RNA–Protein interactions for RNA: ENST00000375391.5

TMCO3-201, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 1 (best) BASIC

Gene TMCO3, Length 2,132 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-201ENST00000375391 PAK3O75914 559 aaPredicted RBP27.59■■■□□ 2.01
TMCO3-201ENST00000375391 EDC4Q6P2E9 1401 aaKnown RBP27.59■■■□□ 2.01
TMCO3-201ENST00000375391 PSME1Q06323 249 aa27.59■■■□□ 2.01
TMCO3-201ENST00000375391 BRINP3Q76B58 766 aa27.59■■■□□ 2.01
TMCO3-201ENST00000375391 MON2Q7Z3U7 1717 aa27.58■■■□□ 2.01
TMCO3-201ENST00000375391 PLEKHG5O94827 1062 aa27.58■■■□□ 2.01
TMCO3-201ENST00000375391 MORC1Q86VD1 984 aa27.58■■■□□ 2.01
TMCO3-201ENST00000375391 SSH2Q76I76 1423 aa27.57■■■□□ 2
TMCO3-201ENST00000375391 RALBP1Q15311 655 aa27.57■■■□□ 2
TMCO3-201ENST00000375391 NPC1L1Q9UHC9 1359 aa27.55■■■□□ 2
TMCO3-201ENST00000375391 PPP2R1AP30153 589 aa27.55■■■□□ 2
TMCO3-201ENST00000375391 MYBBP1AQ9BQG0 1328 aaKnown RBP27.53■■■□□ 2
TMCO3-201ENST00000375391 SOX12O15370 315 aa27.53■■■□□ 2
TMCO3-201ENST00000375391 NRKQ7Z2Y5 1582 aa27.53■■■□□ 2
TMCO3-201ENST00000375391 KRT28Q7Z3Y7 464 aa27.52■■■□□ 2
TMCO3-201ENST00000375391 MRS2Q9HD23 443 aa27.51■■□□□ 1.99
TMCO3-201ENST00000375391 LMOD2Q6P5Q4 547 aa27.49■■□□□ 1.99
TMCO3-201ENST00000375391 ABTB2Q8N961 1025 aa27.49■■□□□ 1.99
TMCO3-201ENST00000375391 CCER2I3L3R5 266 aa27.49■■□□□ 1.99
TMCO3-201ENST00000375391 NLRP6P59044 892 aa27.47■■□□□ 1.99
TMCO3-201ENST00000375391 KIF20BQ96Q89 1820 aa27.46■■□□□ 1.99
TMCO3-201ENST00000375391 COG3Q96JB2 828 aa27.46■■□□□ 1.99
TMCO3-201ENST00000375391 PIP4K2BP78356 416 aa27.45■■□□□ 1.98
TMCO3-201ENST00000375391 YTHDC1Q96MU7 727 aaKnown RBP27.45■■□□□ 1.98
TMCO3-201ENST00000375391 NSD2O96028 1365 aa27.45■■□□□ 1.98
TMCO3-201ENST00000375391 NLRP13Q86W25 1043 aa27.44■■□□□ 1.98
TMCO3-201ENST00000375391 PIK3C2AO00443 1686 aa27.44■■□□□ 1.98
TMCO3-201ENST00000375391 RRS1Q15050 365 aaKnown RBP27.44■■□□□ 1.98
TMCO3-201ENST00000375391 MTHFSP49914 203 aa27.43■■□□□ 1.98
TMCO3-201ENST00000375391 TTC21AQ8NDW8 1320 aa27.42■■□□□ 1.98
TMCO3-201ENST00000375391 FAM9BQ8IZU0 186 aa27.41■■□□□ 1.98
TMCO3-201ENST00000375391 SENP3-EIF4A1A0A087X0R7 540 aa27.41■■□□□ 1.98
TMCO3-201ENST00000375391 PPM1GO15355 546 aaPredicted RBP27.41■■□□□ 1.98
TMCO3-201ENST00000375391 NPHP3Q7Z494 1330 aa27.41■■□□□ 1.98
TMCO3-201ENST00000375391 OVOS2A0A0J9YW53 1432 aa27.41■■□□□ 1.98
TMCO3-201ENST00000375391 OVOS2Q6IE36 1432 aa27.41■■□□□ 1.98
TMCO3-201ENST00000375391 KIF1AQ12756 1690 aa27.4■■□□□ 1.98
TMCO3-201ENST00000375391 EMILIN1Q9Y6C2 1016 aa27.4■■□□□ 1.98
TMCO3-201ENST00000375391 SCAF1Q9H7N4 1312 aaKnown RBP27.4■■□□□ 1.98
TMCO3-201ENST00000375391 UBAP1LF5GYI3 381 aa27.38■■□□□ 1.97
TMCO3-201ENST00000375391 CERKQ8TCT0 537 aa27.38■■□□□ 1.97
TMCO3-201ENST00000375391 PXDNQ92626 1479 aa27.38■■□□□ 1.97
TMCO3-201ENST00000375391 CABLES1Q8TDN4 633 aa27.37■■□□□ 1.97
TMCO3-201ENST00000375391 POLKQ9UBT6 870 aa27.37■■□□□ 1.97
TMCO3-201ENST00000375391 TRPM3Q9HCF6 1732 aaPredicted RBP27.37■■□□□ 1.97
TMCO3-201ENST00000375391 ANKRD26Q9UPS8 1709 aa27.37■■□□□ 1.97
TMCO3-201ENST00000375391 BRD4O60885 1362 aaPredicted RBP27.36■■□□□ 1.97
TMCO3-201ENST00000375391 ROBO1Q9Y6N7 1651 aa27.35■■□□□ 1.97
TMCO3-201ENST00000375391 PNISRQ8TF01 805 aaKnown RBP27.34■■□□□ 1.97
TMCO3-201ENST00000375391 MARF1Q9Y4F3 1742 aaKnown RBP27.34■■□□□ 1.97
TMCO3-201ENST00000375391 USP31Q70CQ4 1352 aa27.33■■□□□ 1.97
TMCO3-201ENST00000375391 SOS2Q07890 1332 aaPredicted RBP27.33■■□□□ 1.97
TMCO3-201ENST00000375391 TOM1O60784 492 aa27.33■■□□□ 1.97
TMCO3-201ENST00000375391 SPATA31A3Q5VYP0 1347 aa27.31■■□□□ 1.96
TMCO3-201ENST00000375391 MAP2P11137 1827 aaKnown RBP27.3■■□□□ 1.96
TMCO3-201ENST00000375391 ZBTB7CA1YPR0 619 aa27.28■■□□□ 1.96
TMCO3-201ENST00000375391 MAP3K19Q56UN5 1328 aa27.27■■□□□ 1.96
TMCO3-201ENST00000375391 TNS3Q68CZ2 1445 aa27.27■■□□□ 1.96
TMCO3-201ENST00000375391 SBNO1A3KN83 1393 aa27.27■■□□□ 1.96
TMCO3-201ENST00000375391 ALS2Q96Q42 1657 aa27.27■■□□□ 1.96
TMCO3-201ENST00000375391 GCP02774 474 aa27.26■■□□□ 1.95
TMCO3-201ENST00000375391 HSP90AB2PQ58FF8 381 aa27.25■■□□□ 1.95
TMCO3-201ENST00000375391 AATKQ6ZMQ8 1374 aa27.25■■□□□ 1.95
TMCO3-201ENST00000375391 ADAMTS8Q9UP79 889 aa27.24■■□□□ 1.95
TMCO3-201ENST00000375391 NHSL1Q5SYE7 1610 aa27.24■■□□□ 1.95
TMCO3-201ENST00000375391 ZC3H6P61129 1189 aaKnown RBP27.23■■□□□ 1.95
TMCO3-201ENST00000375391 MED1Q15648 1581 aaPredicted RBP27.23■■□□□ 1.95
TMCO3-201ENST00000375391 PEAK1Q9H792 1746 aa27.21■■□□□ 1.95
TMCO3-201ENST00000375391 USP19O94966 1318 aa27.21■■□□□ 1.95
TMCO3-201ENST00000375391 NFAT5O94916 1531 aa27.18■■□□□ 1.94
TMCO3-201ENST00000375391 PNPLA6Q8IY17 1366 aa27.18■■□□□ 1.94
TMCO3-201ENST00000375391 COL3A1P02461 1466 aaPredicted RBP27.18■■□□□ 1.94
TMCO3-201ENST00000375391 AMPHP49418 695 aa27.17■■□□□ 1.94
TMCO3-201ENST00000375391 PELP1Q8IZL8 1130 aaKnown RBP27.17■■□□□ 1.94
TMCO3-201ENST00000375391 U2SURPO15042 1029 aaKnown RBP27.16■■□□□ 1.94
TMCO3-201ENST00000375391 CFAP53Q96M91 514 aa27.16■■□□□ 1.94
TMCO3-201ENST00000375391 USP54Q70EL1 1684 aa27.16■■□□□ 1.94
TMCO3-201ENST00000375391 CCDC146Q8IYE0 955 aa27.16■■□□□ 1.94
TMCO3-201ENST00000375391 WDR43Q15061 677 aaKnown RBP eCLIP27.15■■□□□ 1.94
TMCO3-201ENST00000375391 SMG6Q86US8 1419 aaKnown RBP27.15■■□□□ 1.94
TMCO3-201ENST00000375391 ARHGEF10O15013 1369 aa27.15■■□□□ 1.94
TMCO3-201ENST00000375391 CHRNA2Q15822 529 aa27.14■■□□□ 1.94
TMCO3-201ENST00000375391 KCNH5Q8NCM2 988 aa27.14■■□□□ 1.94
TMCO3-201ENST00000375391 LTV1Q96GA3 475 aaPredicted RBP27.14■■□□□ 1.94
TMCO3-201ENST00000375391 AXIN2Q9Y2T1 843 aa27.14■■□□□ 1.94
TMCO3-201ENST00000375391 SLIT3O75094 1523 aa27.14■■□□□ 1.94
TMCO3-201ENST00000375391 SHPRHQ149N8 1683 aa27.14■■□□□ 1.93
TMCO3-201ENST00000375391 DIAPH1O60610 1272 aaKnown RBP27.14■■□□□ 1.93
TMCO3-201ENST00000375391 HOXC9P31274 260 aa27.14■■□□□ 1.93
TMCO3-201ENST00000375391 ARHGEF25Q86VW2 580 aa27.14■■□□□ 1.93
TMCO3-201ENST00000375391 LRRC59Q96AG4 307 aaKnown RBP27.14■■□□□ 1.93
TMCO3-201ENST00000375391 AHDC1Q5TGY3 1603 aaPredicted RBP27.14■■□□□ 1.93
TMCO3-201ENST00000375391 EIF4A2Q14240 407 aaKnown RBP27.13■■□□□ 1.93
TMCO3-201ENST00000375391 IL13P35225 146 aa27.12■■□□□ 1.93
TMCO3-201ENST00000375391 IQSEC2Q5JU85 1478 aa27.12■■□□□ 1.93
TMCO3-201ENST00000375391 U2AF1L5P0DN76 240 aaPredicted RBP27.11■■□□□ 1.93
TMCO3-201ENST00000375391 HNRNPUQ00839 825 aaKnown RBP eCLIP27.11■■□□□ 1.93
TMCO3-201ENST00000375391 U2AF1Q01081 240 aaKnown RBP eCLIP27.11■■□□□ 1.93
TMCO3-201ENST00000375391 SALL2Q9Y467 1007 aaPredicted RBP27.11■■□□□ 1.93
TMCO3-201ENST00000375391 PHLPP1O60346 1717 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms