa9.6□□□□□ -0.87
GPCPD1-201ENST00000379019 XRCC6P12956 609 aaKnown RBP eCLIP9.6□□□□□ -0.872e-6■■■■□ 25.1
GPCPD1-201ENST00000379019 SOS2Q07890 1332 aaPredicted RBP9.6□□□□□ -0.87
GPCPD1-201ENST00000379019 HSPA1LP34931 641 aa9.6□□□□□ -0.87
GPCPD1-201ENST00000379019 JARID2Q92833 1246 aaPredicted RBP9.6□□□□□ -0.87
GPCPD1-201ENST00000379019 GZF1Q9H116 711 aaPredicted RBP9.6□□□□□ -0.87
GPCPD1-201ENST00000379019 INSRP06213 1382 aa9.6□□□□□ -0.87
GPCPD1-201ENST00000379019 RTL5Q5HYW3 569 aaPredicted RBP9.59□□□□□ -0.87
GPCPD1-201ENST00000379019 SLFN5Q08AF3 891 aa9.59□□□□□ -0.87
GPCPD1-201ENST00000379019 BRINP3Q76B58 766 aa9.59□□□□□ -0.87
GPCPD1-201ENST00000379019 USP34Q70CQ2 3546 aa9.59□□□□□ -0.87
GPCPD1-201ENST00000379019 PXDNQ92626 1479 aa9.58□□□□□ -0.88
GPCPD1-201ENST00000379019 CLUAP1Q96AJ1 413 aa9.58□□□□□ -0.88
GPCPD1-201ENST00000379019 ZNF692Q9BU19 519 aaPredicted RBP9.58□□□□□ -0.88
GPCPD1-201ENST00000379019 PIP4K2BP78356 416 aa9.58□□□□□ -0.88
GPCPD1-201ENST00000379019 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.58□□□□□ -0.88
GPCPD1-201ENST00000379019 ABCC6O95255 1503 aa9.58□□□□□ -0.88
GPCPD1-201ENST00000379019 TBC1D2Q9BYX2 928 aa9.57□□□□□ -0.88
GPCPD1-201ENST00000379019 TNNT2P45379 298 aaPredicted RBP9.57□□□□□ -0.88
GPCPD1-201ENST00000379019 QRICH2Q9H0J4 1663 aa9.57□□□□□ -0.88
GPCPD1-201ENST00000379019 NEUROD2Q15784 382 aa9.57□□□□□ -0.88
GPCPD1-201ENST00000379019 CENPFP49454 3210 aa9.56□□□□□ -0.88
GPCPD1-201ENST00000379019 MS4A1P11836 297 aa9.56□□□□□ -0.88
GPCPD1-201ENST00000379019 CFAP70Q5T0N1 1121 aa9.56□□□□□ -0.88
GPCPD1-201ENST00000379019 NUTM2DQ5VT03 806 aaPredicted RBP9.56□□□□□ -0.88
GPCPD1-201ENST00000379019 ZNF772Q68DY9 489 aaPredicted RBP9.56□□□□□ -0.88
GPCPD1-201ENST00000379019 MARF1Q9Y4F3 1742 aaKnown RBP9.56□□□□□ -0.88
GPCPD1-201ENST00000379019 ATAD2Q6PL18 1390 aa9.56□□□□□ -0.88
GPCPD1-201ENST00000379019 PNPLA6Q8IY17 1366 aa9.56□□□□□ -0.88
GPCPD1-201ENST00000379019 TNS3Q68CZ2 1445 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms