RNA–Protein interactions for RNA: ENST00000374232.7

SNX30-201, Transcript of sorting nexin family member 30, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX30, Length 7,622 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30-201ENST00000374232 PPM1FP49593 454 aaPredicted RBP17.37■□□□□ 0.37
SNX30-201ENST00000374232 TAF3Q5VWG9 929 aa17.37■□□□□ 0.37
SNX30-201ENST00000374232 SERPINC1P01008 464 aa17.36■□□□□ 0.37
SNX30-201ENST00000374232 CHMP4BP1P59074 171 aa17.36■□□□□ 0.37
SNX30-201ENST00000374232 NOB1Q9ULX3 412 aaKnown RBP17.36■□□□□ 0.37
SNX30-201ENST00000374232 CARMIL2Q6F5E8 1435 aa17.36■□□□□ 0.37
SNX30-201ENST00000374232 PDZRN3Q9UPQ7 1066 aa17.36■□□□□ 0.37
SNX30-201ENST00000374232 ENOX2Q16206 610 aaKnown RBP17.36■□□□□ 0.37
SNX30-201ENST00000374232 ERC2O15083 957 aa17.36■□□□□ 0.37
SNX30-201ENST00000374232 CNTROBQ8N137 903 aa17.36■□□□□ 0.37
SNX30-201ENST00000374232 PHLDB1Q86UU1 1377 aa17.35■□□□□ 0.37
SNX30-201ENST00000374232 RDXP35241 583 aaKnown RBP17.35■□□□□ 0.37
SNX30-201ENST00000374232 CDC45O75419 566 aa17.35■□□□□ 0.37
SNX30-201ENST00000374232 API5Q9BZZ5 524 aaKnown RBP17.35■□□□□ 0.37
SNX30-201ENST00000374232 RAPGEF4Q8WZA2 1011 aa17.34■□□□□ 0.37
SNX30-201ENST00000374232 RBM5P52756 815 aaKnown RBP eCLIP17.34■□□□□ 0.37
SNX30-201ENST00000374232 SEPT7Q16181 437 aaKnown RBP17.34■□□□□ 0.37
SNX30-201ENST00000374232 XBP1P17861 261 aa17.34■□□□□ 0.37
SNX30-201ENST00000374232 CAMK4Q16566 473 aa17.34■□□□□ 0.37
SNX30-201ENST00000374232 TRERF1Q96PN7 1200 aa17.34■□□□□ 0.37
SNX30-201ENST00000374232 ZFP91Q96JP5 570 aaPredicted RBP17.34■□□□□ 0.37
SNX30-201ENST00000374232 MAGEC2Q9UBF1 373 aaPredicted RBP17.34■□□□□ 0.37
SNX30-201ENST00000374232 ATF3P18847 181 aa17.33■□□□□ 0.37
SNX30-201ENST00000374232 TTC39AQ5SRH9 613 aa17.33■□□□□ 0.37
SNX30-201ENST00000374232 FANCIQ9NVI1 1328 aa17.33■□□□□ 0.37
SNX30-201ENST00000374232 NAT10Q9H0A0 1025 aaKnown RBP17.33■□□□□ 0.37
SNX30-201ENST00000374232 CT47B1P0C2W7 299 aaPredicted RBP17.33■□□□□ 0.36
SNX30-201ENST00000374232 LARP6Q9BRS8 491 aaKnown RBP17.33■□□□□ 0.36
SNX30-201ENST00000374232 ACBD3Q9H3P7 528 aa17.33■□□□□ 0.36
SNX30-201ENST00000374232 KINO60870 393 aaKnown RBP17.33■□□□□ 0.36
SNX30-201ENST00000374232 RBM25P49756 843 aaKnown RBP17.33■□□□□ 0.36
SNX30-201ENST00000374232 DHX57Q6P158 1386 aaKnown RBP17.33■□□□□ 0.36
SNX30-201ENST00000374232 PDCL3Q9H2J4 239 aa17.33■□□□□ 0.36
SNX30-201ENST00000374232 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.32■□□□□ 0.36
SNX30-201ENST00000374232 NUTM2BA6NNL0 878 aaPredicted RBP17.32■□□□□ 0.36
SNX30-201ENST00000374232 NUTM2EB1AL46 878 aaPredicted RBP17.32■□□□□ 0.36
SNX30-201ENST00000374232 NUTM2AQ8IVF1 878 aaPredicted RBP17.32■□□□□ 0.36
SNX30-201ENST00000374232 MATR3P43243 847 aaKnown RBP eCLIP17.32■□□□□ 0.36
SNX30-201ENST00000374232 MTHFSP49914 203 aa17.32■□□□□ 0.36
SNX30-201ENST00000374232 EXOSC9Q06265 439 aaKnown RBP17.32■□□□□ 0.36
SNX30-201ENST00000374232 CNNM1Q9NRU3 951 aa17.32■□□□□ 0.36
SNX30-201ENST00000374232 ZNF644Q9H582 1327 aaPredicted RBP17.31■□□□□ 0.36
SNX30-201ENST00000374232 SSBP05455 408 aaKnown RBP eCLIP17.31■□□□□ 0.36
SNX30-201ENST00000374232 DNA2P51530 1060 aa17.31■□□□□ 0.36
SNX30-201ENST00000374232 UQCRHLA0A096LP55 91 aa17.3■□□□□ 0.36
SNX30-201ENST00000374232 UQCRHP07919 91 aa17.3■□□□□ 0.36
SNX30-201ENST00000374232 DCTN1Q14203 1278 aa17.3■□□□□ 0.36
SNX30-201ENST00000374232 FKBP4Q02790 459 aaKnown RBP eCLIP17.3■□□□□ 0.36
SNX30-201ENST00000374232 AKNAQ7Z591 1439 aa17.3■□□□□ 0.36
SNX30-201ENST00000374232 STK38Q15208 465 aa17.3■□□□□ 0.36
SNX30-201ENST00000374232 PRDM2Q13029 1718 aa17.3■□□□□ 0.36
SNX30-201ENST00000374232 ME1P48163 572 aa17.3■□□□□ 0.36
SNX30-201ENST00000374232 DEF6Q9H4E7 631 aa17.3■□□□□ 0.36
SNX30-201ENST00000374232 MRE11P49959 708 aa17.29■□□□□ 0.36
SNX30-201ENST00000374232 TTC16Q8NEE8 873 aa17.29■□□□□ 0.36
SNX30-201ENST00000374232 BICDL1Q6ZP65 573 aa17.29■□□□□ 0.36
SNX30-201ENST00000374232 PKNOX2Q96KN3 472 aa17.29■□□□□ 0.36
SNX30-201ENST00000374232 LRRFIP2Q9Y608 721 aaKnown RBP17.28■□□□□ 0.36
SNX30-201ENST00000374232 NINLQ9Y2I6 1382 aa17.28■□□□□ 0.36
SNX30-201ENST00000374232 LEKR1Q6ZMV7 388 aa17.28■□□□□ 0.36
SNX30-201ENST00000374232 TRMT1LQ7Z2T5 733 aaKnown RBP17.28■□□□□ 0.36
SNX30-201ENST00000374232 NLRP6P59044 892 aa17.28■□□□□ 0.36
SNX30-201ENST00000374232 DDX11Q96FC9 970 aa17.28■□□□□ 0.36
SNX30-201ENST00000374232 MIS18AQ9NYP9 233 aa17.28■□□□□ 0.36
SNX30-201ENST00000374232 MYO6Q9UM54 1294 aa17.28■□□□□ 0.36
SNX30-201ENST00000374232 SSR1P43307 286 aaKnown RBP17.27■□□□□ 0.36
SNX30-201ENST00000374232 XPCQ01831 940 aaPredicted RBP17.27■□□□□ 0.36
SNX30-201ENST00000374232 PPFIA3O75145 1194 aa17.27■□□□□ 0.36
SNX30-201ENST00000374232 SRRTQ9BXP5 876 aaKnown RBP17.27■□□□□ 0.36
SNX30-201ENST00000374232 MYCNP04198 464 aaPredicted RBP17.27■□□□□ 0.35
SNX30-201ENST00000374232 ABTB2Q8N961 1025 aa17.27■□□□□ 0.35
SNX30-201ENST00000374232 DHX8Q14562 1220 aaKnown RBP17.27■□□□□ 0.35
SNX30-201ENST00000374232 CWC27Q6UX04 472 aaKnown RBP17.27■□□□□ 0.35
SNX30-201ENST00000374232 TNMDQ9H2S6 317 aa17.27■□□□□ 0.35
SNX30-201ENST00000374232 VGFO15240 615 aaPredicted RBP17.26■□□□□ 0.35
SNX30-201ENST00000374232 SLC4A8Q2Y0W8 1093 aa17.26■□□□□ 0.35
SNX30-201ENST00000374232 KIF6Q6ZMV9 814 aa17.26■□□□□ 0.35
SNX30-201ENST00000374232 KIF7Q2M1P5 1343 aa17.26■□□□□ 0.35
SNX30-201ENST00000374232 SART3Q15020 963 aaKnown RBP17.26■□□□□ 0.35
SNX30-201ENST00000374232 CCDC181Q5TID7 509 aa17.26■□□□□ 0.35
SNX30-201ENST00000374232 TBC1D2BQ9UPU7 963 aa17.26■□□□□ 0.35
SNX30-201ENST00000374232 PSMA5P28066 241 aa17.26■□□□□ 0.35
SNX30-201ENST00000374232 GNAI1P63096 354 aa17.25■□□□□ 0.35
SNX30-201ENST00000374232 ESCO1Q5FWF5 840 aa17.25■□□□□ 0.35
SNX30-201ENST00000374232 IL1RAPL2Q9NP60 686 aa17.25■□□□□ 0.35
SNX30-201ENST00000374232 FILIP1LQ4L180 1135 aa17.25■□□□□ 0.35
SNX30-201ENST00000374232 FILIP1Q7Z7B0 1213 aa17.25■□□□□ 0.35
SNX30-201ENST00000374232 PRKAR2BP31323 418 aa17.25■□□□□ 0.35
SNX30-201ENST00000374232 SLC4A2P04920 1241 aa17.25■□□□□ 0.35
SNX30-201ENST00000374232 CLASRPQ8N2M8 674 aaKnown RBP17.25■□□□□ 0.35
SNX30-201ENST00000374232 USP5P45974 858 aa17.24■□□□□ 0.35
SNX30-201ENST00000374232 SMARCE1Q969G3 411 aa17.24■□□□□ 0.35
SNX30-201ENST00000374232 RAPGEF2Q9Y4G8 1499 aa17.24■□□□□ 0.35
SNX30-201ENST00000374232 ROCK1Q13464 1354 aa17.24■□□□□ 0.35
SNX30-201ENST00000374232 TXLNAP40222 546 aa17.24■□□□□ 0.35
SNX30-201ENST00000374232 TCP11L2Q8N4U5 519 aa17.24■□□□□ 0.35
SNX30-201ENST00000374232 CBX1P83916 185 aa17.23■□□□□ 0.35
SNX30-201ENST00000374232 WDR70Q9NW82 654 aa17.23■□□□□ 0.35
SNX30-201ENST00000374232 GUCY1B3Q02153 619 aa17.23■□□□□ 0.35
SNX30-201ENST00000374232 ZRSR2Q15696 482 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms