RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 TRPM3Q9HCF6 1732 aaPredicted RBP21.5■■□□□ 1.03
CCDC107-204ENST00000378409 FOXO3O43524 673 aa21.5■■□□□ 1.03
CCDC107-204ENST00000378409 PSME1Q06323 249 aa21.5■■□□□ 1.03
CCDC107-204ENST00000378409 ROBO1Q9Y6N7 1651 aa21.5■■□□□ 1.03
CCDC107-204ENST00000378409 NSD2O96028 1365 aa21.49■■□□□ 1.03
CCDC107-204ENST00000378409 SSH2Q76I76 1423 aa21.49■■□□□ 1.03
CCDC107-204ENST00000378409 BRINP3Q76B58 766 aa21.49■■□□□ 1.03
CCDC107-204ENST00000378409 PIK3C2AO00443 1686 aa21.49■■□□□ 1.03
CCDC107-204ENST00000378409 TTC21BQ7Z4L5 1316 aa21.49■■□□□ 1.03
CCDC107-204ENST00000378409 NHSL1Q5SYE7 1610 aa21.48■■□□□ 1.03
CCDC107-204ENST00000378409 PARD3Q8TEW0 1356 aa21.48■■□□□ 1.03
CCDC107-204ENST00000378409 GGNBP2Q9H3C7 697 aa21.47■■□□□ 1.03
CCDC107-204ENST00000378409 BRD4O60885 1362 aaPredicted RBP21.47■■□□□ 1.03
CCDC107-204ENST00000378409 FYB1O15117 783 aa21.46■■□□□ 1.03
CCDC107-204ENST00000378409 XPCQ01831 940 aaPredicted RBP21.46■■□□□ 1.03
CCDC107-204ENST00000378409 RALBP1Q15311 655 aa21.46■■□□□ 1.03
CCDC107-204ENST00000378409 NME9Q86XW9 330 aa21.46■■□□□ 1.03
CCDC107-204ENST00000378409 TTC21AQ8NDW8 1320 aa21.46■■□□□ 1.03
CCDC107-204ENST00000378409 PAK3O75914 559 aaPredicted RBP21.45■■□□□ 1.02
CCDC107-204ENST00000378409 KRT28Q7Z3Y7 464 aa21.45■■□□□ 1.02
CCDC107-204ENST00000378409 DDX17Q92841 729 aaKnown RBP21.45■■□□□ 1.02
CCDC107-204ENST00000378409 NPHP3Q7Z494 1330 aa21.45■■□□□ 1.02
CCDC107-204ENST00000378409 MARF1Q9Y4F3 1742 aaKnown RBP21.44■■□□□ 1.02
CCDC107-204ENST00000378409 MORC1Q86VD1 984 aa21.44■■□□□ 1.02
CCDC107-204ENST00000378409 USP54Q70EL1 1684 aa21.44■■□□□ 1.02
CCDC107-204ENST00000378409 TOM1O60784 492 aa21.43■■□□□ 1.02
CCDC107-204ENST00000378409 PXDNQ92626 1479 aa21.43■■□□□ 1.02
CCDC107-204ENST00000378409 ALS2Q96Q42 1657 aa21.43■■□□□ 1.02
CCDC107-204ENST00000378409 ZRANB1Q9UGI0 708 aa21.42■■□□□ 1.02
CCDC107-204ENST00000378409 MYBBP1AQ9BQG0 1328 aaKnown RBP21.4■■□□□ 1.02
CCDC107-204ENST00000378409 UBAP1LF5GYI3 381 aa21.4■■□□□ 1.02
CCDC107-204ENST00000378409 MAP2P11137 1827 aaKnown RBP21.4■■□□□ 1.02
CCDC107-204ENST00000378409 OVOS2A0A0J9YW53 1432 aa21.39■■□□□ 1.02
CCDC107-204ENST00000378409 OVOS2Q6IE36 1432 aa21.39■■□□□ 1.02
CCDC107-204ENST00000378409 TNNT2P45379 298 aaPredicted RBP21.39■■□□□ 1.01
CCDC107-204ENST00000378409 ABTB2Q8N961 1025 aa21.39■■□□□ 1.01
CCDC107-204ENST00000378409 COG3Q96JB2 828 aa21.39■■□□□ 1.01
CCDC107-204ENST00000378409 AHDC1Q5TGY3 1603 aaPredicted RBP21.38■■□□□ 1.01
CCDC107-204ENST00000378409 SBNO1A3KN83 1393 aa21.37■■□□□ 1.01
CCDC107-204ENST00000378409 SCAF1Q9H7N4 1312 aaKnown RBP21.37■■□□□ 1.01
CCDC107-204ENST00000378409 PIP4K2BP78356 416 aa21.37■■□□□ 1.01
CCDC107-204ENST00000378409 NUTM2GQ5VZR2 741 aa21.37■■□□□ 1.01
CCDC107-204ENST00000378409 PHLPP1O60346 1717 aa21.37■■□□□ 1.01
CCDC107-204ENST00000378409 USP31Q70CQ4 1352 aa21.36■■□□□ 1.01
CCDC107-204ENST00000378409 PPP2R1AP30153 589 aa21.36■■□□□ 1.01
CCDC107-204ENST00000378409 NLRP6P59044 892 aa21.36■■□□□ 1.01
CCDC107-204ENST00000378409 LMOD2Q6P5Q4 547 aa21.36■■□□□ 1.01
CCDC107-204ENST00000378409 TNS3Q68CZ2 1445 aa21.36■■□□□ 1.01
CCDC107-204ENST00000378409 SOS2Q07890 1332 aaPredicted RBP21.35■■□□□ 1.01
CCDC107-204ENST00000378409 CCER2I3L3R5 266 aa21.35■■□□□ 1.01
CCDC107-204ENST00000378409 SPATA31A3Q5VYP0 1347 aa21.32■■□□□ 1
CCDC107-204ENST00000378409 NLRP13Q86W25 1043 aa21.32■■□□□ 1
CCDC107-204ENST00000378409 LTN1O94822 1766 aa21.31■■□□□ 1
CCDC107-204ENST00000378409 PHRF1Q9P1Y6 1649 aaKnown RBP21.31■■□□□ 1
CCDC107-204ENST00000378409 CRYBG1Q9Y4K1 1723 aa21.31■■□□□ 1
CCDC107-204ENST00000378409 ARHGEF10O15013 1369 aa21.3■■□□□ 1
CCDC107-204ENST00000378409 COL16A1Q07092 1604 aaPredicted RBP21.29■■□□□ 1
CCDC107-204ENST00000378409 SOX12O15370 315 aa21.29■■□□□ 1
CCDC107-204ENST00000378409 CCDC184Q52MB2 194 aa21.29■■□□□ 1
CCDC107-204ENST00000378409 MRS2Q9HD23 443 aa21.29■■□□□ 1
CCDC107-204ENST00000378409 SLIT3O75094 1523 aa21.29■■□□□ 1
CCDC107-204ENST00000378409 MED1Q15648 1581 aaPredicted RBP21.28■■□□□ 1
CCDC107-204ENST00000378409 AATKQ6ZMQ8 1374 aa21.28■■□□□ 1
CCDC107-204ENST00000378409 PLEKHG5O94827 1062 aa21.28■■□□□ 1
CCDC107-204ENST00000378409 FBLN1P23142 703 aa21.28■■□□□ 1
CCDC107-204ENST00000378409 ABCA3Q99758 1704 aa21.28■■□□□ 1
CCDC107-204ENST00000378409 NFAT5O94916 1531 aa21.26■□□□□ 0.99
CCDC107-204ENST00000378409 USP19O94966 1318 aa21.26■□□□□ 0.99
CCDC107-204ENST00000378409 MTHFSP49914 203 aa21.25■□□□□ 0.99
CCDC107-204ENST00000378409 PEAK1Q9H792 1746 aa21.24■□□□□ 0.99
CCDC107-204ENST00000378409 RRS1Q15050 365 aaKnown RBP21.24■□□□□ 0.99
CCDC107-204ENST00000378409 SMG6Q86US8 1419 aaKnown RBP21.23■□□□□ 0.99
CCDC107-204ENST00000378409 HSPA1LP34931 641 aa21.23■□□□□ 0.99
CCDC107-204ENST00000378409 KCNH5Q8NCM2 988 aa21.23■□□□□ 0.99
CCDC107-204ENST00000378409 LRRC59Q96AG4 307 aaKnown RBP21.23■□□□□ 0.99
CCDC107-204ENST00000378409 POLKQ9UBT6 870 aa21.23■□□□□ 0.99
CCDC107-204ENST00000378409 PPM1GO15355 546 aaPredicted RBP21.22■□□□□ 0.99
CCDC107-204ENST00000378409 EMILIN1Q9Y6C2 1016 aa21.22■□□□□ 0.99
CCDC107-204ENST00000378409 COL22A1Q8NFW1 1626 aaPredicted RBP21.22■□□□□ 0.99
CCDC107-204ENST00000378409 CDK12Q9NYV4 1490 aaPredicted RBP21.21■□□□□ 0.99
CCDC107-204ENST00000378409 CFAP53Q96M91 514 aa21.21■□□□□ 0.99
CCDC107-204ENST00000378409 SHPRHQ149N8 1683 aa21.21■□□□□ 0.99
CCDC107-204ENST00000378409 GCP02774 474 aa21.2■□□□□ 0.98
CCDC107-204ENST00000378409 CABLES1Q8TDN4 633 aa21.2■□□□□ 0.98
CCDC107-204ENST00000378409 MAP3K19Q56UN5 1328 aa21.19■□□□□ 0.98
CCDC107-204ENST00000378409 PNPLA6Q8IY17 1366 aa21.18■□□□□ 0.98
CCDC107-204ENST00000378409 COL3A1P02461 1466 aaPredicted RBP21.18■□□□□ 0.98
CCDC107-204ENST00000378409 RGPD5Q99666 1765 aa21.18■□□□□ 0.98
CCDC107-204ENST00000378409 ZBTB7CA1YPR0 619 aa21.17■□□□□ 0.98
CCDC107-204ENST00000378409 AMPHP49418 695 aa21.16■□□□□ 0.98
CCDC107-204ENST00000378409 HAP1P54257 671 aaPredicted RBP21.16■□□□□ 0.98
CCDC107-204ENST00000378409 FLT4P35916 1363 aa21.15■□□□□ 0.98
CCDC107-204ENST00000378409 FAM9BQ8IZU0 186 aa21.15■□□□□ 0.98
CCDC107-204ENST00000378409 ZC3H6P61129 1189 aaKnown RBP21.14■□□□□ 0.97
CCDC107-204ENST00000378409 PNISRQ8TF01 805 aaKnown RBP21.14■□□□□ 0.97
CCDC107-204ENST00000378409 RTL1A6NKG5 1358 aa21.13■□□□□ 0.97
CCDC107-204ENST00000378409 INSRP06213 1382 aa21.13■□□□□ 0.97
CCDC107-204ENST00000378409 KIF24Q5T7B8 1368 aa21.13■□□□□ 0.97
CCDC107-204ENST00000378409 ARHGEF25Q86VW2 580 aa21.13■□□□□ 0.97
CCDC107-204ENST00000378409 COL18A1P39060 1754 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms