RNA–Protein interactions for RNA: ENST00000371648.4

EDF1-202, Transcript of endothelial differentiation related factor 1, humanhuman

TSL 1 (best) BASIC

Gene EDF1, Length 809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1-202ENST00000371648 ABCA3Q99758 1704 aa20.6■□□□□ 0.89
EDF1-202ENST00000371648 PLCH1Q4KWH8 1693 aa20.59■□□□□ 0.89
EDF1-202ENST00000371648 ONECUT3O60422 494 aaPredicted RBP20.59■□□□□ 0.89
EDF1-202ENST00000371648 ARHGEF28Q8N1W1 1705 aaKnown RBP20.58■□□□□ 0.89
EDF1-202ENST00000371648 A0A0G2JS52 829 aa20.58■□□□□ 0.89
EDF1-202ENST00000371648 MYT1Q01538 1121 aa20.58■□□□□ 0.89
EDF1-202ENST00000371648 NBPF8Q3BBV2 869 aa20.58■□□□□ 0.89
EDF1-202ENST00000371648 ZRANB1Q9UGI0 708 aa20.58■□□□□ 0.89
EDF1-202ENST00000371648 ATP7BP35670 1465 aa20.57■□□□□ 0.88
EDF1-202ENST00000371648 NWD2Q9ULI1 1742 aa20.57■□□□□ 0.88
EDF1-202ENST00000371648 ALS2Q96Q42 1657 aa20.57■□□□□ 0.88
EDF1-202ENST00000371648 ROCK2O75116 1388 aaKnown RBP20.57■□□□□ 0.88
EDF1-202ENST00000371648 FAM98CQ17RN3 349 aaKnown RBP20.56■□□□□ 0.88
EDF1-202ENST00000371648 KRT27Q7Z3Y8 459 aa20.56■□□□□ 0.88
EDF1-202ENST00000371648 NUTM2GQ5VZR2 741 aa20.55■□□□□ 0.88
EDF1-202ENST00000371648 PRDM11Q9NQV5 511 aa20.55■□□□□ 0.88
EDF1-202ENST00000371648 CCDC61Q9Y6R9 512 aa20.55■□□□□ 0.88
EDF1-202ENST00000371648 CLSPNQ9HAW4 1339 aa20.54■□□□□ 0.88
EDF1-202ENST00000371648 BLMP54132 1417 aaPredicted RBP20.54■□□□□ 0.88
EDF1-202ENST00000371648 DEFB132Q7Z7B7 95 aa20.54■□□□□ 0.88
EDF1-202ENST00000371648 ACEP12821 1306 aa20.53■□□□□ 0.88
EDF1-202ENST00000371648 TRPM1Q7Z4N2 1603 aa20.53■□□□□ 0.88
EDF1-202ENST00000371648 BRWD3Q6RI45 1802 aa20.53■□□□□ 0.88
EDF1-202ENST00000371648 SF3B2Q13435 895 aaKnown RBP20.53■□□□□ 0.88
EDF1-202ENST00000371648 CARD11Q9BXL7 1154 aa20.52■□□□□ 0.88
EDF1-202ENST00000371648 CENPJQ9HC77 1338 aaPredicted RBP20.52■□□□□ 0.87
EDF1-202ENST00000371648 PLEKHG3A1L390 1219 aa20.51■□□□□ 0.87
EDF1-202ENST00000371648 CHRNA2Q15822 529 aa20.51■□□□□ 0.87
EDF1-202ENST00000371648 SRCAPQ6ZRS2 3230 aa20.51■□□□□ 0.87
EDF1-202ENST00000371648 POLR3AO14802 1390 aaPredicted RBP20.5■□□□□ 0.87
EDF1-202ENST00000371648 KIAA0232Q92628 1395 aa20.5■□□□□ 0.87
EDF1-202ENST00000371648 COL14A1Q05707 1796 aaKnown RBP20.5■□□□□ 0.87
EDF1-202ENST00000371648 ZC3H6P61129 1189 aaKnown RBP20.5■□□□□ 0.87
EDF1-202ENST00000371648 SRPK2P78362 688 aaKnown RBP20.5■□□□□ 0.87
EDF1-202ENST00000371648 SPATA31A5Q5VU36 1347 aa20.5■□□□□ 0.87
EDF1-202ENST00000371648 SPATA31A7Q8IWB4 1347 aa20.5■□□□□ 0.87
EDF1-202ENST00000371648 ITSN1Q15811 1721 aa20.5■□□□□ 0.87
EDF1-202ENST00000371648 NRAPQ86VF7 1730 aa20.5■□□□□ 0.87
EDF1-202ENST00000371648 CABP2Q9NPB3 220 aa20.49■□□□□ 0.87
EDF1-202ENST00000371648 ABTB2Q8N961 1025 aa20.48■□□□□ 0.87
EDF1-202ENST00000371648 TIMELESSQ9UNS1 1208 aa20.48■□□□□ 0.87
EDF1-202ENST00000371648 STRN4Q9NRL3 753 aa20.47■□□□□ 0.87
EDF1-202ENST00000371648 FAM182BQ5T319 152 aa20.46■□□□□ 0.87
EDF1-202ENST00000371648 CRYBG1Q9Y4K1 1723 aa20.46■□□□□ 0.87
EDF1-202ENST00000371648 PPIP5K1Q6PFW1 1433 aa20.44■□□□□ 0.86
EDF1-202ENST00000371648 TOPAZ1Q8N9V7 1692 aa20.43■□□□□ 0.86
EDF1-202ENST00000371648 EVA1CP58658 441 aa20.43■□□□□ 0.86
EDF1-202ENST00000371648 SPATA31A1Q5TZJ5 1347 aa20.43■□□□□ 0.86
EDF1-202ENST00000371648 CABP1Q9NZU7 370 aa20.42■□□□□ 0.86
EDF1-202ENST00000371648 USP35Q9P2H5 1018 aa20.42■□□□□ 0.86
EDF1-202ENST00000371648 QRICH2Q9H0J4 1663 aa20.42■□□□□ 0.86
EDF1-202ENST00000371648 BAG6P46379 1132 aa20.41■□□□□ 0.86
EDF1-202ENST00000371648 EVC2Q86UK5 1308 aa20.4■□□□□ 0.86
EDF1-202ENST00000371648 NLRP13Q86W25 1043 aa20.4■□□□□ 0.86
EDF1-202ENST00000371648 PHRF1Q9P1Y6 1649 aaKnown RBP20.4■□□□□ 0.86
EDF1-202ENST00000371648 USP19O94966 1318 aa20.38■□□□□ 0.85
EDF1-202ENST00000371648 GCP02774 474 aa20.38■□□□□ 0.85
EDF1-202ENST00000371648 EN1Q05925 392 aaPredicted RBP20.37■□□□□ 0.85
EDF1-202ENST00000371648 LARP1Q6PKG0 1096 aaKnown RBP20.37■□□□□ 0.85
EDF1-202ENST00000371648 SSH2Q76I76 1423 aa20.36■□□□□ 0.85
EDF1-202ENST00000371648 CPDO75976 1380 aa20.35■□□□□ 0.85
EDF1-202ENST00000371648 ZBTB7CA1YPR0 619 aa20.35■□□□□ 0.85
EDF1-202ENST00000371648 NLRP6P59044 892 aa20.35■□□□□ 0.85
EDF1-202ENST00000371648 THSD7AQ9UPZ6 1657 aa20.35■□□□□ 0.85
EDF1-202ENST00000371648 NRKQ7Z2Y5 1582 aa20.34■□□□□ 0.85
EDF1-202ENST00000371648 PSDA5PKW4 1024 aaPredicted RBP20.34■□□□□ 0.85
EDF1-202ENST00000371648 CAMTA1Q9Y6Y1 1673 aa20.34■□□□□ 0.85
EDF1-202ENST00000371648 FAM196AQ6ZSG2 479 aa20.33■□□□□ 0.85
EDF1-202ENST00000371648 BARGINQ6ZT62 677 aa20.33■□□□□ 0.85
EDF1-202ENST00000371648 USP6P35125 1406 aa20.33■□□□□ 0.84
EDF1-202ENST00000371648 BRD4O60885 1362 aaPredicted RBP20.33■□□□□ 0.84
EDF1-202ENST00000371648 ST20-MTHFSA0A0A6YYL1 179 aa20.32■□□□□ 0.84
EDF1-202ENST00000371648 TRIM37O94972 964 aa20.32■□□□□ 0.84
EDF1-202ENST00000371648 PDE3BQ13370 1112 aa20.32■□□□□ 0.84
EDF1-202ENST00000371648 TCP11L2Q8N4U5 519 aa20.32■□□□□ 0.84
EDF1-202ENST00000371648 EZH2Q15910 746 aaKnown RBP20.29■□□□□ 0.84
EDF1-202ENST00000371648 SLC24A1O60721 1099 aa20.28■□□□□ 0.84
EDF1-202ENST00000371648 LMO7Q8WWI1 1683 aa20.28■□□□□ 0.84
EDF1-202ENST00000371648 RGPD1P0DJD0 1748 aa20.27■□□□□ 0.84
EDF1-202ENST00000371648 APBA3O96018 575 aa20.27■□□□□ 0.84
EDF1-202ENST00000371648 ZNF692Q9BU19 519 aaPredicted RBP20.27■□□□□ 0.84
EDF1-202ENST00000371648 THRAP3Q9Y2W1 955 aaKnown RBP20.27■□□□□ 0.84
EDF1-202ENST00000371648 COL5A2P05997 1499 aaPredicted RBP20.26■□□□□ 0.83
EDF1-202ENST00000371648 USP47Q96K76 1375 aa20.26■□□□□ 0.83
EDF1-202ENST00000371648 TMC1Q8TDI8 760 aa20.26■□□□□ 0.83
EDF1-202ENST00000371648 TTC21BQ7Z4L5 1316 aa20.26■□□□□ 0.83
EDF1-202ENST00000371648 AATKQ6ZMQ8 1374 aa20.25■□□□□ 0.83
EDF1-202ENST00000371648 SBNO2Q9Y2G9 1366 aa20.25■□□□□ 0.83
EDF1-202ENST00000371648 SOX12O15370 315 aa20.25■□□□□ 0.83
EDF1-202ENST00000371648 R3HDM1Q15032 1099 aaKnown RBP20.25■□□□□ 0.83
EDF1-202ENST00000371648 DISP2A7MBM2 1401 aa20.25■□□□□ 0.83
EDF1-202ENST00000371648 CAMKK2Q96RR4 588 aa20.24■□□□□ 0.83
EDF1-202ENST00000371648 TOM1L2Q6ZVM7 507 aa20.23■□□□□ 0.83
EDF1-202ENST00000371648 AXIN2Q9Y2T1 843 aa20.23■□□□□ 0.83
EDF1-202ENST00000371648 SLIT3O75094 1523 aa20.22■□□□□ 0.83
EDF1-202ENST00000371648 CRB1P82279 1406 aa20.22■□□□□ 0.83
EDF1-202ENST00000371648 TESK2Q96S53 571 aa20.22■□□□□ 0.83
EDF1-202ENST00000371648 TNS1Q9HBL0 1735 aaKnown RBP20.22■□□□□ 0.83
EDF1-202ENST00000371648 TMF1P82094 1093 aa20.21■□□□□ 0.83
EDF1-202ENST00000371648 PIK3C2AO00443 1686 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms