RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 QSER1Q2KHR3 1735 aa6.98□□□□□ -1.29
UBE3D-202ENST00000369746 NRAPQ86VF7 1730 aa6.98□□□□□ -1.29
UBE3D-202ENST00000369746 GLIPR1L2Q4G1C9 344 aa6.97□□□□□ -1.29
UBE3D-202ENST00000369746 USP32Q8NFA0 1604 aa6.97□□□□□ -1.29
UBE3D-202ENST00000369746 HFM1A2PYH4 1435 aa6.97□□□□□ -1.29
UBE3D-202ENST00000369746 CASZ1Q86V15 1759 aa6.97□□□□□ -1.29
UBE3D-202ENST00000369746 ATF3P18847 181 aa6.97□□□□□ -1.29
UBE3D-202ENST00000369746 BBXQ8WY36 941 aaPredicted RBP6.97□□□□□ -1.29
UBE3D-202ENST00000369746 BCL9O00512 1426 aa6.97□□□□□ -1.29
UBE3D-202ENST00000369746 RIMS2Q9UQ26 1411 aa6.97□□□□□ -1.29
UBE3D-202ENST00000369746 NRXN3Q9Y4C0 1643 aa6.96□□□□□ -1.29
UBE3D-202ENST00000369746 BRWD3Q6RI45 1802 aa6.96□□□□□ -1.29
UBE3D-202ENST00000369746 KIF3BO15066 747 aa6.96□□□□□ -1.29
UBE3D-202ENST00000369746 CHD4Q14839 1912 aa6.96□□□□□ -1.3
UBE3D-202ENST00000369746 NUP188Q5SRE5 1749 aa6.96□□□□□ -1.3
UBE3D-202ENST00000369746 BAG6P46379 1132 aa6.96□□□□□ -1.3
UBE3D-202ENST00000369746 SF3B2Q13435 895 aaKnown RBP6.96□□□□□ -1.3
UBE3D-202ENST00000369746 BRINP3Q76B58 766 aa6.96□□□□□ -1.3
UBE3D-202ENST00000369746 NAP1L2Q9ULW6 460 aaPredicted RBP6.96□□□□□ -1.3
UBE3D-202ENST00000369746 KDM4AO75164 1064 aa6.95□□□□□ -1.3
UBE3D-202ENST00000369746 FBXO31Q5XUX0 539 aaPredicted RBP6.95□□□□□ -1.3
UBE3D-202ENST00000369746 P3H3Q8IVL6 736 aa6.95□□□□□ -1.3
UBE3D-202ENST00000369746 COL14A1Q05707 1796 aaKnown RBP6.95□□□□□ -1.3
UBE3D-202ENST00000369746 PXDNQ92626 1479 aa6.95□□□□□ -1.3
UBE3D-202ENST00000369746 SLC34A2O95436 690 aa6.95□□□□□ -1.3
UBE3D-202ENST00000369746 FOXD4L1Q9NU39 408 aa6.95□□□□□ -1.3
UBE3D-202ENST00000369746 FANCIQ9NVI1 1328 aa6.95□□□□□ -1.3
UBE3D-202ENST00000369746 ABCA3Q99758 1704 aa6.94□□□□□ -1.3
UBE3D-202ENST00000369746 C1orf167Q5SNV9 1468 aa6.94□□□□□ -1.3
UBE3D-202ENST00000369746 DLC1Q96QB1 1528 aa6.94□□□□□ -1.3
UBE3D-202ENST00000369746 TSPY4P0CV99 314 aa6.94□□□□□ -1.3
UBE3D-202ENST00000369746 TSPY10P0CW01 314 aa6.94□□□□□ -1.3
UBE3D-202ENST00000369746 PLCH1Q4KWH8 1693 aa6.94□□□□□ -1.3
UBE3D-202ENST00000369746 HMGB2P26583 209 aaKnown RBP6.93□□□□□ -1.3
UBE3D-202ENST00000369746 HNRNPMP52272 730 aaKnown RBP eCLIP6.93□□□□□ -1.3
UBE3D-202ENST00000369746 TRIM52Q96A61 297 aa6.93□□□□□ -1.3
UBE3D-202ENST00000369746 APBB1O00213 710 aa6.93□□□□□ -1.3
UBE3D-202ENST00000369746 YY1P25490 414 aa6.93□□□□□ -1.3
UBE3D-202ENST00000369746 VPS72Q15906 364 aa6.93□□□□□ -1.3
UBE3D-202ENST00000369746 AEBP1Q8IUX7 1158 aa6.93□□□□□ -1.3
UBE3D-202ENST00000369746 SECISBP2LQ93073 1101 aaKnown RBP6.93□□□□□ -1.3
UBE3D-202ENST00000369746 SUPT16HQ9Y5B9 1047 aaKnown RBP6.93□□□□□ -1.3
UBE3D-202ENST00000369746 FAM43BQ6ZT52 329 aaPredicted RBP6.92□□□□□ -1.3
UBE3D-202ENST00000369746 TEX2Q8IWB9 1127 aa6.92□□□□□ -1.3
UBE3D-202ENST00000369746 WWC1Q8IX03 1113 aa6.92□□□□□ -1.3
UBE3D-202ENST00000369746 SBNO1A3KN83 1393 aa6.92□□□□□ -1.3
UBE3D-202ENST00000369746 TECPR2O15040 1411 aa6.92□□□□□ -1.3
UBE3D-202ENST00000369746 GJD4Q96KN9 370 aaPredicted RBP6.92□□□□□ -1.3
UBE3D-202ENST00000369746 NEUROD2Q15784 382 aa6.92□□□□□ -1.3
UBE3D-202ENST00000369746 CCDC27Q2M243 656 aa6.92□□□□□ -1.3
UBE3D-202ENST00000369746 KCNG1Q9UIX4 513 aa6.92□□□□□ -1.3
UBE3D-202ENST00000369746 SIRT1Q96EB6 747 aa6.91□□□□□ -1.3
UBE3D-202ENST00000369746 USP21Q9UK80 565 aa6.91□□□□□ -1.3
UBE3D-202ENST00000369746 CCDC144AA2RUR9 1427 aa6.9□□□□□ -1.3
UBE3D-202ENST00000369746 NUTM2BA6NNL0 878 aaPredicted RBP6.9□□□□□ -1.3
UBE3D-202ENST00000369746 NUTM2EB1AL46 878 aaPredicted RBP6.9□□□□□ -1.3
UBE3D-202ENST00000369746 NUTM2DQ5VT03 806 aaPredicted RBP6.9□□□□□ -1.3
UBE3D-202ENST00000369746 NUTM2AQ8IVF1 878 aaPredicted RBP6.9□□□□□ -1.3
UBE3D-202ENST00000369746 PLCD4Q9BRC7 762 aa6.9□□□□□ -1.3
UBE3D-202ENST00000369746 C1QTNF8P60827 252 aa6.89□□□□□ -1.31
UBE3D-202ENST00000369746 CC2D2BQ6DHV5 1058 aa6.89□□□□□ -1.31
UBE3D-202ENST00000369746 UNC5CLQ8IV45 518 aa6.89□□□□□ -1.31
UBE3D-202ENST00000369746 NPHP3Q7Z494 1330 aa6.89□□□□□ -1.31
UBE3D-202ENST00000369746 SPRYD3Q8NCJ5 442 aa6.89□□□□□ -1.31
UBE3D-202ENST00000369746 CHMP4BQ9H444 224 aaKnown RBP6.89□□□□□ -1.31
UBE3D-202ENST00000369746 FMN2Q9NZ56 1722 aa6.88□□□□□ -1.31
UBE3D-202ENST00000369746 CAMTA1Q9Y6Y1 1673 aa6.88□□□□□ -1.31
UBE3D-202ENST00000369746 PPP4R3CPQ6ZMV5 832 aa6.88□□□□□ -1.31
UBE3D-202ENST00000369746 ARHGEF10O15013 1369 aa6.87□□□□□ -1.31
UBE3D-202ENST00000369746 BRD4O60885 1362 aaPredicted RBP6.87□□□□□ -1.31
UBE3D-202ENST00000369746 CRYBG1Q9Y4K1 1723 aa6.87□□□□□ -1.31
UBE3D-202ENST00000369746 ABCC6O95255 1503 aa6.87□□□□□ -1.31
UBE3D-202ENST00000369746 TRPM1Q7Z4N2 1603 aa6.87□□□□□ -1.31
UBE3D-202ENST00000369746 MFAP1P55081 439 aaKnown RBP6.87□□□□□ -1.31
UBE3D-202ENST00000369746 PARP4Q9UKK3 1724 aaKnown RBP6.87□□□□□ -1.31
UBE3D-202ENST00000369746 C10orf71Q711Q0 1435 aa6.87□□□□□ -1.31
UBE3D-202ENST00000369746 PTPRUQ92729 1446 aa6.86□□□□□ -1.31
UBE3D-202ENST00000369746 MYO5BQ9ULV0 1848 aa6.86□□□□□ -1.31
UBE3D-202ENST00000369746 ANKRD30AQ9BXX3 1397 aa6.86□□□□□ -1.31
UBE3D-202ENST00000369746 ANKARQ7Z5J8 1434 aa6.86□□□□□ -1.31
UBE3D-202ENST00000369746 RPGRIP1LQ68CZ1 1315 aa6.86□□□□□ -1.31
UBE3D-202ENST00000369746 EIF3AQ14152 1382 aaKnown RBP6.86□□□□□ -1.31
UBE3D-202ENST00000369746 KIF15Q9NS87 1388 aa6.85□□□□□ -1.31
UBE3D-202ENST00000369746 CICQ96RK0 1608 aaPredicted RBP6.85□□□□□ -1.31
UBE3D-202ENST00000369746 CHRM1P11229 460 aaPredicted RBP6.85□□□□□ -1.31
UBE3D-202ENST00000369746 ROCK1Q13464 1354 aa6.84□□□□□ -1.31
UBE3D-202ENST00000369746 IDI1Q13907 227 aa6.84□□□□□ -1.31
UBE3D-202ENST00000369746 NBPF8Q3BBV2 869 aa6.84□□□□□ -1.31
UBE3D-202ENST00000369746 NBPF14Q5TI25 921 aa6.84□□□□□ -1.31
UBE3D-202ENST00000369746 DHX57Q6P158 1386 aaKnown RBP6.84□□□□□ -1.31
UBE3D-202ENST00000369746 CCER1Q8TC90 406 aaPredicted RBP6.84□□□□□ -1.32
UBE3D-202ENST00000369746 RNF216Q9NWF9 866 aaPredicted RBP6.84□□□□□ -1.32
UBE3D-202ENST00000369746 ZNF316A6NFI3 1004 aaPredicted RBP6.83□□□□□ -1.32
UBE3D-202ENST00000369746 TMCO4Q5TGY1 634 aa6.83□□□□□ -1.32
UBE3D-202ENST00000369746 RBM19Q9Y4C8 960 aaKnown RBP6.83□□□□□ -1.32
UBE3D-202ENST00000369746 PEAK1Q9H792 1746 aa6.83□□□□□ -1.32
UBE3D-202ENST00000369746 NRXN1Q9ULB1 1477 aa6.83□□□□□ -1.32
UBE3D-202ENST00000369746 ANAPC15P60006 121 aa6.83□□□□□ -1.32
UBE3D-202ENST00000369746 KRT27Q7Z3Y8 459 aa6.83□□□□□ -1.32
UBE3D-202ENST00000369746 SPON1Q9HCB6 807 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms