RNA–Protein interactions for RNA: ENST00000378045.4

FUNDC1-201, Transcript of FUN14 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FUNDC1, Length 1,196 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FUNDC1-201ENST00000378045 BRWD3Q6RI45 1802 aa18.4■□□□□ 0.54
FUNDC1-201ENST00000378045 NRAPQ86VF7 1730 aa18.4■□□□□ 0.54
FUNDC1-201ENST00000378045 NWD2Q9ULI1 1742 aa18.4■□□□□ 0.54
FUNDC1-201ENST00000378045 PHRF1Q9P1Y6 1649 aaKnown RBP18.39■□□□□ 0.53
FUNDC1-201ENST00000378045 NUTM2GQ5VZR2 741 aa18.39■□□□□ 0.53
FUNDC1-201ENST00000378045 UNC5CLQ8IV45 518 aa18.39■□□□□ 0.53
FUNDC1-201ENST00000378045 CCDC9Q9Y3X0 531 aaKnown RBP18.39■□□□□ 0.53
FUNDC1-201ENST00000378045 GJD4Q96KN9 370 aaPredicted RBP18.38■□□□□ 0.53
FUNDC1-201ENST00000378045 CENPJQ9HC77 1338 aaPredicted RBP18.38■□□□□ 0.53
FUNDC1-201ENST00000378045 SRPK2P78362 688 aaKnown RBP18.36■□□□□ 0.53
FUNDC1-201ENST00000378045 COL14A1Q05707 1796 aaKnown RBP18.36■□□□□ 0.53
FUNDC1-201ENST00000378045 ATAD2Q6PL18 1390 aa18.36■□□□□ 0.53
FUNDC1-201ENST00000378045 CABP2Q9NPB3 220 aa18.36■□□□□ 0.53
FUNDC1-201ENST00000378045 ACEP12821 1306 aa18.35■□□□□ 0.53
FUNDC1-201ENST00000378045 FAM83GA6ND36 823 aa18.35■□□□□ 0.53
FUNDC1-201ENST00000378045 PPP4R3CPQ6ZMV5 832 aa18.35■□□□□ 0.53
FUNDC1-201ENST00000378045 PPIP5K1Q6PFW1 1433 aa18.34■□□□□ 0.53
FUNDC1-201ENST00000378045 ROCK2O75116 1388 aaKnown RBP18.34■□□□□ 0.53
FUNDC1-201ENST00000378045 MAPK8IP2Q13387 824 aaPredicted RBP18.34■□□□□ 0.53
FUNDC1-201ENST00000378045 EP400Q96L91 3159 aa18.32■□□□□ 0.52
FUNDC1-201ENST00000378045 A0A0G2JS52 829 aa18.32■□□□□ 0.52
FUNDC1-201ENST00000378045 MYT1Q01538 1121 aa18.32■□□□□ 0.52
FUNDC1-201ENST00000378045 BTG4Q9NY30 223 aa18.32■□□□□ 0.52
FUNDC1-201ENST00000378045 NRKQ7Z2Y5 1582 aa18.31■□□□□ 0.52
FUNDC1-201ENST00000378045 CHRNA2Q15822 529 aa18.31■□□□□ 0.52
FUNDC1-201ENST00000378045 NBPF8Q3BBV2 869 aa18.31■□□□□ 0.52
FUNDC1-201ENST00000378045 POLR3AO14802 1390 aaPredicted RBP18.3■□□□□ 0.52
FUNDC1-201ENST00000378045 VPS72Q15906 364 aa18.3■□□□□ 0.52
FUNDC1-201ENST00000378045 CCDC61Q9Y6R9 512 aa18.3■□□□□ 0.52
FUNDC1-201ENST00000378045 SEPT12Q8IYM1 358 aa18.29■□□□□ 0.52
FUNDC1-201ENST00000378045 PRDM11Q9NQV5 511 aa18.29■□□□□ 0.52
FUNDC1-201ENST00000378045 KIAA0232Q92628 1395 aa18.29■□□□□ 0.52
FUNDC1-201ENST00000378045 ZC3H6P61129 1189 aaKnown RBP18.28■□□□□ 0.52
FUNDC1-201ENST00000378045 FAM98CQ17RN3 349 aaKnown RBP18.27■□□□□ 0.52
FUNDC1-201ENST00000378045 PLEKHG3A1L390 1219 aa18.26■□□□□ 0.51
FUNDC1-201ENST00000378045 ZBTB7CA1YPR0 619 aa18.25■□□□□ 0.51
FUNDC1-201ENST00000378045 ABTB2Q8N961 1025 aa18.25■□□□□ 0.51
FUNDC1-201ENST00000378045 STRN4Q9NRL3 753 aa18.25■□□□□ 0.51
FUNDC1-201ENST00000378045 CABP1Q9NZU7 370 aa18.25■□□□□ 0.51
FUNDC1-201ENST00000378045 TONSLQ96HA7 1378 aa18.25■□□□□ 0.51
FUNDC1-201ENST00000378045 PIK3C2AO00443 1686 aa18.23■□□□□ 0.51
FUNDC1-201ENST00000378045 TRIM26Q12899 539 aaPredicted RBP18.23■□□□□ 0.51
FUNDC1-201ENST00000378045 EVC2Q86UK5 1308 aa18.23■□□□□ 0.51
FUNDC1-201ENST00000378045 AKAP12Q02952 1782 aa18.22■□□□□ 0.51
FUNDC1-201ENST00000378045 FAM182BQ5T319 152 aa18.22■□□□□ 0.51
FUNDC1-201ENST00000378045 USP6P35125 1406 aa18.22■□□□□ 0.51
FUNDC1-201ENST00000378045 THSD7AQ9UPZ6 1657 aa18.21■□□□□ 0.51
FUNDC1-201ENST00000378045 LMO7Q8WWI1 1683 aa18.2■□□□□ 0.5
FUNDC1-201ENST00000378045 KRT27Q7Z3Y8 459 aa18.2■□□□□ 0.5
FUNDC1-201ENST00000378045 CARD11Q9BXL7 1154 aa18.2■□□□□ 0.5
FUNDC1-201ENST00000378045 USP35Q9P2H5 1018 aa18.2■□□□□ 0.5
FUNDC1-201ENST00000378045 SPATA31A5Q5VU36 1347 aa18.2■□□□□ 0.5
FUNDC1-201ENST00000378045 SPATA31A7Q8IWB4 1347 aa18.2■□□□□ 0.5
FUNDC1-201ENST00000378045 CAMTA1Q9Y6Y1 1673 aa18.19■□□□□ 0.5
FUNDC1-201ENST00000378045 USP19O94966 1318 aa18.19■□□□□ 0.5
FUNDC1-201ENST00000378045 DEFB132Q7Z7B7 95 aa18.18■□□□□ 0.5
FUNDC1-201ENST00000378045 BLMP54132 1417 aaPredicted RBP18.17■□□□□ 0.5
FUNDC1-201ENST00000378045 SOX12O15370 315 aa18.17■□□□□ 0.5
FUNDC1-201ENST00000378045 SSH2Q76I76 1423 aa18.16■□□□□ 0.5
FUNDC1-201ENST00000378045 MON2Q7Z3U7 1717 aa18.15■□□□□ 0.5
FUNDC1-201ENST00000378045 SLIT3O75094 1523 aa18.15■□□□□ 0.5
FUNDC1-201ENST00000378045 NLRP6P59044 892 aa18.15■□□□□ 0.5
FUNDC1-201ENST00000378045 NLRP13Q86W25 1043 aa18.15■□□□□ 0.5
FUNDC1-201ENST00000378045 SPATA31A1Q5TZJ5 1347 aa18.15■□□□□ 0.5
FUNDC1-201ENST00000378045 ONECUT3O60422 494 aaPredicted RBP18.14■□□□□ 0.49
FUNDC1-201ENST00000378045 GCP02774 474 aa18.14■□□□□ 0.49
FUNDC1-201ENST00000378045 EVA1CP58658 441 aa18.14■□□□□ 0.49
FUNDC1-201ENST00000378045 LARP1Q6PKG0 1096 aaKnown RBP18.14■□□□□ 0.49
FUNDC1-201ENST00000378045 RGPD5Q99666 1765 aa18.13■□□□□ 0.49
FUNDC1-201ENST00000378045 CPDO75976 1380 aa18.12■□□□□ 0.49
FUNDC1-201ENST00000378045 COL5A2P05997 1499 aaPredicted RBP18.12■□□□□ 0.49
FUNDC1-201ENST00000378045 RGPD1P0DJD0 1748 aa18.12■□□□□ 0.49
FUNDC1-201ENST00000378045 TNS1Q9HBL0 1735 aaKnown RBP18.12■□□□□ 0.49
FUNDC1-201ENST00000378045 SF3B2Q13435 895 aaKnown RBP18.11■□□□□ 0.49
FUNDC1-201ENST00000378045 ZRANB1Q9UGI0 708 aa18.11■□□□□ 0.49
FUNDC1-201ENST00000378045 TTC21BQ7Z4L5 1316 aa18.11■□□□□ 0.49
FUNDC1-201ENST00000378045 KTN1Q86UP2 1357 aaKnown RBP18.11■□□□□ 0.49
FUNDC1-201ENST00000378045 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.1■□□□□ 0.49
FUNDC1-201ENST00000378045 TMC1Q8TDI8 760 aa18.1■□□□□ 0.49
FUNDC1-201ENST00000378045 COL18A1P39060 1754 aa18.09■□□□□ 0.49
FUNDC1-201ENST00000378045 BRD4O60885 1362 aaPredicted RBP18.09■□□□□ 0.49
FUNDC1-201ENST00000378045 CCDC125Q86Z20 511 aa18.09■□□□□ 0.49
FUNDC1-201ENST00000378045 CD163L1Q9NR16 1453 aa18.08■□□□□ 0.49
FUNDC1-201ENST00000378045 CPSF1Q10570 1443 aaKnown RBP18.08■□□□□ 0.49
FUNDC1-201ENST00000378045 SBNO2Q9Y2G9 1366 aa18.08■□□□□ 0.49
FUNDC1-201ENST00000378045 WNK3Q9BYP7 1800 aa18.07■□□□□ 0.48
FUNDC1-201ENST00000378045 PCGF6Q9BYE7 350 aa18.06■□□□□ 0.48
FUNDC1-201ENST00000378045 NFAT5O94916 1531 aa18.06■□□□□ 0.48
FUNDC1-201ENST00000378045 NME9Q86XW9 330 aa18.05■□□□□ 0.48
FUNDC1-201ENST00000378045 SLC12A5Q9H2X9 1139 aa18.05■□□□□ 0.48
FUNDC1-201ENST00000378045 LRRC37A3O60309 1634 aa18.05■□□□□ 0.48
FUNDC1-201ENST00000378045 LTN1O94822 1766 aa18.04■□□□□ 0.48
FUNDC1-201ENST00000378045 PARP4Q9UKK3 1724 aaKnown RBP18.04■□□□□ 0.48
FUNDC1-201ENST00000378045 ST20-MTHFSA0A0A6YYL1 179 aa18.04■□□□□ 0.48
FUNDC1-201ENST00000378045 EN1Q05925 392 aaPredicted RBP18.04■□□□□ 0.48
FUNDC1-201ENST00000378045 TCP11L2Q8N4U5 519 aa18.04■□□□□ 0.48
FUNDC1-201ENST00000378045 AXIN2Q9Y2T1 843 aa18.04■□□□□ 0.48
FUNDC1-201ENST00000378045 CRB1P82279 1406 aa18.04■□□□□ 0.48
FUNDC1-201ENST00000378045 TTC21AQ8NDW8 1320 aa18.03■□□□□ 0.48
FUNDC1-201ENST00000378045 TRIM37O94972 964 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms