RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 C20orf194Q5TEA3 1177 aa18.11■□□□□ 0.49
HMGCL-203ENST00000374490 RUNDC1Q96C34 613 aa18.11■□□□□ 0.49
HMGCL-203ENST00000374490 RBM33Q96EV2 1170 aaKnown RBP18.1■□□□□ 0.49
HMGCL-203ENST00000374490 SLC12A5Q9H2X9 1139 aa18.1■□□□□ 0.49
HMGCL-203ENST00000374490 MSH6P52701 1360 aa18.09■□□□□ 0.49
HMGCL-203ENST00000374490 DLC1Q96QB1 1528 aa18.09■□□□□ 0.49
HMGCL-203ENST00000374490 POGKQ9P215 609 aa18.09■□□□□ 0.49
HMGCL-203ENST00000374490 PDE3AQ14432 1141 aa18.08■□□□□ 0.48
HMGCL-203ENST00000374490 PLEKHG1Q9ULL1 1385 aa18.07■□□□□ 0.48
HMGCL-203ENST00000374490 CCDC27Q2M243 656 aa18.07■□□□□ 0.48
HMGCL-203ENST00000374490 WDR63Q8IWG1 891 aa18.07■□□□□ 0.48
HMGCL-203ENST00000374490 WWC1Q8IX03 1113 aa18.07■□□□□ 0.48
HMGCL-203ENST00000374490 DDRGK1Q96HY6 314 aa18.07■□□□□ 0.48
HMGCL-203ENST00000374490 ATAD2Q6PL18 1390 aa18.07■□□□□ 0.48
HMGCL-203ENST00000374490 PAK3O75914 559 aaPredicted RBP18.06■□□□□ 0.48
HMGCL-203ENST00000374490 AAMPQ13685 434 aa18.06■□□□□ 0.48
HMGCL-203ENST00000374490 KNDC1Q76NI1 1749 aa18.06■□□□□ 0.48
HMGCL-203ENST00000374490 PRAM1Q96QH2 718 aa18.05■□□□□ 0.48
HMGCL-203ENST00000374490 SPINK5Q9NQ38 1064 aaPredicted RBP18.05■□□□□ 0.48
HMGCL-203ENST00000374490 RGS17Q9UGC6 210 aaPredicted RBP18.05■□□□□ 0.48
HMGCL-203ENST00000374490 SAFB2Q14151 953 aaKnown RBP eCLIP18.05■□□□□ 0.48
HMGCL-203ENST00000374490 NWD1Q149M9 1564 aa18.04■□□□□ 0.48
HMGCL-203ENST00000374490 SLAIN2Q9P270 581 aa18.03■□□□□ 0.48
HMGCL-203ENST00000374490 ABCC11Q96J66 1382 aa18.03■□□□□ 0.48
HMGCL-203ENST00000374490 XIRP1Q702N8 1843 aaKnown RBP18.02■□□□□ 0.48
HMGCL-203ENST00000374490 MTHFSP49914 203 aa18.02■□□□□ 0.48
HMGCL-203ENST00000374490 TBX22Q9Y458 520 aa18.02■□□□□ 0.48
HMGCL-203ENST00000374490 METP08581 1390 aa18.01■□□□□ 0.47
HMGCL-203ENST00000374490 NPM2Q86SE8 214 aaKnown RBP18.01■□□□□ 0.47
HMGCL-203ENST00000374490 C14orf37Q86TY3 774 aa18.01■□□□□ 0.47
HMGCL-203ENST00000374490 MINK1Q8N4C8 1332 aaPredicted RBP18.01■□□□□ 0.47
HMGCL-203ENST00000374490 TCP11L2Q8N4U5 519 aa18.01■□□□□ 0.47
HMGCL-203ENST00000374490 ADGRB2O60241 1585 aa18■□□□□ 0.47
HMGCL-203ENST00000374490 ADAMTS13Q76LX8 1427 aa18■□□□□ 0.47
HMGCL-203ENST00000374490 FAM161AQ3B820 660 aa18■□□□□ 0.47
HMGCL-203ENST00000374490 ROBO1Q9Y6N7 1651 aa18■□□□□ 0.47
HMGCL-203ENST00000374490 BCAR3O75815 825 aa17.99■□□□□ 0.47
HMGCL-203ENST00000374490 SRPK2P78362 688 aaKnown RBP17.99■□□□□ 0.47
HMGCL-203ENST00000374490 DIP2AQ14689 1571 aa17.99■□□□□ 0.47
HMGCL-203ENST00000374490 TECPR2O15040 1411 aa17.99■□□□□ 0.47
HMGCL-203ENST00000374490 CANXP27824 592 aaKnown RBP17.98■□□□□ 0.47
HMGCL-203ENST00000374490 TNNT2P45379 298 aaPredicted RBP17.98■□□□□ 0.47
HMGCL-203ENST00000374490 MYH16Q9H6N6 1097 aa17.98■□□□□ 0.47
HMGCL-203ENST00000374490 TERF2IPQ9NYB0 399 aa17.98■□□□□ 0.47
HMGCL-203ENST00000374490 NCOA3Q9Y6Q9 1424 aa17.98■□□□□ 0.47
HMGCL-203ENST00000374490 CT47B1P0C2W7 299 aaPredicted RBP17.98■□□□□ 0.47
HMGCL-203ENST00000374490 CABP2Q9NPB3 220 aa17.98■□□□□ 0.47
HMGCL-203ENST00000374490 A0A1W2PP64 1363 aa17.97■□□□□ 0.47
HMGCL-203ENST00000374490 JCADQ9P266 1359 aa17.97■□□□□ 0.47
HMGCL-203ENST00000374490 RTL5Q5HYW3 569 aaPredicted RBP17.97■□□□□ 0.47
HMGCL-203ENST00000374490 POTEAQ6S8J7 498 aa17.97■□□□□ 0.47
HMGCL-203ENST00000374490 ANKRD26Q9UPS8 1709 aa17.97■□□□□ 0.47
HMGCL-203ENST00000374490 CADPS2Q86UW7 1296 aa17.95■□□□□ 0.46
HMGCL-203ENST00000374490 SIRT1Q96EB6 747 aa17.95■□□□□ 0.46
HMGCL-203ENST00000374490 PIK3R4Q99570 1358 aa17.95■□□□□ 0.46
HMGCL-203ENST00000374490 RARSP54136 660 aaKnown RBP17.94■□□□□ 0.46
HMGCL-203ENST00000374490 CLUAP1Q96AJ1 413 aa17.94■□□□□ 0.46
HMGCL-203ENST00000374490 ATF3P18847 181 aa17.94■□□□□ 0.46
HMGCL-203ENST00000374490 HDGFL2Q7Z4V5 671 aaPredicted RBP17.94■□□□□ 0.46
HMGCL-203ENST00000374490 WAPLQ7Z5K2 1190 aa17.94■□□□□ 0.46
HMGCL-203ENST00000374490 C19orf44Q9H6X5 657 aa17.94■□□□□ 0.46
HMGCL-203ENST00000374490 MAPK8IP3Q9UPT6 1336 aa17.93■□□□□ 0.46
HMGCL-203ENST00000374490 PPM1GO15355 546 aaPredicted RBP17.93■□□□□ 0.46
HMGCL-203ENST00000374490 U2AF1L5P0DN76 240 aaPredicted RBP17.93■□□□□ 0.46
HMGCL-203ENST00000374490 U2AF1Q01081 240 aaKnown RBP eCLIP17.93■□□□□ 0.46
HMGCL-203ENST00000374490 PNNQ9H307 717 aaKnown RBP17.93■□□□□ 0.46
HMGCL-203ENST00000374490 COL3A1P02461 1466 aaPredicted RBP17.93■□□□□ 0.46
HMGCL-203ENST00000374490 PMFBP1Q8TBY8 1022 aa17.91■□□□□ 0.46
HMGCL-203ENST00000374490 CDK19Q9BWU1 502 aa17.91■□□□□ 0.46
HMGCL-203ENST00000374490 USP35Q9P2H5 1018 aa17.91■□□□□ 0.46
HMGCL-203ENST00000374490 NBR1Q14596 966 aa17.9■□□□□ 0.46
HMGCL-203ENST00000374490 NEUROD2Q15784 382 aa17.9■□□□□ 0.46
HMGCL-203ENST00000374490 C8orf34Q49A92 452 aa17.9■□□□□ 0.46
HMGCL-203ENST00000374490 AMOTL2Q9Y2J4 779 aa17.9■□□□□ 0.46
HMGCL-203ENST00000374490 RRP7AQ9Y3A4 280 aaKnown RBP17.9■□□□□ 0.46
HMGCL-203ENST00000374490 IL16Q14005 1332 aa17.9■□□□□ 0.46
HMGCL-203ENST00000374490 CD163L1Q9NR16 1453 aa17.9■□□□□ 0.46
HMGCL-203ENST00000374490 SPATA31A6Q5VVP1 1343 aa17.89■□□□□ 0.46
HMGCL-203ENST00000374490 MEX3CQ5U5Q3 659 aaKnown RBP17.88■□□□□ 0.45
HMGCL-203ENST00000374490 ATP7BP35670 1465 aa17.88■□□□□ 0.45
HMGCL-203ENST00000374490 ROBO2Q9HCK4 1378 aa17.88■□□□□ 0.45
HMGCL-203ENST00000374490 CHD2O14647 1828 aaKnown RBP17.88■□□□□ 0.45
HMGCL-203ENST00000374490 PHLPP1O60346 1717 aa17.87■□□□□ 0.45
HMGCL-203ENST00000374490 DEKP35659 375 aaKnown RBP17.87■□□□□ 0.45
HMGCL-203ENST00000374490 SKAP1Q86WV1 359 aa17.87■□□□□ 0.45
HMGCL-203ENST00000374490 COG6Q9Y2V7 657 aa17.87■□□□□ 0.45
HMGCL-203ENST00000374490 CDC42BPGQ6DT37 1551 aa17.87■□□□□ 0.45
HMGCL-203ENST00000374490 WASLO00401 505 aaPredicted RBP17.87■□□□□ 0.45
HMGCL-203ENST00000374490 PANK1Q8TE04 598 aa17.87■□□□□ 0.45
HMGCL-203ENST00000374490 PTCH1Q13635 1447 aa17.86■□□□□ 0.45
HMGCL-203ENST00000374490 PTPRUQ92729 1446 aa17.86■□□□□ 0.45
HMGCL-203ENST00000374490 FYB1O15117 783 aa17.86■□□□□ 0.45
HMGCL-203ENST00000374490 RGS3P49796 1198 aa17.86■□□□□ 0.45
HMGCL-203ENST00000374490 FRAT1Q92837 279 aaPredicted RBP17.86■□□□□ 0.45
HMGCL-203ENST00000374490 PLEKHF1Q96S99 279 aa17.86■□□□□ 0.45
HMGCL-203ENST00000374490 GGNBP2Q9H3C7 697 aa17.86■□□□□ 0.45
HMGCL-203ENST00000374490 XRN1Q8IZH2 1706 aaKnown RBP17.86■□□□□ 0.45
HMGCL-203ENST00000374490 PNPLA6Q8IY17 1366 aa17.85■□□□□ 0.45
HMGCL-203ENST00000374490 KIF20BQ96Q89 1820 aa17.85■□□□□ 0.45
HMGCL-203ENST00000374490 DAXXQ9UER7 740 aaPredicted RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms