RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 STK11IPQ8N1F8 1099 aa17.27■□□□□ 0.35
TRAF1-201ENST00000373887 ERICH2A1L162 156 aa17.27■□□□□ 0.35
TRAF1-201ENST00000373887 SULT6B1Q6IMI4 303 aa17.26■□□□□ 0.35
TRAF1-201ENST00000373887 NOM1Q5C9Z4 860 aaKnown RBP17.26■□□□□ 0.35
TRAF1-201ENST00000373887 DNAJC2Q99543 621 aaKnown RBP17.26■□□□□ 0.35
TRAF1-201ENST00000373887 PRDM11Q9NQV5 511 aa17.26■□□□□ 0.35
TRAF1-201ENST00000373887 CCDC7Q96M83 1385 aa17.26■□□□□ 0.35
TRAF1-201ENST00000373887 CAGE1Q8TC20 777 aa17.25■□□□□ 0.35
TRAF1-201ENST00000373887 POLA1P09884 1462 aaPredicted RBP17.25■□□□□ 0.35
TRAF1-201ENST00000373887 IKQ13123 557 aaPredicted RBP17.25■□□□□ 0.35
TRAF1-201ENST00000373887 BICDL1Q6ZP65 573 aa17.25■□□□□ 0.35
TRAF1-201ENST00000373887 ARGLU1Q9NWB6 273 aaPredicted RBP17.25■□□□□ 0.35
TRAF1-201ENST00000373887 C1orf115Q9H7X2 142 aa17.25■□□□□ 0.35
TRAF1-201ENST00000373887 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.24■□□□□ 0.35
TRAF1-201ENST00000373887 SMC3Q9UQE7 1217 aa17.24■□□□□ 0.35
TRAF1-201ENST00000373887 REC8O95072 547 aa17.24■□□□□ 0.35
TRAF1-201ENST00000373887 PLCD4Q9BRC7 762 aa17.24■□□□□ 0.35
TRAF1-201ENST00000373887 EPS15P42566 896 aa17.24■□□□□ 0.35
TRAF1-201ENST00000373887 CEBPAP49715 358 aaPredicted RBP17.24■□□□□ 0.35
TRAF1-201ENST00000373887 HSP90B2PQ58FF3 399 aa17.23■□□□□ 0.35
TRAF1-201ENST00000373887 GAS2L2Q8NHY3 880 aa17.23■□□□□ 0.35
TRAF1-201ENST00000373887 ROCK1Q13464 1354 aa17.23■□□□□ 0.35
TRAF1-201ENST00000373887 ARAP1Q96P48 1450 aa17.23■□□□□ 0.35
TRAF1-201ENST00000373887 ACBD3Q9H3P7 528 aa17.23■□□□□ 0.35
TRAF1-201ENST00000373887 ADAMTS2O95450 1211 aa17.23■□□□□ 0.35
TRAF1-201ENST00000373887 ERBINQ96RT1 1412 aa17.23■□□□□ 0.35
TRAF1-201ENST00000373887 R3HCC1Q9Y3T6 440 aaKnown RBP17.23■□□□□ 0.35
TRAF1-201ENST00000373887 FAM43AQ8N2R8 423 aa17.22■□□□□ 0.35
TRAF1-201ENST00000373887 ZBED9Q6R2W3 1325 aa17.22■□□□□ 0.35
TRAF1-201ENST00000373887 TCP11L2Q8N4U5 519 aa17.22■□□□□ 0.35
TRAF1-201ENST00000373887 ZNF530Q6P9A1 599 aaPredicted RBP17.22■□□□□ 0.35
TRAF1-201ENST00000373887 RTEL1-TNFRSF6BF6WH68 1400 aa17.22■□□□□ 0.35
TRAF1-201ENST00000373887 H0YHG0 523 aa17.22■□□□□ 0.35
TRAF1-201ENST00000373887 CCDC30Q5VVM6 783 aa17.22■□□□□ 0.35
TRAF1-201ENST00000373887 TSR2Q969E8 191 aaKnown RBP17.21■□□□□ 0.35
TRAF1-201ENST00000373887 CNNM1Q9NRU3 951 aa17.21■□□□□ 0.35
TRAF1-201ENST00000373887 CCDC73Q6ZRK6 1079 aa17.21■□□□□ 0.35
TRAF1-201ENST00000373887 POGZQ7Z3K3 1410 aa17.2■□□□□ 0.34
TRAF1-201ENST00000373887 SIL1Q9H173 461 aa17.2■□□□□ 0.34
TRAF1-201ENST00000373887 RNF20Q5VTR2 975 aa17.2■□□□□ 0.34
TRAF1-201ENST00000373887 CDK13Q14004 1512 aaKnown RBP17.2■□□□□ 0.34
TRAF1-201ENST00000373887 CNTLNQ9NXG0 1405 aa17.19■□□□□ 0.34
TRAF1-201ENST00000373887 WAPLQ7Z5K2 1190 aa17.19■□□□□ 0.34
TRAF1-201ENST00000373887 OFD1O75665 1012 aa17.19■□□□□ 0.34
TRAF1-201ENST00000373887 PPP2R1AP30153 589 aa17.19■□□□□ 0.34
TRAF1-201ENST00000373887 CCDC191Q8NCU4 936 aa17.19■□□□□ 0.34
TRAF1-201ENST00000373887 CHMP5Q9NZZ3 219 aa17.19■□□□□ 0.34
TRAF1-201ENST00000373887 ERC2O15083 957 aa17.19■□□□□ 0.34
TRAF1-201ENST00000373887 DHX37Q8IY37 1157 aaKnown RBP17.19■□□□□ 0.34
TRAF1-201ENST00000373887 SURF6O75683 361 aaKnown RBP17.18■□□□□ 0.34
TRAF1-201ENST00000373887 EXOSC9Q06265 439 aaKnown RBP17.18■□□□□ 0.34
TRAF1-201ENST00000373887 SAFBQ15424 915 aaKnown RBP eCLIP17.18■□□□□ 0.34
TRAF1-201ENST00000373887 OLFM4Q6UX06 510 aa17.18■□□□□ 0.34
TRAF1-201ENST00000373887 FSD1Q9BTV5 496 aa17.18■□□□□ 0.34
TRAF1-201ENST00000373887 CDCA7LQ96GN5 454 aa17.18■□□□□ 0.34
TRAF1-201ENST00000373887 RALYLQ86SE5 291 aaKnown RBP17.17■□□□□ 0.34
TRAF1-201ENST00000373887 CCDC85AQ96PX6 553 aaPredicted RBP17.17■□□□□ 0.34
TRAF1-201ENST00000373887 ATP2B2Q01814 1243 aa17.17■□□□□ 0.34
TRAF1-201ENST00000373887 RNF214Q8ND24 703 aa17.17■□□□□ 0.34
TRAF1-201ENST00000373887 SPINK5Q9NQ38 1064 aaPredicted RBP17.17■□□□□ 0.34
TRAF1-201ENST00000373887 SPG7Q9UQ90 795 aa17.17■□□□□ 0.34
TRAF1-201ENST00000373887 HSP90AB4PQ58FF6 505 aa17.17■□□□□ 0.34
TRAF1-201ENST00000373887 RBM5P52756 815 aaKnown RBP eCLIP17.16■□□□□ 0.34
TRAF1-201ENST00000373887 TWISTNBQ3B726 338 aaPredicted RBP17.16■□□□□ 0.34
TRAF1-201ENST00000373887 WASHC2AQ641Q2 1341 aa17.16■□□□□ 0.34
TRAF1-201ENST00000373887 SLC4A2P04920 1241 aa17.16■□□□□ 0.34
TRAF1-201ENST00000373887 CCDC173Q0VFZ6 552 aa17.16■□□□□ 0.34
TRAF1-201ENST00000373887 STAC3Q96MF2 364 aa17.16■□□□□ 0.34
TRAF1-201ENST00000373887 HDGFL1Q5TGJ6 251 aa17.15■□□□□ 0.34
TRAF1-201ENST00000373887 DCTN1Q14203 1278 aa17.15■□□□□ 0.34
TRAF1-201ENST00000373887 RDXP35241 583 aaKnown RBP17.15■□□□□ 0.34
TRAF1-201ENST00000373887 HECW1Q76N89 1606 aa17.15■□□□□ 0.34
TRAF1-201ENST00000373887 TTC39AQ5SRH9 613 aa17.15■□□□□ 0.34
TRAF1-201ENST00000373887 SLC52A1Q9NWF4 448 aa17.15■□□□□ 0.34
TRAF1-201ENST00000373887 ARHGEF11O15085 1522 aa17.15■□□□□ 0.34
TRAF1-201ENST00000373887 MAP4K4O95819 1239 aaPredicted RBP17.15■□□□□ 0.34
TRAF1-201ENST00000373887 INTS3Q68E01 1043 aaKnown RBP17.14■□□□□ 0.33
TRAF1-201ENST00000373887 CCAR1Q8IX12 1150 aaKnown RBP17.14■□□□□ 0.33
TRAF1-201ENST00000373887 TROQ12816 1431 aaPredicted RBP17.14■□□□□ 0.33
TRAF1-201ENST00000373887 USHBP1Q8N6Y0 703 aa17.14■□□□□ 0.33
TRAF1-201ENST00000373887 EHBP1L1Q8N3D4 1523 aa17.14■□□□□ 0.33
TRAF1-201ENST00000373887 TMEM132AQ24JP5 1023 aa17.13■□□□□ 0.33
TRAF1-201ENST00000373887 FBXO31Q5XUX0 539 aaPredicted RBP17.13■□□□□ 0.33
TRAF1-201ENST00000373887 PAF1Q8N7H5 531 aa17.13■□□□□ 0.33
TRAF1-201ENST00000373887 TBC1D2BQ9UPU7 963 aa17.13■□□□□ 0.33
TRAF1-201ENST00000373887 CD109Q6YHK3 1445 aa17.13■□□□□ 0.33
TRAF1-201ENST00000373887 SMC2O95347 1197 aa17.13■□□□□ 0.33
TRAF1-201ENST00000373887 ZNF692Q9BU19 519 aaPredicted RBP17.13■□□□□ 0.33
TRAF1-201ENST00000373887 MIS18AQ9NYP9 233 aa17.13■□□□□ 0.33
TRAF1-201ENST00000373887 BRPF1P55201 1214 aaPredicted RBP17.12■□□□□ 0.33
TRAF1-201ENST00000373887 NOB1Q9ULX3 412 aaKnown RBP17.12■□□□□ 0.33
TRAF1-201ENST00000373887 TSPYL1Q9H0U9 437 aa17.12■□□□□ 0.33
TRAF1-201ENST00000373887 PLEKHH2Q8IVE3 1493 aa17.12■□□□□ 0.33
TRAF1-201ENST00000373887 BTBD11A6QL63 1104 aa17.12■□□□□ 0.33
TRAF1-201ENST00000373887 CCDC39Q9UFE4 941 aa17.12■□□□□ 0.33
TRAF1-201ENST00000373887 NBPF8Q3BBV2 869 aa17.11■□□□□ 0.33
TRAF1-201ENST00000373887 HSP90AB3PQ58FF7 597 aa17.11■□□□□ 0.33
TRAF1-201ENST00000373887 NUCB2P80303 420 aa17.11■□□□□ 0.33
TRAF1-201ENST00000373887 NAT10Q9H0A0 1025 aaKnown RBP17.11■□□□□ 0.33
TRAF1-201ENST00000373887 BRMS1Q9HCU9 246 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms