RNA–Protein interactions for RNA: ENST00000368905.8

SCNM1-202, Transcript of sodium channel modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCNM1, Length 2,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-202ENST00000368905 TRAPPC8Q9Y2L5 1435 aa12.75□□□□□ -0.37
SCNM1-202ENST00000368905 BCORL1Q5H9F3 1711 aa12.75□□□□□ -0.37
SCNM1-202ENST00000368905 KTN1Q86UP2 1357 aaKnown RBP12.75□□□□□ -0.37
SCNM1-202ENST00000368905 TSPOAP1O95153 1857 aa12.75□□□□□ -0.37
SCNM1-202ENST00000368905 LAMC1P11047 1609 aa12.75□□□□□ -0.37
SCNM1-202ENST00000368905 SOX12O15370 315 aa12.74□□□□□ -0.37
SCNM1-202ENST00000368905 CCDC96Q2M329 555 aa12.74□□□□□ -0.37
SCNM1-202ENST00000368905 HDAC5Q9UQL6 1122 aa12.74□□□□□ -0.37
SCNM1-202ENST00000368905 NBPF20Q3BBV1 942 aa12.74□□□□□ -0.37
SCNM1-202ENST00000368905 GIMAP6Q6P9H5 292 aa12.74□□□□□ -0.37
SCNM1-202ENST00000368905 PLA2R1Q13018 1463 aa12.74□□□□□ -0.37
SCNM1-202ENST00000368905 KANK1Q14678 1352 aa12.73□□□□□ -0.37
SCNM1-202ENST00000368905 ZFYVE27Q5T4F4 411 aa12.73□□□□□ -0.37
SCNM1-202ENST00000368905 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.73□□□□□ -0.37
SCNM1-202ENST00000368905 SH3BP1Q9Y3L3 701 aa12.73□□□□□ -0.37
SCNM1-202ENST00000368905 TRPM1Q7Z4N2 1603 aa12.73□□□□□ -0.37
SCNM1-202ENST00000368905 FANCAO15360 1455 aa12.73□□□□□ -0.37
SCNM1-202ENST00000368905 ZFYVE16Q7Z3T8 1539 aa12.73□□□□□ -0.37
SCNM1-202ENST00000368905 GPRASP1Q5JY77 1395 aa12.73□□□□□ -0.37
SCNM1-202ENST00000368905 CFAP74Q9C0B2 1584 aa12.73□□□□□ -0.37
SCNM1-202ENST00000368905 MAGEC2Q9UBF1 373 aaPredicted RBP12.72□□□□□ -0.37
SCNM1-202ENST00000368905 DHX29Q7Z478 1369 aaKnown RBP12.72□□□□□ -0.37
SCNM1-202ENST00000368905 PPRC1Q5VV67 1664 aaKnown RBP12.72□□□□□ -0.37
SCNM1-202ENST00000368905 RBM47A0AV96 593 aaKnown RBP12.72□□□□□ -0.37
SCNM1-202ENST00000368905 ARID4AP29374 1257 aaPredicted RBP12.72□□□□□ -0.37
SCNM1-202ENST00000368905 SMC5Q8IY18 1101 aa12.72□□□□□ -0.37
SCNM1-202ENST00000368905 ANP32BQ92688 251 aaKnown RBP12.72□□□□□ -0.37
SCNM1-202ENST00000368905 AK7Q96M32 723 aa12.72□□□□□ -0.37
SCNM1-202ENST00000368905 PPP1R1BQ9UD71 204 aaPredicted RBP12.72□□□□□ -0.37
SCNM1-202ENST00000368905 ST20-MTHFSA0A0A6YYL1 179 aa12.71□□□□□ -0.37
SCNM1-202ENST00000368905 CREB3O43889 395 aa12.71□□□□□ -0.37
SCNM1-202ENST00000368905 CEP120Q8N960 986 aa12.71□□□□□ -0.37
SCNM1-202ENST00000368905 A2MP01023 1474 aa12.71□□□□□ -0.38
SCNM1-202ENST00000368905 WDR78Q5VTH9 848 aa12.71□□□□□ -0.38
SCNM1-202ENST00000368905 PROSER2Q86WR7 435 aaPredicted RBP12.71□□□□□ -0.38
SCNM1-202ENST00000368905 MRRFQ96E11 262 aaKnown RBP12.71□□□□□ -0.38
SCNM1-202ENST00000368905 FAM117AQ9C073 453 aa12.71□□□□□ -0.38
SCNM1-202ENST00000368905 ATP7AQ04656 1500 aa12.7□□□□□ -0.38
SCNM1-202ENST00000368905 PNMA2Q9UL42 364 aa12.7□□□□□ -0.38
SCNM1-202ENST00000368905 ZBED9Q6R2W3 1325 aa12.7□□□□□ -0.38
SCNM1-202ENST00000368905 DEPDC5O75140 1603 aa12.7□□□□□ -0.38
SCNM1-202ENST00000368905 SH3BP5O60239 455 aa12.69□□□□□ -0.38
SCNM1-202ENST00000368905 TCF3P15923 654 aa12.69□□□□□ -0.38
SCNM1-202ENST00000368905 RGL3Q3MIN7 710 aa12.69□□□□□ -0.38
SCNM1-202ENST00000368905 TRIM44Q96DX7 344 aaPredicted RBP12.69□□□□□ -0.38
SCNM1-202ENST00000368905 INO80Q9ULG1 1556 aaPredicted RBP12.69□□□□□ -0.38
SCNM1-202ENST00000368905 NRDCO43847 1150 aa12.69□□□□□ -0.38
SCNM1-202ENST00000368905 UBXN4Q92575 508 aa12.69□□□□□ -0.38
SCNM1-202ENST00000368905 ADGRL1O94910 1474 aa12.69□□□□□ -0.38
SCNM1-202ENST00000368905 NEO1Q92859 1461 aa12.68□□□□□ -0.38
SCNM1-202ENST00000368905 AFAP1Q8N556 730 aa12.68□□□□□ -0.38
SCNM1-202ENST00000368905 TET3O43151 1660 aa12.68□□□□□ -0.38
SCNM1-202ENST00000368905 TRPM2O94759 1503 aa12.68□□□□□ -0.38
SCNM1-202ENST00000368905 LIG1P18858 919 aa12.67□□□□□ -0.38
SCNM1-202ENST00000368905 SND1Q7KZF4 910 aaKnown RBP eCLIP12.67□□□□□ -0.38
SCNM1-202ENST00000368905 KLHL42Q9P2K6 505 aa12.67□□□□□ -0.38
SCNM1-202ENST00000368905 PRDM15P57071 1507 aaPredicted RBP12.67□□□□□ -0.38
SCNM1-202ENST00000368905 APPP05067 770 aa12.67□□□□□ -0.38
SCNM1-202ENST00000368905 PAX3P23760 479 aa12.67□□□□□ -0.38
SCNM1-202ENST00000368905 STK24Q9Y6E0 443 aa12.67□□□□□ -0.38
SCNM1-202ENST00000368905 SCAPERQ9BY12 1400 aa12.66□□□□□ -0.38
SCNM1-202ENST00000368905 PTPRTO14522 1441 aa12.66□□□□□ -0.38
SCNM1-202ENST00000368905 E9PCH4 1651 aa12.66□□□□□ -0.38
SCNM1-202ENST00000368905 EXOC5O00471 708 aa12.66□□□□□ -0.38
SCNM1-202ENST00000368905 CCDC181Q5TID7 509 aa12.66□□□□□ -0.38
SCNM1-202ENST00000368905 CLEC4GQ6UXB4 293 aa12.66□□□□□ -0.38
SCNM1-202ENST00000368905 C8orf37Q96NL8 207 aa12.66□□□□□ -0.38
SCNM1-202ENST00000368905 SPHKAPQ2M3C7 1700 aa12.65□□□□□ -0.38
SCNM1-202ENST00000368905 WASHC2CQ9Y4E1 1318 aa12.65□□□□□ -0.38
SCNM1-202ENST00000368905 KIF4AO95239 1232 aa12.65□□□□□ -0.38
SCNM1-202ENST00000368905 SSFA2P28290 1259 aa12.65□□□□□ -0.38
SCNM1-202ENST00000368905 CCDC184Q52MB2 194 aa12.65□□□□□ -0.38
SCNM1-202ENST00000368905 CDCA7Q9BWT1 371 aaPredicted RBP12.65□□□□□ -0.38
SCNM1-202ENST00000368905 METTL14Q9HCE5 456 aaKnown RBP12.65□□□□□ -0.38
SCNM1-202ENST00000368905 ATF5Q9Y2D1 282 aaPredicted RBP12.65□□□□□ -0.38
SCNM1-202ENST00000368905 NEURL4Q96JN8 1562 aa12.65□□□□□ -0.39
SCNM1-202ENST00000368905 CEP152O94986 1710 aa12.64□□□□□ -0.39
SCNM1-202ENST00000368905 ARMCX6Q7L4S7 300 aa12.64□□□□□ -0.39
SCNM1-202ENST00000368905 ZNF518AQ6AHZ1 1483 aa12.64□□□□□ -0.39
SCNM1-202ENST00000368905 RRP9O43818 475 aaKnown RBP12.64□□□□□ -0.39
SCNM1-202ENST00000368905 APLP1P51693 650 aa12.64□□□□□ -0.39
SCNM1-202ENST00000368905 CXorf38Q8TB03 319 aa12.64□□□□□ -0.39
SCNM1-202ENST00000368905 TMC1Q8TDI8 760 aa12.64□□□□□ -0.39
SCNM1-202ENST00000368905 TSPAN18Q96SJ8 248 aa12.64□□□□□ -0.39
SCNM1-202ENST00000368905 VWDEQ8N2E2 1590 aa12.64□□□□□ -0.39
SCNM1-202ENST00000368905 BRD4O60885 1362 aaPredicted RBP12.63□□□□□ -0.39
SCNM1-202ENST00000368905 MYBBP1AQ9BQG0 1328 aaKnown RBP12.63□□□□□ -0.39
SCNM1-202ENST00000368905 POLD1P28340 1107 aa12.63□□□□□ -0.39
SCNM1-202ENST00000368905 TMF1P82094 1093 aa12.63□□□□□ -0.39
SCNM1-202ENST00000368905 COL17A1Q9UMD9 1497 aaPredicted RBP12.63□□□□□ -0.39
SCNM1-202ENST00000368905 GOLIM4O00461 696 aa12.62□□□□□ -0.39
SCNM1-202ENST00000368905 MAMSTRQ6ZN01 415 aa12.62□□□□□ -0.39
SCNM1-202ENST00000368905 CACTIN-AS1Q8N1I8 211 aa12.62□□□□□ -0.39
SCNM1-202ENST00000368905 RNF17Q9BXT8 1623 aaKnown RBP12.62□□□□□ -0.39
SCNM1-202ENST00000368905 KIF3BO15066 747 aa12.62□□□□□ -0.39
SCNM1-202ENST00000368905 FNBP4Q8N3X1 1017 aaPredicted RBP12.62□□□□□ -0.39
SCNM1-202ENST00000368905 MAF1Q9H063 256 aa12.62□□□□□ -0.39
SCNM1-202ENST00000368905 IVNS1ABPQ9Y6Y0 642 aa12.62□□□□□ -0.39
SCNM1-202ENST00000368905 IRX3P78415 501 aaPredicted RBP12.61□□□□□ -0.39
SCNM1-202ENST00000368905 ZNF280DQ6N043 979 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms