RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 A0A0G2JS52 829 aa17.8■□□□□ 0.44
LSM2-208ENST00000375661 MYT1Q01538 1121 aa17.8■□□□□ 0.44
LSM2-208ENST00000375661 FAM98CQ17RN3 349 aaKnown RBP17.8■□□□□ 0.44
LSM2-208ENST00000375661 STAC3Q96MF2 364 aa17.8■□□□□ 0.44
LSM2-208ENST00000375661 TNS1Q9HBL0 1735 aaKnown RBP17.79■□□□□ 0.44
LSM2-208ENST00000375661 SPATA31A5Q5VU36 1347 aa17.78■□□□□ 0.44
LSM2-208ENST00000375661 SPATA31A7Q8IWB4 1347 aa17.78■□□□□ 0.44
LSM2-208ENST00000375661 DISP2A7MBM2 1401 aa17.78■□□□□ 0.44
LSM2-208ENST00000375661 PRR36Q9H6K5 1346 aa17.77■□□□□ 0.44
LSM2-208ENST00000375661 WASLO00401 505 aaPredicted RBP17.77■□□□□ 0.44
LSM2-208ENST00000375661 PCGF6Q9BYE7 350 aa17.77■□□□□ 0.44
LSM2-208ENST00000375661 TRAK1Q9UPV9 953 aa17.77■□□□□ 0.44
LSM2-208ENST00000375661 ARHGEF28Q8N1W1 1705 aaKnown RBP17.77■□□□□ 0.44
LSM2-208ENST00000375661 MINK1Q8N4C8 1332 aaPredicted RBP17.76■□□□□ 0.43
LSM2-208ENST00000375661 HIRIP3Q9BW71 556 aaPredicted RBP17.76■□□□□ 0.43
LSM2-208ENST00000375661 PHRF1Q9P1Y6 1649 aaKnown RBP17.76■□□□□ 0.43
LSM2-208ENST00000375661 NGDNQ8NEJ9 315 aaKnown RBP17.75■□□□□ 0.43
LSM2-208ENST00000375661 ATP7BP35670 1465 aa17.74■□□□□ 0.43
LSM2-208ENST00000375661 PSDA5PKW4 1024 aaPredicted RBP17.73■□□□□ 0.43
LSM2-208ENST00000375661 PRDM11Q9NQV5 511 aa17.73■□□□□ 0.43
LSM2-208ENST00000375661 TOPAZ1Q8N9V7 1692 aa17.71■□□□□ 0.43
LSM2-208ENST00000375661 PAK3O75914 559 aaPredicted RBP17.71■□□□□ 0.43
LSM2-208ENST00000375661 EN1Q05925 392 aaPredicted RBP17.71■□□□□ 0.43
LSM2-208ENST00000375661 DCAF11Q8TEB1 546 aa17.71■□□□□ 0.43
LSM2-208ENST00000375661 SPATA31A1Q5TZJ5 1347 aa17.71■□□□□ 0.42
LSM2-208ENST00000375661 FAM196AQ6ZSG2 479 aa17.69■□□□□ 0.42
LSM2-208ENST00000375661 KDM2AQ9Y2K7 1162 aa17.69■□□□□ 0.42
LSM2-208ENST00000375661 PARD3Q8TEW0 1356 aa17.68■□□□□ 0.42
LSM2-208ENST00000375661 KIAA0232Q92628 1395 aa17.68■□□□□ 0.42
LSM2-208ENST00000375661 NUDT16Q96DE0 195 aaKnown RBP17.68■□□□□ 0.42
LSM2-208ENST00000375661 KIAA1210Q9ULL0 1709 aa17.68■□□□□ 0.42
LSM2-208ENST00000375661 FAM182BQ5T319 152 aa17.67■□□□□ 0.42
LSM2-208ENST00000375661 RREB1Q92766 1687 aa17.67■□□□□ 0.42
LSM2-208ENST00000375661 POLR3AO14802 1390 aaPredicted RBP17.66■□□□□ 0.42
LSM2-208ENST00000375661 R3HDM1Q15032 1099 aaKnown RBP17.65■□□□□ 0.42
LSM2-208ENST00000375661 BARGINQ6ZT62 677 aa17.65■□□□□ 0.42
LSM2-208ENST00000375661 NRKQ7Z2Y5 1582 aa17.65■□□□□ 0.42
LSM2-208ENST00000375661 EZH2Q15910 746 aaKnown RBP17.64■□□□□ 0.41
LSM2-208ENST00000375661 CAMKK2Q96RR4 588 aa17.64■□□□□ 0.41
LSM2-208ENST00000375661 LMO7Q8WWI1 1683 aa17.64■□□□□ 0.41
LSM2-208ENST00000375661 CHRNA2Q15822 529 aa17.63■□□□□ 0.41
LSM2-208ENST00000375661 CCDC61Q9Y6R9 512 aa17.63■□□□□ 0.41
LSM2-208ENST00000375661 NUP188Q5SRE5 1749 aa17.63■□□□□ 0.41
LSM2-208ENST00000375661 SSH2Q76I76 1423 aa17.63■□□□□ 0.41
LSM2-208ENST00000375661 PLEKHG3A1L390 1219 aa17.62■□□□□ 0.41
LSM2-208ENST00000375661 TRIM37O94972 964 aa17.62■□□□□ 0.41
LSM2-208ENST00000375661 CDK19Q9BWU1 502 aa17.62■□□□□ 0.41
LSM2-208ENST00000375661 STRN4Q9NRL3 753 aa17.62■□□□□ 0.41
LSM2-208ENST00000375661 CPDO75976 1380 aa17.62■□□□□ 0.41
LSM2-208ENST00000375661 PARP4Q9UKK3 1724 aaKnown RBP17.61■□□□□ 0.41
LSM2-208ENST00000375661 EVA1CP58658 441 aa17.61■□□□□ 0.41
LSM2-208ENST00000375661 ZC3H6P61129 1189 aaKnown RBP17.61■□□□□ 0.41
LSM2-208ENST00000375661 NBPF8Q3BBV2 869 aa17.61■□□□□ 0.41
LSM2-208ENST00000375661 ACEP12821 1306 aa17.61■□□□□ 0.41
LSM2-208ENST00000375661 CAMTA1Q9Y6Y1 1673 aa17.61■□□□□ 0.41
LSM2-208ENST00000375661 APBA3O96018 575 aa17.6■□□□□ 0.41
LSM2-208ENST00000375661 PDE3BQ13370 1112 aa17.6■□□□□ 0.41
LSM2-208ENST00000375661 THRAP3Q9Y2W1 955 aaKnown RBP17.6■□□□□ 0.41
LSM2-208ENST00000375661 C11orf95C9JLR9 678 aaPredicted RBP17.59■□□□□ 0.41
LSM2-208ENST00000375661 BRD4O60885 1362 aaPredicted RBP17.58■□□□□ 0.4
LSM2-208ENST00000375661 USP19O94966 1318 aa17.58■□□□□ 0.4
LSM2-208ENST00000375661 TCP11L2Q8N4U5 519 aa17.58■□□□□ 0.4
LSM2-208ENST00000375661 ABTB2Q8N961 1025 aa17.58■□□□□ 0.4
LSM2-208ENST00000375661 RGPD3A6NKT7 1758 aaPredicted RBP17.58■□□□□ 0.4
LSM2-208ENST00000375661 RGPD4Q7Z3J3 1758 aa17.58■□□□□ 0.4
LSM2-208ENST00000375661 NUTM2GQ5VZR2 741 aa17.57■□□□□ 0.4
LSM2-208ENST00000375661 USP35Q9P2H5 1018 aa17.57■□□□□ 0.4
LSM2-208ENST00000375661 NBPF14Q5TI25 921 aa17.56■□□□□ 0.4
LSM2-208ENST00000375661 NLRP13Q86W25 1043 aa17.56■□□□□ 0.4
LSM2-208ENST00000375661 LARP1Q6PKG0 1096 aaKnown RBP17.55■□□□□ 0.4
LSM2-208ENST00000375661 SBF2Q86WG5 1849 aa17.54■□□□□ 0.4
LSM2-208ENST00000375661 COL5A2P05997 1499 aaPredicted RBP17.54■□□□□ 0.4
LSM2-208ENST00000375661 PEAK1Q9H792 1746 aa17.53■□□□□ 0.4
LSM2-208ENST00000375661 PPIP5K1Q6PFW1 1433 aa17.53■□□□□ 0.4
LSM2-208ENST00000375661 WNK3Q9BYP7 1800 aa17.52■□□□□ 0.4
LSM2-208ENST00000375661 GCP02774 474 aa17.52■□□□□ 0.4
LSM2-208ENST00000375661 CRB1P82279 1406 aa17.52■□□□□ 0.4
LSM2-208ENST00000375661 QRICH2Q9H0J4 1663 aa17.52■□□□□ 0.39
LSM2-208ENST00000375661 OVOS2A0A0G2JMS6 1433 aa17.5■□□□□ 0.39
LSM2-208ENST00000375661 OVOS2A0A0J9YW53 1432 aa17.5■□□□□ 0.39
LSM2-208ENST00000375661 OVOS2Q6IE36 1432 aa17.5■□□□□ 0.39
LSM2-208ENST00000375661 SLIT3O75094 1523 aa17.5■□□□□ 0.39
LSM2-208ENST00000375661 LRRC37A3O60309 1634 aa17.5■□□□□ 0.39
LSM2-208ENST00000375661 SRPK2P78362 688 aaKnown RBP17.49■□□□□ 0.39
LSM2-208ENST00000375661 CENPJQ9HC77 1338 aaPredicted RBP17.48■□□□□ 0.39
LSM2-208ENST00000375661 COL18A1P39060 1754 aa17.48■□□□□ 0.39
LSM2-208ENST00000375661 AKAP12Q02952 1782 aa17.48■□□□□ 0.39
LSM2-208ENST00000375661 SPON1Q9HCB6 807 aa17.48■□□□□ 0.39
LSM2-208ENST00000375661 AATKQ6ZMQ8 1374 aa17.48■□□□□ 0.39
LSM2-208ENST00000375661 USP6P35125 1406 aa17.47■□□□□ 0.39
LSM2-208ENST00000375661 NINLQ9Y2I6 1382 aa17.46■□□□□ 0.39
LSM2-208ENST00000375661 PLSCR1O15162 318 aa17.46■□□□□ 0.39
LSM2-208ENST00000375661 NBPF1Q3BBV0 1214 aa17.46■□□□□ 0.39
LSM2-208ENST00000375661 PIK3C2AO00443 1686 aa17.45■□□□□ 0.38
LSM2-208ENST00000375661 KCNQ2O43526 872 aa17.45■□□□□ 0.38
LSM2-208ENST00000375661 SIN3AQ96ST3 1273 aa17.45■□□□□ 0.38
LSM2-208ENST00000375661 CASZ1Q86V15 1759 aa17.44■□□□□ 0.38
LSM2-208ENST00000375661 NLRP6P59044 892 aa17.44■□□□□ 0.38
LSM2-208ENST00000375661 DDB1Q16531 1140 aa17.44■□□□□ 0.38
LSM2-208ENST00000375661 CABP2Q9NPB3 220 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms