RNA–Protein interactions for RNA: ENST00000373115.4

CHST3-201, Transcript of carbohydrate sulfotransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHST3, Length 6,970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHST3-201ENST00000373115 PAF1Q8N7H5 531 aa18.6■□□□□ 0.57
CHST3-201ENST00000373115 KRT18P05783 430 aaKnown RBP18.6■□□□□ 0.57
CHST3-201ENST00000373115 RSPH4AQ5TD94 716 aa18.6■□□□□ 0.57
CHST3-201ENST00000373115 MAPK8IP2Q13387 824 aaPredicted RBP18.6■□□□□ 0.57
CHST3-201ENST00000373115 SURF6O75683 361 aaKnown RBP18.59■□□□□ 0.57
CHST3-201ENST00000373115 SEPT7Q16181 437 aaKnown RBP18.59■□□□□ 0.57
CHST3-201ENST00000373115 GOLGA6L10A6NI86 522 aa18.59■□□□□ 0.57
CHST3-201ENST00000373115 SART3Q15020 963 aaKnown RBP18.59■□□□□ 0.57
CHST3-201ENST00000373115 GGNBP2Q9H3C7 697 aa18.59■□□□□ 0.57
CHST3-201ENST00000373115 STK38Q15208 465 aa18.58■□□□□ 0.57
CHST3-201ENST00000373115 CCAR1Q8IX12 1150 aaKnown RBP18.58■□□□□ 0.57
CHST3-201ENST00000373115 MBD3O95983 291 aa18.58■□□□□ 0.56
CHST3-201ENST00000373115 UQCRHLA0A096LP55 91 aa18.58■□□□□ 0.56
CHST3-201ENST00000373115 UQCRHP07919 91 aa18.58■□□□□ 0.56
CHST3-201ENST00000373115 ZNF396Q96N95 335 aaPredicted RBP18.58■□□□□ 0.56
CHST3-201ENST00000373115 PDZRN3Q9UPQ7 1066 aa18.58■□□□□ 0.56
CHST3-201ENST00000373115 KIAA0754O94854 1291 aa18.58■□□□□ 0.56
CHST3-201ENST00000373115 ERLIN2O94905 339 aa18.57■□□□□ 0.56
CHST3-201ENST00000373115 CCDC181Q5TID7 509 aa18.57■□□□□ 0.56
CHST3-201ENST00000373115 TXLNAP40222 546 aa18.57■□□□□ 0.56
CHST3-201ENST00000373115 DEF6Q9H4E7 631 aa18.57■□□□□ 0.56
CHST3-201ENST00000373115 ZHX3Q9H4I2 956 aa18.57■□□□□ 0.56
CHST3-201ENST00000373115 TAX1BP1Q86VP1 789 aa18.56■□□□□ 0.56
CHST3-201ENST00000373115 CDCA7LQ96GN5 454 aa18.56■□□□□ 0.56
CHST3-201ENST00000373115 TBC1D2BQ9UPU7 963 aa18.56■□□□□ 0.56
CHST3-201ENST00000373115 ERICH4A6NGS2 130 aa18.56■□□□□ 0.56
CHST3-201ENST00000373115 TNMDQ9H2S6 317 aa18.56■□□□□ 0.56
CHST3-201ENST00000373115 CLASRPQ8N2M8 674 aaKnown RBP18.56■□□□□ 0.56
CHST3-201ENST00000373115 RAPGEF4Q8WZA2 1011 aa18.56■□□□□ 0.56
CHST3-201ENST00000373115 CABP2Q9NPB3 220 aa18.56■□□□□ 0.56
CHST3-201ENST00000373115 TANGO6Q9C0B7 1094 aa18.56■□□□□ 0.56
CHST3-201ENST00000373115 ZNHIT6Q9NWK9 470 aaKnown RBP18.56■□□□□ 0.56
CHST3-201ENST00000373115 PPFIBP1Q86W92 1011 aa18.55■□□□□ 0.56
CHST3-201ENST00000373115 ATP2B2Q01814 1243 aa18.54■□□□□ 0.56
CHST3-201ENST00000373115 ZRSR2Q15696 482 aaKnown RBP18.54■□□□□ 0.56
CHST3-201ENST00000373115 TTC39AQ5SRH9 613 aa18.54■□□□□ 0.56
CHST3-201ENST00000373115 ADAMTS8Q9UP79 889 aa18.54■□□□□ 0.56
CHST3-201ENST00000373115 HMGN5P82970 282 aaKnown RBP18.53■□□□□ 0.56
CHST3-201ENST00000373115 CCDC192P0DO97 292 aa18.53■□□□□ 0.56
CHST3-201ENST00000373115 KIF7Q2M1P5 1343 aa18.53■□□□□ 0.56
CHST3-201ENST00000373115 ME1P48163 572 aa18.52■□□□□ 0.56
CHST3-201ENST00000373115 WWC2Q6AWC2 1192 aa18.52■□□□□ 0.56
CHST3-201ENST00000373115 CCDC112Q8NEF3 446 aa18.52■□□□□ 0.56
CHST3-201ENST00000373115 NOB1Q9ULX3 412 aaKnown RBP18.52■□□□□ 0.56
CHST3-201ENST00000373115 PDCL3Q9H2J4 239 aa18.52■□□□□ 0.55
CHST3-201ENST00000373115 NLRP2Q9NX02 1062 aa18.52■□□□□ 0.55
CHST3-201ENST00000373115 GRPEL1Q9HAV7 217 aa18.51■□□□□ 0.55
CHST3-201ENST00000373115 RAPGEF2Q9Y4G8 1499 aa18.51■□□□□ 0.55
CHST3-201ENST00000373115 PDCP20941 246 aa18.51■□□□□ 0.55
CHST3-201ENST00000373115 RABEP1Q15276 862 aa18.51■□□□□ 0.55
CHST3-201ENST00000373115 SEPT11Q9NVA2 429 aaKnown RBP18.51■□□□□ 0.55
CHST3-201ENST00000373115 CCDC30Q5VVM6 783 aa18.5■□□□□ 0.55
CHST3-201ENST00000373115 CCDC7Q96M83 1385 aa18.5■□□□□ 0.55
CHST3-201ENST00000373115 SIL1Q9H173 461 aa18.5■□□□□ 0.55
CHST3-201ENST00000373115 PHF23Q9BUL5 403 aaPredicted RBP18.49■□□□□ 0.55
CHST3-201ENST00000373115 SLC3A2P08195 630 aaKnown RBP18.49■□□□□ 0.55
CHST3-201ENST00000373115 MCM2P49736 904 aa18.49■□□□□ 0.55
CHST3-201ENST00000373115 LRRFIP2Q9Y608 721 aaKnown RBP18.49■□□□□ 0.55
CHST3-201ENST00000373115 HIP1O00291 1037 aa18.48■□□□□ 0.55
CHST3-201ENST00000373115 EXOSC9Q06265 439 aaKnown RBP18.48■□□□□ 0.55
CHST3-201ENST00000373115 KIF6Q6ZMV9 814 aa18.48■□□□□ 0.55
CHST3-201ENST00000373115 CNNM1Q9NRU3 951 aa18.48■□□□□ 0.55
CHST3-201ENST00000373115 CYP46A1Q9Y6A2 500 aa18.48■□□□□ 0.55
CHST3-201ENST00000373115 MTHFSP49914 203 aa18.48■□□□□ 0.55
CHST3-201ENST00000373115 CNTLNQ9NXG0 1405 aa18.47■□□□□ 0.55
CHST3-201ENST00000373115 NUP133Q8WUM0 1156 aa18.47■□□□□ 0.55
CHST3-201ENST00000373115 CCDC102AQ96A19 550 aa18.47■□□□□ 0.55
CHST3-201ENST00000373115 GNAI3P08754 354 aa18.46■□□□□ 0.55
CHST3-201ENST00000373115 GOLGA6L7A0A1B0GV03 622 aa18.46■□□□□ 0.55
CHST3-201ENST00000373115 CCDC69A6NI79 296 aa18.46■□□□□ 0.55
CHST3-201ENST00000373115 PIP4K2AP48426 406 aaPredicted RBP18.46■□□□□ 0.55
CHST3-201ENST00000373115 EIF3JO75822 258 aaKnown RBP18.46■□□□□ 0.55
CHST3-201ENST00000373115 K7ELQ4 463 aaPredicted RBP18.46■□□□□ 0.55
CHST3-201ENST00000373115 GNAI2P04899 355 aa18.46■□□□□ 0.55
CHST3-201ENST00000373115 BCAR3O75815 825 aa18.46■□□□□ 0.54
CHST3-201ENST00000373115 STIM1Q13586 685 aa18.46■□□□□ 0.54
CHST3-201ENST00000373115 ANKRD18AQ8IVF6 992 aa18.46■□□□□ 0.54
CHST3-201ENST00000373115 PRDM2Q13029 1718 aa18.45■□□□□ 0.54
CHST3-201ENST00000373115 TAF3Q5VWG9 929 aa18.45■□□□□ 0.54
CHST3-201ENST00000373115 DACH1Q9UI36 760 aa18.45■□□□□ 0.54
CHST3-201ENST00000373115 TSR2Q969E8 191 aaKnown RBP18.45■□□□□ 0.54
CHST3-201ENST00000373115 AAMPQ13685 434 aa18.45■□□□□ 0.54
CHST3-201ENST00000373115 RBM42Q9BTD8 480 aaKnown RBP18.45■□□□□ 0.54
CHST3-201ENST00000373115 CCDC158Q5M9N0 1113 aa18.45■□□□□ 0.54
CHST3-201ENST00000373115 TMEM132EQ6IEE7 984 aa18.45■□□□□ 0.54
CHST3-201ENST00000373115 TCP11L2Q8N4U5 519 aa18.45■□□□□ 0.54
CHST3-201ENST00000373115 ERLIN1O75477 346 aa18.44■□□□□ 0.54
CHST3-201ENST00000373115 LRRCC1Q9C099 1032 aa18.44■□□□□ 0.54
CHST3-201ENST00000373115 LARP1BQ659C4 914 aaKnown RBP18.44■□□□□ 0.54
CHST3-201ENST00000373115 AEBP1Q8IUX7 1158 aa18.44■□□□□ 0.54
CHST3-201ENST00000373115 JMYQ8N9B5 988 aa18.44■□□□□ 0.54
CHST3-201ENST00000373115 IBSPP21815 317 aaPredicted RBP18.43■□□□□ 0.54
CHST3-201ENST00000373115 PIBF1Q8WXW3 757 aa18.43■□□□□ 0.54
CHST3-201ENST00000373115 JPH4Q96JJ6 628 aa18.43■□□□□ 0.54
CHST3-201ENST00000373115 TWISTNBQ3B726 338 aaPredicted RBP18.43■□□□□ 0.54
CHST3-201ENST00000373115 LUC7LQ9NQ29 371 aaKnown RBP18.43■□□□□ 0.54
CHST3-201ENST00000373115 PRDM10Q9NQV6 1147 aa18.43■□□□□ 0.54
CHST3-201ENST00000373115 MROH2BQ7Z745 1585 aa18.43■□□□□ 0.54
CHST3-201ENST00000373115 WDR33Q9C0J8 1336 aaKnown RBP18.42■□□□□ 0.54
CHST3-201ENST00000373115 PDS5BQ9NTI5 1447 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms