RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 ERC2O15083 957 aa14.4□□□□□ -0.1
PCDHA9-201ENST00000378122 KIF6Q6ZMV9 814 aa14.4□□□□□ -0.1
PCDHA9-201ENST00000378122 PDILTQ8N807 584 aa14.4□□□□□ -0.1
PCDHA9-201ENST00000378122 IPO7O95373 1038 aaKnown RBP14.4□□□□□ -0.1
PCDHA9-201ENST00000378122 RIC3Q7Z5B4 369 aa14.4□□□□□ -0.1
PCDHA9-201ENST00000378122 TRDNQ13061 729 aa14.4□□□□□ -0.1
PCDHA9-201ENST00000378122 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.39□□□□□ -0.11
PCDHA9-201ENST00000378122 NCOA2Q15596 1464 aa14.39□□□□□ -0.11
PCDHA9-201ENST00000378122 FGD5Q6ZNL6 1462 aa14.39□□□□□ -0.11
PCDHA9-201ENST00000378122 AK7Q96M32 723 aa14.39□□□□□ -0.11
PCDHA9-201ENST00000378122 CCDC47Q96A33 483 aaKnown RBP14.39□□□□□ -0.11
PCDHA9-201ENST00000378122 DDX58O95786 925 aaKnown RBP14.39□□□□□ -0.11
PCDHA9-201ENST00000378122 PPP2R1AP30153 589 aa14.39□□□□□ -0.11
PCDHA9-201ENST00000378122 AAMPQ13685 434 aa14.39□□□□□ -0.11
PCDHA9-201ENST00000378122 SLC26A8Q96RN1 970 aa14.39□□□□□ -0.11
PCDHA9-201ENST00000378122 BCAR3O75815 825 aa14.38□□□□□ -0.11
PCDHA9-201ENST00000378122 PRDM11Q9NQV5 511 aa14.38□□□□□ -0.11
PCDHA9-201ENST00000378122 RUFY1Q96T51 708 aa14.38□□□□□ -0.11
PCDHA9-201ENST00000378122 LETM1O95202 739 aaPredicted RBP14.38□□□□□ -0.11
PCDHA9-201ENST00000378122 NAP1L1P55209 391 aaKnown RBP14.38□□□□□ -0.11
PCDHA9-201ENST00000378122 WWC2Q6AWC2 1192 aa14.38□□□□□ -0.11
PCDHA9-201ENST00000378122 NOB1Q9ULX3 412 aaKnown RBP14.38□□□□□ -0.11
PCDHA9-201ENST00000378122 ERICH2A1L162 156 aa14.37□□□□□ -0.11
PCDHA9-201ENST00000378122 CNTROBQ8N137 903 aa14.37□□□□□ -0.11
PCDHA9-201ENST00000378122 ZSCAN29Q8IWY8 852 aaPredicted RBP14.37□□□□□ -0.11
PCDHA9-201ENST00000378122 OLFM4Q6UX06 510 aa14.37□□□□□ -0.11
PCDHA9-201ENST00000378122 NEUROD6Q96NK8 337 aa14.37□□□□□ -0.11
PCDHA9-201ENST00000378122 THEMISQ8N1K5 641 aaPredicted RBP14.37□□□□□ -0.11
PCDHA9-201ENST00000378122 FYCO1Q9BQS8 1478 aa14.37□□□□□ -0.11
PCDHA9-201ENST00000378122 RAD54L2Q9Y4B4 1467 aa14.36□□□□□ -0.11
PCDHA9-201ENST00000378122 ACBD3Q9H3P7 528 aa14.36□□□□□ -0.11
PCDHA9-201ENST00000378122 SPC24Q8NBT2 197 aa14.36□□□□□ -0.11
PCDHA9-201ENST00000378122 NAT10Q9H0A0 1025 aaKnown RBP14.36□□□□□ -0.11
PCDHA9-201ENST00000378122 UBTFL1P0CB47 393 aaPredicted RBP14.36□□□□□ -0.11
PCDHA9-201ENST00000378122 SKIDA1Q1XH10 827 aa14.36□□□□□ -0.11
PCDHA9-201ENST00000378122 HSP90AB4PQ58FF6 505 aa14.36□□□□□ -0.11
PCDHA9-201ENST00000378122 BACH2Q9BYV9 841 aa14.36□□□□□ -0.11
PCDHA9-201ENST00000378122 WDR78Q5VTH9 848 aa14.36□□□□□ -0.11
PCDHA9-201ENST00000378122 TTLL5Q6EMB2 1281 aa14.36□□□□□ -0.11
PCDHA9-201ENST00000378122 EXOSC9Q06265 439 aaKnown RBP14.35□□□□□ -0.11
PCDHA9-201ENST00000378122 TMEM87AQ8NBN3 555 aa14.35□□□□□ -0.11
PCDHA9-201ENST00000378122 TRIM5Q9C035 493 aa14.35□□□□□ -0.11
PCDHA9-201ENST00000378122 MTHFSP49914 203 aa14.35□□□□□ -0.11
PCDHA9-201ENST00000378122 GRPEL1Q9HAV7 217 aa14.35□□□□□ -0.11
PCDHA9-201ENST00000378122 TCP11L2Q8N4U5 519 aa14.35□□□□□ -0.11
PCDHA9-201ENST00000378122 SMC2O95347 1197 aa14.35□□□□□ -0.11
PCDHA9-201ENST00000378122 WDHD1O75717 1129 aaPredicted RBP14.34□□□□□ -0.11
PCDHA9-201ENST00000378122 NEK4P51957 841 aa14.34□□□□□ -0.11
PCDHA9-201ENST00000378122 WASHC4Q2M389 1173 aa14.34□□□□□ -0.11
PCDHA9-201ENST00000378122 SMG6Q86US8 1419 aaKnown RBP14.34□□□□□ -0.11
PCDHA9-201ENST00000378122 WDR97A6NE52 1622 aa14.34□□□□□ -0.11
PCDHA9-201ENST00000378122 PSMA5P28066 241 aa14.34□□□□□ -0.11
PCDHA9-201ENST00000378122 IGF1RP08069 1367 aa14.34□□□□□ -0.11
PCDHA9-201ENST00000378122 UQCRHLA0A096LP55 91 aa14.34□□□□□ -0.11
PCDHA9-201ENST00000378122 UQCRHP07919 91 aa14.34□□□□□ -0.11
PCDHA9-201ENST00000378122 TMEM132EQ6IEE7 984 aa14.34□□□□□ -0.11
PCDHA9-201ENST00000378122 ZC3H6P61129 1189 aaKnown RBP14.34□□□□□ -0.11
PCDHA9-201ENST00000378122 HSP90B2PQ58FF3 399 aa14.34□□□□□ -0.11
PCDHA9-201ENST00000378122 SPINK5Q9NQ38 1064 aaPredicted RBP14.34□□□□□ -0.11
PCDHA9-201ENST00000378122 CWC15Q9P013 229 aaKnown RBP14.34□□□□□ -0.11
PCDHA9-201ENST00000378122 GAPVD1Q14C86 1478 aa14.33□□□□□ -0.11
PCDHA9-201ENST00000378122 ANKRD50Q9ULJ7 1429 aa14.33□□□□□ -0.12
PCDHA9-201ENST00000378122 TSR2Q969E8 191 aaKnown RBP14.33□□□□□ -0.12
PCDHA9-201ENST00000378122 SAFBQ15424 915 aaKnown RBP eCLIP14.33□□□□□ -0.12
PCDHA9-201ENST00000378122 FSD1Q9BTV5 496 aa14.33□□□□□ -0.12
PCDHA9-201ENST00000378122 CCDC66A2RUB6 948 aa14.33□□□□□ -0.12
PCDHA9-201ENST00000378122 RRBP1Q9P2E9 1410 aaKnown RBP14.33□□□□□ -0.12
PCDHA9-201ENST00000378122 CA8P35219 290 aa14.32□□□□□ -0.12
PCDHA9-201ENST00000378122 CABP4P57796 275 aa14.32□□□□□ -0.12
PCDHA9-201ENST00000378122 CAGE1Q8TC20 777 aa14.32□□□□□ -0.12
PCDHA9-201ENST00000378122 CASKIN1Q8WXD9 1431 aa14.32□□□□□ -0.12
PCDHA9-201ENST00000378122 RAPGEF3O95398 923 aa14.32□□□□□ -0.12
PCDHA9-201ENST00000378122 CEBPZQ03701 1054 aaKnown RBP14.32□□□□□ -0.12
PCDHA9-201ENST00000378122 RABEP1Q15276 862 aa14.32□□□□□ -0.12
PCDHA9-201ENST00000378122 MPNDQ8N594 471 aa14.32□□□□□ -0.12
PCDHA9-201ENST00000378122 MAP4K4O95819 1239 aaPredicted RBP14.31□□□□□ -0.12
PCDHA9-201ENST00000378122 RALYLQ86SE5 291 aaKnown RBP14.31□□□□□ -0.12
PCDHA9-201ENST00000378122 MBD3O95983 291 aa14.31□□□□□ -0.12
PCDHA9-201ENST00000378122 CCDC184Q52MB2 194 aa14.31□□□□□ -0.12
PCDHA9-201ENST00000378122 DNAJC2Q99543 621 aaKnown RBP14.31□□□□□ -0.12
PCDHA9-201ENST00000378122 SDF4Q9BRK5 362 aa14.31□□□□□ -0.12
PCDHA9-201ENST00000378122 FIBPO43427 364 aa14.31□□□□□ -0.12
PCDHA9-201ENST00000378122 C8orf37Q96NL8 207 aa14.31□□□□□ -0.12
PCDHA9-201ENST00000378122 ARHGAP5Q13017 1502 aa14.3□□□□□ -0.12
PCDHA9-201ENST00000378122 TTC16Q8NEE8 873 aa14.3□□□□□ -0.12
PCDHA9-201ENST00000378122 TATP17735 454 aaPredicted RBP14.3□□□□□ -0.12
PCDHA9-201ENST00000378122 ARAP1Q96P48 1450 aa14.3□□□□□ -0.12
PCDHA9-201ENST00000378122 K7ELQ4 463 aaPredicted RBP14.29□□□□□ -0.12
PCDHA9-201ENST00000378122 MPHOSPH10O00566 681 aaKnown RBP14.29□□□□□ -0.12
PCDHA9-201ENST00000378122 GCC1Q96CN9 775 aa14.29□□□□□ -0.12
PCDHA9-201ENST00000378122 KAT6BQ8WYB5 2073 aa14.29□□□□□ -0.12
PCDHA9-201ENST00000378122 SURF6O75683 361 aaKnown RBP14.29□□□□□ -0.12
PCDHA9-201ENST00000378122 DHX37Q8IY37 1157 aaKnown RBP14.29□□□□□ -0.12
PCDHA9-201ENST00000378122 CFTRP13569 1480 aa14.28□□□□□ -0.12
PCDHA9-201ENST00000378122 CALRP27797 417 aaKnown RBP14.28□□□□□ -0.12
PCDHA9-201ENST00000378122 ODF2Q5BJF6 829 aa14.28□□□□□ -0.12
PCDHA9-201ENST00000378122 PDE3AQ14432 1141 aa14.28□□□□□ -0.12
PCDHA9-201ENST00000378122 CT47A1Q5JQC4 288 aaPredicted RBP14.28□□□□□ -0.12
PCDHA9-201ENST00000378122 PRKAR2BP31323 418 aa14.28□□□□□ -0.12
PCDHA9-201ENST00000378122 TWISTNBQ3B726 338 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms