RNA–Protein interactions for RNA: ENST00000374866.7

COL5A2-201, Transcript of collagen type V alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A2, Length 6,949 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2-201ENST00000374866 TSPYL1Q9H0U9 437 aa13.45□□□□□ -0.26
COL5A2-201ENST00000374866 ECM2O94769 699 aaPredicted RBP13.45□□□□□ -0.26
COL5A2-201ENST00000374866 SSBP05455 408 aaKnown RBP eCLIP13.45□□□□□ -0.26
COL5A2-201ENST00000374866 XBP1P17861 261 aa13.45□□□□□ -0.26
COL5A2-201ENST00000374866 SPDYE4A6NLX3 237 aa13.45□□□□□ -0.26
COL5A2-201ENST00000374866 NEBLO76041 1014 aa13.45□□□□□ -0.26
COL5A2-201ENST00000374866 TMEM132EQ6IEE7 984 aa13.45□□□□□ -0.26
COL5A2-201ENST00000374866 ZNF219Q9P2Y4 722 aaPredicted RBP13.45□□□□□ -0.26
COL5A2-201ENST00000374866 ERC2O15083 957 aa13.44□□□□□ -0.26
COL5A2-201ENST00000374866 TRIM5Q9C035 493 aa13.44□□□□□ -0.26
COL5A2-201ENST00000374866 ABTB2Q8N961 1025 aa13.44□□□□□ -0.26
COL5A2-201ENST00000374866 USP5P45974 858 aa13.43□□□□□ -0.26
COL5A2-201ENST00000374866 TRMT1LQ7Z2T5 733 aaKnown RBP13.43□□□□□ -0.26
COL5A2-201ENST00000374866 DDX19BQ9UMR2 479 aa13.43□□□□□ -0.26
COL5A2-201ENST00000374866 TBC1D2BQ9UPU7 963 aa13.43□□□□□ -0.26
COL5A2-201ENST00000374866 XPCQ01831 940 aaPredicted RBP13.43□□□□□ -0.26
COL5A2-201ENST00000374866 CAVIN1Q6NZI2 390 aaKnown RBP13.43□□□□□ -0.26
COL5A2-201ENST00000374866 FHOD3Q2V2M9 1422 aa13.43□□□□□ -0.26
COL5A2-201ENST00000374866 CCDC191Q8NCU4 936 aa13.43□□□□□ -0.26
COL5A2-201ENST00000374866 CC2D2AQ9P2K1 1620 aa13.42□□□□□ -0.26
COL5A2-201ENST00000374866 CCDC144AA2RUR9 1427 aa13.42□□□□□ -0.26
COL5A2-201ENST00000374866 CNTROBQ8N137 903 aa13.42□□□□□ -0.26
COL5A2-201ENST00000374866 RSPH6AQ9H0K4 717 aa13.42□□□□□ -0.26
COL5A2-201ENST00000374866 SURF6O75683 361 aaKnown RBP13.41□□□□□ -0.26
COL5A2-201ENST00000374866 NLRP6P59044 892 aa13.41□□□□□ -0.26
COL5A2-201ENST00000374866 DEF6Q9H4E7 631 aa13.41□□□□□ -0.26
COL5A2-201ENST00000374866 ARGLU1Q9NWB6 273 aaPredicted RBP13.41□□□□□ -0.26
COL5A2-201ENST00000374866 TAF3Q5VWG9 929 aa13.41□□□□□ -0.26
COL5A2-201ENST00000374866 FIBPO43427 364 aa13.41□□□□□ -0.26
COL5A2-201ENST00000374866 FKBP4Q02790 459 aaKnown RBP eCLIP13.41□□□□□ -0.26
COL5A2-201ENST00000374866 SART3Q15020 963 aaKnown RBP13.4□□□□□ -0.26
COL5A2-201ENST00000374866 C22orf23Q9BZE7 217 aa13.4□□□□□ -0.26
COL5A2-201ENST00000374866 NAT10Q9H0A0 1025 aaKnown RBP13.4□□□□□ -0.26
COL5A2-201ENST00000374866 NINLQ9Y2I6 1382 aa13.4□□□□□ -0.26
COL5A2-201ENST00000374866 SLC4A8Q2Y0W8 1093 aa13.4□□□□□ -0.26
COL5A2-201ENST00000374866 PTPRGP23470 1445 aa13.39□□□□□ -0.27
COL5A2-201ENST00000374866 RDXP35241 583 aaKnown RBP13.39□□□□□ -0.27
COL5A2-201ENST00000374866 NOM1Q5C9Z4 860 aaKnown RBP13.39□□□□□ -0.27
COL5A2-201ENST00000374866 ACBD3Q9H3P7 528 aa13.39□□□□□ -0.27
COL5A2-201ENST00000374866 PRPF40AO75400 957 aaKnown RBP13.39□□□□□ -0.27
COL5A2-201ENST00000374866 VGFO15240 615 aaPredicted RBP13.39□□□□□ -0.27
COL5A2-201ENST00000374866 SERPINC1P01008 464 aa13.39□□□□□ -0.27
COL5A2-201ENST00000374866 LIG1P18858 919 aa13.39□□□□□ -0.27
COL5A2-201ENST00000374866 CA8P35219 290 aa13.39□□□□□ -0.27
COL5A2-201ENST00000374866 TMX1Q9H3N1 280 aa13.39□□□□□ -0.27
COL5A2-201ENST00000374866 GRM1Q13255 1194 aa13.39□□□□□ -0.27
COL5A2-201ENST00000374866 WDR78Q5VTH9 848 aa13.39□□□□□ -0.27
COL5A2-201ENST00000374866 SLC3A2P08195 630 aaKnown RBP13.38□□□□□ -0.27
COL5A2-201ENST00000374866 ZNF76P36508 570 aa13.38□□□□□ -0.27
COL5A2-201ENST00000374866 CCDC69A6NI79 296 aa13.38□□□□□ -0.27
COL5A2-201ENST00000374866 DCTN1Q14203 1278 aa13.38□□□□□ -0.27
COL5A2-201ENST00000374866 FAM43AQ8N2R8 423 aa13.38□□□□□ -0.27
COL5A2-201ENST00000374866 SCLT1Q96NL6 688 aa13.37□□□□□ -0.27
COL5A2-201ENST00000374866 API5Q9BZZ5 524 aaKnown RBP13.37□□□□□ -0.27
COL5A2-201ENST00000374866 CT47B1P0C2W7 299 aaPredicted RBP13.37□□□□□ -0.27
COL5A2-201ENST00000374866 CCDC181Q5TID7 509 aa13.37□□□□□ -0.27
COL5A2-201ENST00000374866 MYO6Q9UM54 1294 aa13.37□□□□□ -0.27
COL5A2-201ENST00000374866 TXLNAP40222 546 aa13.37□□□□□ -0.27
COL5A2-201ENST00000374866 NASPP49321 788 aaPredicted RBP13.37□□□□□ -0.27
COL5A2-201ENST00000374866 FILIP1LQ4L180 1135 aa13.37□□□□□ -0.27
COL5A2-201ENST00000374866 TOM1L2Q6ZVM7 507 aa13.37□□□□□ -0.27
COL5A2-201ENST00000374866 DHX8Q14562 1220 aaKnown RBP13.36□□□□□ -0.27
COL5A2-201ENST00000374866 SMARCE1Q969G3 411 aa13.36□□□□□ -0.27
COL5A2-201ENST00000374866 C11orf95C9JLR9 678 aaPredicted RBP13.36□□□□□ -0.27
COL5A2-201ENST00000374866 CABP4P57796 275 aa13.36□□□□□ -0.27
COL5A2-201ENST00000374866 TTLL12Q14166 644 aaPredicted RBP13.36□□□□□ -0.27
COL5A2-201ENST00000374866 NFKBIBQ15653 356 aa13.36□□□□□ -0.27
COL5A2-201ENST00000374866 CHMP5Q9NZZ3 219 aa13.36□□□□□ -0.27
COL5A2-201ENST00000374866 HSP90AB4PQ58FF6 505 aa13.36□□□□□ -0.27
COL5A2-201ENST00000374866 KINO60870 393 aaKnown RBP13.36□□□□□ -0.27
COL5A2-201ENST00000374866 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.36□□□□□ -0.27
COL5A2-201ENST00000374866 AQRO60306 1485 aaKnown RBP eCLIP13.35□□□□□ -0.27
COL5A2-201ENST00000374866 ROCK1Q13464 1354 aa13.35□□□□□ -0.27
COL5A2-201ENST00000374866 STK38Q15208 465 aa13.35□□□□□ -0.27
COL5A2-201ENST00000374866 FMN1Q68DA7 1419 aa13.35□□□□□ -0.27
COL5A2-201ENST00000374866 RAD54L2Q9Y4B4 1467 aa13.35□□□□□ -0.27
COL5A2-201ENST00000374866 PSMA5P28066 241 aa13.35□□□□□ -0.27
COL5A2-201ENST00000374866 PDE3BQ13370 1112 aa13.35□□□□□ -0.27
COL5A2-201ENST00000374866 CCDC158Q5M9N0 1113 aa13.35□□□□□ -0.27
COL5A2-201ENST00000374866 RUNDC1Q96C34 613 aa13.35□□□□□ -0.27
COL5A2-201ENST00000374866 DNA2P51530 1060 aa13.35□□□□□ -0.27
COL5A2-201ENST00000374866 NEK4P51957 841 aa13.35□□□□□ -0.27
COL5A2-201ENST00000374866 TNNT1P13805 278 aa13.34□□□□□ -0.27
COL5A2-201ENST00000374866 PUS7Q96PZ0 661 aaKnown RBP13.34□□□□□ -0.27
COL5A2-201ENST00000374866 USP47Q96K76 1375 aa13.34□□□□□ -0.27
COL5A2-201ENST00000374866 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.34□□□□□ -0.27
COL5A2-201ENST00000374866 LRRFIP2Q9Y608 721 aaKnown RBP13.34□□□□□ -0.27
COL5A2-201ENST00000374866 ZRSR2Q15696 482 aaKnown RBP13.33□□□□□ -0.27
COL5A2-201ENST00000374866 WWC3Q9ULE0 1092 aa13.33□□□□□ -0.28
COL5A2-201ENST00000374866 RAPGEF2Q9Y4G8 1499 aa13.33□□□□□ -0.28
COL5A2-201ENST00000374866 PHLDB1Q86UU1 1377 aa13.33□□□□□ -0.28
COL5A2-201ENST00000374866 ME1P48163 572 aa13.32□□□□□ -0.28
COL5A2-201ENST00000374866 TSPY26PQ9H489 355 aa13.32□□□□□ -0.28
COL5A2-201ENST00000374866 CDC45O75419 566 aa13.32□□□□□ -0.28
COL5A2-201ENST00000374866 SOGA3Q5TF21 947 aa13.32□□□□□ -0.28
COL5A2-201ENST00000374866 TSR2Q969E8 191 aaKnown RBP13.32□□□□□ -0.28
COL5A2-201ENST00000374866 CCDC113Q9H0I3 377 aa13.32□□□□□ -0.28
COL5A2-201ENST00000374866 PODXL2Q9NZ53 605 aa13.32□□□□□ -0.28
COL5A2-201ENST00000374866 RAI14Q9P0K7 980 aa13.32□□□□□ -0.28
COL5A2-201ENST00000374866 CLASRPQ8N2M8 674 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms