RNA–Protein interactions for RNA: ENST00000377067.8

GPC5-201, Transcript of glypican 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC5, Length 2,957 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC5-201ENST00000377067 ZBTB40Q9NUA8 1239 aa23.67■■□□□ 1.38
GPC5-201ENST00000377067 CEP152O94986 1710 aa23.67■■□□□ 1.38
GPC5-201ENST00000377067 SHPRHQ149N8 1683 aa23.67■■□□□ 1.38
GPC5-201ENST00000377067 PKP1Q13835 747 aa23.67■■□□□ 1.38
GPC5-201ENST00000377067 CLEC17AQ6ZS10 378 aa23.67■■□□□ 1.38
GPC5-201ENST00000377067 CARMIL2Q6F5E8 1435 aa23.66■■□□□ 1.38
GPC5-201ENST00000377067 CCDC27Q2M243 656 aa23.66■■□□□ 1.38
GPC5-201ENST00000377067 LMBRD1Q9NUN5 540 aa23.66■■□□□ 1.38
GPC5-201ENST00000377067 U2AF1L5P0DN76 240 aaPredicted RBP23.66■■□□□ 1.38
GPC5-201ENST00000377067 U2AF1Q01081 240 aaKnown RBP eCLIP23.66■■□□□ 1.38
GPC5-201ENST00000377067 BMP2KLQ5H9B9 411 aa23.65■■□□□ 1.38
GPC5-201ENST00000377067 CHMP7Q8WUX9 453 aaPredicted RBP23.65■■□□□ 1.38
GPC5-201ENST00000377067 JARID2Q92833 1246 aaPredicted RBP23.65■■□□□ 1.38
GPC5-201ENST00000377067 ANKRD45Q5TZF3 282 aa23.65■■□□□ 1.38
GPC5-201ENST00000377067 NSD3Q9BZ95 1437 aa23.65■■□□□ 1.38
GPC5-201ENST00000377067 KANK1Q14678 1352 aa23.65■■□□□ 1.38
GPC5-201ENST00000377067 SASS6Q6UVJ0 657 aa23.63■■□□□ 1.37
GPC5-201ENST00000377067 CHAMP1Q96JM3 812 aa23.63■■□□□ 1.37
GPC5-201ENST00000377067 SHROOM2Q13796 1616 aa23.63■■□□□ 1.37
GPC5-201ENST00000377067 SLC24A1O60721 1099 aa23.63■■□□□ 1.37
GPC5-201ENST00000377067 PRPF40AO75400 957 aaKnown RBP23.62■■□□□ 1.37
GPC5-201ENST00000377067 CSPP1Q1MSJ5 1256 aa23.62■■□□□ 1.37
GPC5-201ENST00000377067 MTERF4Q7Z6M4 381 aaKnown RBP23.62■■□□□ 1.37
GPC5-201ENST00000377067 SLC12A5Q9H2X9 1139 aa23.61■■□□□ 1.37
GPC5-201ENST00000377067 TSC1Q92574 1164 aa23.61■■□□□ 1.37
GPC5-201ENST00000377067 RNF214Q8ND24 703 aa23.6■■□□□ 1.37
GPC5-201ENST00000377067 CDC42BPBQ9Y5S2 1711 aa23.6■■□□□ 1.37
GPC5-201ENST00000377067 KIF16BQ96L93 1317 aa23.6■■□□□ 1.37
GPC5-201ENST00000377067 GPT2Q8TD30 523 aa23.6■■□□□ 1.37
GPC5-201ENST00000377067 C1orf115Q9H7X2 142 aa23.6■■□□□ 1.37
GPC5-201ENST00000377067 TTC37Q6PGP7 1564 aa23.59■■□□□ 1.37
GPC5-201ENST00000377067 CFAP53Q96M91 514 aa23.59■■□□□ 1.37
GPC5-201ENST00000377067 MAST1Q9Y2H9 1570 aa23.58■■□□□ 1.37
GPC5-201ENST00000377067 SYCE3A1L190 88 aa23.58■■□□□ 1.37
GPC5-201ENST00000377067 CCDC94Q9BW85 323 aaPredicted RBP23.57■■□□□ 1.36
GPC5-201ENST00000377067 IFT140Q96RY7 1462 aa23.57■■□□□ 1.36
GPC5-201ENST00000377067 MPNDQ8N594 471 aa23.56■■□□□ 1.36
GPC5-201ENST00000377067 CCDC39Q9UFE4 941 aa23.56■■□□□ 1.36
GPC5-201ENST00000377067 NUCB2P80303 420 aa23.56■■□□□ 1.36
GPC5-201ENST00000377067 TMEM63CQ9P1W3 806 aa23.56■■□□□ 1.36
GPC5-201ENST00000377067 NSFL1CQ9UNZ2 370 aaKnown RBP23.55■■□□□ 1.36
GPC5-201ENST00000377067 DUOX2Q9NRD8 1548 aa23.55■■□□□ 1.36
GPC5-201ENST00000377067 CT47B1P0C2W7 299 aaPredicted RBP23.55■■□□□ 1.36
GPC5-201ENST00000377067 DMTNQ08495 405 aa23.55■■□□□ 1.36
GPC5-201ENST00000377067 FOXD4L5Q5VV16 416 aaPredicted RBP23.55■■□□□ 1.36
GPC5-201ENST00000377067 FOXD4L4Q8WXT5 416 aaPredicted RBP23.55■■□□□ 1.36
GPC5-201ENST00000377067 CYP2E1P05181 493 aaPredicted RBP23.54■■□□□ 1.36
GPC5-201ENST00000377067 ARHGAP5Q13017 1502 aa23.54■■□□□ 1.36
GPC5-201ENST00000377067 PTMAP06454 111 aaKnown RBP23.54■■□□□ 1.36
GPC5-201ENST00000377067 ZSCAN20P17040 1043 aaPredicted RBP23.54■■□□□ 1.36
GPC5-201ENST00000377067 MCM5P33992 734 aa23.54■■□□□ 1.36
GPC5-201ENST00000377067 DNTTIP2Q5QJE6 756 aaKnown RBP23.54■■□□□ 1.36
GPC5-201ENST00000377067 ZGPATQ8N5A5 531 aaKnown RBP23.54■■□□□ 1.36
GPC5-201ENST00000377067 ZNF518AQ6AHZ1 1483 aa23.54■■□□□ 1.36
GPC5-201ENST00000377067 SPHKAPQ2M3C7 1700 aa23.53■■□□□ 1.36
GPC5-201ENST00000377067 PREX2Q70Z35 1606 aa23.53■■□□□ 1.36
GPC5-201ENST00000377067 LRSAM1Q6UWE0 723 aa23.52■■□□□ 1.36
GPC5-201ENST00000377067 ADGRF5Q8IZF2 1346 aa23.52■■□□□ 1.36
GPC5-201ENST00000377067 ARHGAP31Q2M1Z3 1444 aa23.52■■□□□ 1.36
GPC5-201ENST00000377067 U2SURPO15042 1029 aaKnown RBP23.52■■□□□ 1.36
GPC5-201ENST00000377067 CFAP74Q9C0B2 1584 aa23.51■■□□□ 1.35
GPC5-201ENST00000377067 CBX1P83916 185 aa23.51■■□□□ 1.35
GPC5-201ENST00000377067 FAM177BA6PVY3 158 aa23.51■■□□□ 1.35
GPC5-201ENST00000377067 CDC45O75419 566 aa23.5■■□□□ 1.35
GPC5-201ENST00000377067 TRIM35Q9UPQ4 493 aa23.5■■□□□ 1.35
GPC5-201ENST00000377067 PTPRTO14522 1441 aa23.49■■□□□ 1.35
GPC5-201ENST00000377067 IPO8O15397 1037 aaKnown RBP23.49■■□□□ 1.35
GPC5-201ENST00000377067 RABEP1Q15276 862 aa23.49■■□□□ 1.35
GPC5-201ENST00000377067 NOS1P29475 1434 aa23.49■■□□□ 1.35
GPC5-201ENST00000377067 PPIP5K1Q6PFW1 1433 aa23.49■■□□□ 1.35
GPC5-201ENST00000377067 TMPOP42166 694 aaKnown RBP23.49■■□□□ 1.35
GPC5-201ENST00000377067 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.49■■□□□ 1.35
GPC5-201ENST00000377067 ZDHHC9Q9Y397 364 aa23.49■■□□□ 1.35
GPC5-201ENST00000377067 UTP14CQ5TAP6 766 aaKnown RBP23.48■■□□□ 1.35
GPC5-201ENST00000377067 KIAA2012Q0VF49 1180 aa23.48■■□□□ 1.35
GPC5-201ENST00000377067 ZNF710Q8N1W2 664 aa23.48■■□□□ 1.35
GPC5-201ENST00000377067 MYRIPQ8NFW9 859 aa23.47■■□□□ 1.35
GPC5-201ENST00000377067 STAC3Q96MF2 364 aa23.47■■□□□ 1.35
GPC5-201ENST00000377067 CD109Q6YHK3 1445 aa23.47■■□□□ 1.35
GPC5-201ENST00000377067 GSPT1P15170 499 aaKnown RBP23.46■■□□□ 1.35
GPC5-201ENST00000377067 FGD1P98174 961 aa23.46■■□□□ 1.35
GPC5-201ENST00000377067 ZNF830Q96NB3 372 aaPredicted RBP23.46■■□□□ 1.35
GPC5-201ENST00000377067 TRAK1Q9UPV9 953 aa23.46■■□□□ 1.35
GPC5-201ENST00000377067 CLTCL1P53675 1640 aa23.46■■□□□ 1.35
GPC5-201ENST00000377067 GCC1Q96CN9 775 aa23.46■■□□□ 1.35
GPC5-201ENST00000377067 SIRT2Q8IXJ6 389 aa23.43■■□□□ 1.34
GPC5-201ENST00000377067 C17orf53Q8N3J3 647 aaPredicted RBP23.43■■□□□ 1.34
GPC5-201ENST00000377067 TRPM2O94759 1503 aa23.43■■□□□ 1.34
GPC5-201ENST00000377067 ABCC11Q96J66 1382 aa23.43■■□□□ 1.34
GPC5-201ENST00000377067 ZBTB7BO15156 539 aaPredicted RBP23.43■■□□□ 1.34
GPC5-201ENST00000377067 ATP2B3Q16720 1220 aa23.42■■□□□ 1.34
GPC5-201ENST00000377067 PLEKHF1Q96S99 279 aa23.41■■□□□ 1.34
GPC5-201ENST00000377067 PPP4R3BQ5MIZ7 849 aa23.4■■□□□ 1.34
GPC5-201ENST00000377067 USP26Q9BXU7 913 aa23.4■■□□□ 1.34
GPC5-201ENST00000377067 CWC22Q9HCG8 908 aaKnown RBP23.4■■□□□ 1.34
GPC5-201ENST00000377067 NCBP3Q53F19 620 aaKnown RBP23.39■■□□□ 1.34
GPC5-201ENST00000377067 ADGRB2O60241 1585 aa23.39■■□□□ 1.34
GPC5-201ENST00000377067 TSPY26PQ9H489 355 aa23.38■■□□□ 1.33
GPC5-201ENST00000377067 ABCA6Q8N139 1617 aa23.37■■□□□ 1.33
GPC5-201ENST00000377067 SPDYE4A6NLX3 237 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms