RNA–Protein interactions for RNA: ENST00000368297.5

LMNA-203, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-203ENST00000368297 FYB1O15117 783 aa21.5■■□□□ 1.03
LMNA-203ENST00000368297 ORAI2Q96SN7 254 aa21.5■■□□□ 1.03
LMNA-203ENST00000368297 KIF1AQ12756 1690 aa21.49■■□□□ 1.03
LMNA-203ENST00000368297 CCDC184Q52MB2 194 aa21.49■■□□□ 1.03
LMNA-203ENST00000368297 NLRP13Q86W25 1043 aa21.49■■□□□ 1.03
LMNA-203ENST00000368297 TTC21BQ7Z4L5 1316 aa21.48■■□□□ 1.03
LMNA-203ENST00000368297 PPP2R1AP30153 589 aa21.48■■□□□ 1.03
LMNA-203ENST00000368297 LTBP4Q8N2S1 1624 aa21.48■■□□□ 1.03
LMNA-203ENST00000368297 TNNT2P45379 298 aaPredicted RBP21.47■■□□□ 1.03
LMNA-203ENST00000368297 NME9Q86XW9 330 aa21.47■■□□□ 1.03
LMNA-203ENST00000368297 BRD4O60885 1362 aaPredicted RBP21.47■■□□□ 1.03
LMNA-203ENST00000368297 PSME1Q06323 249 aa21.45■■□□□ 1.02
LMNA-203ENST00000368297 SSH2Q76I76 1423 aa21.45■■□□□ 1.02
LMNA-203ENST00000368297 TTC21AQ8NDW8 1320 aa21.45■■□□□ 1.02
LMNA-203ENST00000368297 FOXO3O43524 673 aa21.43■■□□□ 1.02
LMNA-203ENST00000368297 PAK3O75914 559 aaPredicted RBP21.43■■□□□ 1.02
LMNA-203ENST00000368297 COG3Q96JB2 828 aa21.43■■□□□ 1.02
LMNA-203ENST00000368297 ZRANB1Q9UGI0 708 aa21.42■■□□□ 1.02
LMNA-203ENST00000368297 SLAIN2Q9P270 581 aa21.4■■□□□ 1.02
LMNA-203ENST00000368297 PIK3C2AO00443 1686 aa21.39■■□□□ 1.01
LMNA-203ENST00000368297 XPCQ01831 940 aaPredicted RBP21.38■■□□□ 1.01
LMNA-203ENST00000368297 FAM9BQ8IZU0 186 aa21.38■■□□□ 1.01
LMNA-203ENST00000368297 KRT28Q7Z3Y7 464 aa21.37■■□□□ 1.01
LMNA-203ENST00000368297 BRINP3Q76B58 766 aa21.36■■□□□ 1.01
LMNA-203ENST00000368297 ABTB2Q8N961 1025 aa21.36■■□□□ 1.01
LMNA-203ENST00000368297 OVOS2A0A0J9YW53 1432 aa21.36■■□□□ 1.01
LMNA-203ENST00000368297 OVOS2Q6IE36 1432 aa21.36■■□□□ 1.01
LMNA-203ENST00000368297 NPHP3Q7Z494 1330 aa21.35■■□□□ 1.01
LMNA-203ENST00000368297 SCAF1Q9H7N4 1312 aaKnown RBP21.35■■□□□ 1.01
LMNA-203ENST00000368297 MTHFSP49914 203 aa21.34■■□□□ 1.01
LMNA-203ENST00000368297 NLRP6P59044 892 aa21.34■■□□□ 1.01
LMNA-203ENST00000368297 NUTM2GQ5VZR2 741 aa21.34■■□□□ 1.01
LMNA-203ENST00000368297 TRPM3Q9HCF6 1732 aaPredicted RBP21.34■■□□□ 1.01
LMNA-203ENST00000368297 USP31Q70CQ4 1352 aa21.34■■□□□ 1.01
LMNA-203ENST00000368297 DDX17Q92841 729 aaKnown RBP21.34■■□□□ 1.01
LMNA-203ENST00000368297 PNISRQ8TF01 805 aaKnown RBP21.33■■□□□ 1
LMNA-203ENST00000368297 CFAP53Q96M91 514 aa21.33■■□□□ 1
LMNA-203ENST00000368297 LMOD2Q6P5Q4 547 aa21.32■■□□□ 1
LMNA-203ENST00000368297 USP54Q70EL1 1684 aa21.31■■□□□ 1
LMNA-203ENST00000368297 MAP2P11137 1827 aaKnown RBP21.31■■□□□ 1
LMNA-203ENST00000368297 SOX12O15370 315 aa21.3■■□□□ 1
LMNA-203ENST00000368297 FBLN1P23142 703 aa21.3■■□□□ 1
LMNA-203ENST00000368297 MARF1Q9Y4F3 1742 aaKnown RBP21.3■■□□□ 1
LMNA-203ENST00000368297 AATKQ6ZMQ8 1374 aa21.3■■□□□ 1
LMNA-203ENST00000368297 PPM1GO15355 546 aaPredicted RBP21.28■■□□□ 1
LMNA-203ENST00000368297 WDR43Q15061 677 aaKnown RBP eCLIP21.28■■□□□ 1
LMNA-203ENST00000368297 PXDNQ92626 1479 aa21.28■■□□□ 1
LMNA-203ENST00000368297 POLKQ9UBT6 870 aa21.28■■□□□ 1
LMNA-203ENST00000368297 SBNO1A3KN83 1393 aa21.27■■□□□ 1
LMNA-203ENST00000368297 ALS2Q96Q42 1657 aa21.26■□□□□ 0.99
LMNA-203ENST00000368297 RRS1Q15050 365 aaKnown RBP21.26■□□□□ 0.99
LMNA-203ENST00000368297 EMILIN1Q9Y6C2 1016 aa21.26■□□□□ 0.99
LMNA-203ENST00000368297 NHSL1Q5SYE7 1610 aa21.26■□□□□ 0.99
LMNA-203ENST00000368297 ROBO1Q9Y6N7 1651 aa21.25■□□□□ 0.99
LMNA-203ENST00000368297 PLEKHG5O94827 1062 aa21.24■□□□□ 0.99
LMNA-203ENST00000368297 TNS3Q68CZ2 1445 aa21.24■□□□□ 0.99
LMNA-203ENST00000368297 SMG6Q86US8 1419 aaKnown RBP21.24■□□□□ 0.99
LMNA-203ENST00000368297 TOM1O60784 492 aa21.23■□□□□ 0.99
LMNA-203ENST00000368297 SHPRHQ149N8 1683 aa21.22■□□□□ 0.99
LMNA-203ENST00000368297 CDK12Q9NYV4 1490 aaPredicted RBP21.22■□□□□ 0.99
LMNA-203ENST00000368297 SOS2Q07890 1332 aaPredicted RBP21.21■□□□□ 0.99
LMNA-203ENST00000368297 SPATA31A3Q5VYP0 1347 aa21.21■□□□□ 0.99
LMNA-203ENST00000368297 HNRNPUQ00839 825 aaKnown RBP eCLIP21.21■□□□□ 0.99
LMNA-203ENST00000368297 KCNH5Q8NCM2 988 aa21.21■□□□□ 0.99
LMNA-203ENST00000368297 COL3A1P02461 1466 aaPredicted RBP21.21■□□□□ 0.99
LMNA-203ENST00000368297 IQSEC2Q5JU85 1478 aa21.21■□□□□ 0.99
LMNA-203ENST00000368297 ARHGEF10O15013 1369 aa21.2■□□□□ 0.98
LMNA-203ENST00000368297 ADAMTS8Q9UP79 889 aa21.2■□□□□ 0.98
LMNA-203ENST00000368297 SLIT3O75094 1523 aa21.19■□□□□ 0.98
LMNA-203ENST00000368297 DIAPH1O60610 1272 aaKnown RBP21.19■□□□□ 0.98
LMNA-203ENST00000368297 NUDCQ9Y266 331 aa21.19■□□□□ 0.98
LMNA-203ENST00000368297 MAP3K19Q56UN5 1328 aa21.19■□□□□ 0.98
LMNA-203ENST00000368297 PNPLA6Q8IY17 1366 aa21.19■□□□□ 0.98
LMNA-203ENST00000368297 UBAP1LF5GYI3 381 aa21.18■□□□□ 0.98
LMNA-203ENST00000368297 USP19O94966 1318 aa21.18■□□□□ 0.98
LMNA-203ENST00000368297 INSRP06213 1382 aa21.18■□□□□ 0.98
LMNA-203ENST00000368297 PEAK1Q9H792 1746 aa21.18■□□□□ 0.98
LMNA-203ENST00000368297 AMPHP49418 695 aa21.18■□□□□ 0.98
LMNA-203ENST00000368297 PIP4K2BP78356 416 aa21.18■□□□□ 0.98
LMNA-203ENST00000368297 CERKQ8TCT0 537 aa21.18■□□□□ 0.98
LMNA-203ENST00000368297 NFAT5O94916 1531 aa21.17■□□□□ 0.98
LMNA-203ENST00000368297 LTN1O94822 1766 aa21.17■□□□□ 0.98
LMNA-203ENST00000368297 ZBTB7CA1YPR0 619 aa21.16■□□□□ 0.98
LMNA-203ENST00000368297 U2SURPO15042 1029 aaKnown RBP21.16■□□□□ 0.98
LMNA-203ENST00000368297 GCP02774 474 aa21.16■□□□□ 0.98
LMNA-203ENST00000368297 MED1Q15648 1581 aaPredicted RBP21.16■□□□□ 0.98
LMNA-203ENST00000368297 AHDC1Q5TGY3 1603 aaPredicted RBP21.16■□□□□ 0.98
LMNA-203ENST00000368297 GTF3C3Q9Y5Q9 886 aa21.15■□□□□ 0.98
LMNA-203ENST00000368297 PHRF1Q9P1Y6 1649 aaKnown RBP21.15■□□□□ 0.98
LMNA-203ENST00000368297 FLT4P35916 1363 aa21.15■□□□□ 0.98
LMNA-203ENST00000368297 BLMP54132 1417 aaPredicted RBP21.14■□□□□ 0.97
LMNA-203ENST00000368297 U2AF1L5P0DN76 240 aaPredicted RBP21.14■□□□□ 0.97
LMNA-203ENST00000368297 U2AF1Q01081 240 aaKnown RBP eCLIP21.14■□□□□ 0.97
LMNA-203ENST00000368297 KIF24Q5T7B8 1368 aa21.13■□□□□ 0.97
LMNA-203ENST00000368297 CABLES1Q8TDN4 633 aa21.12■□□□□ 0.97
LMNA-203ENST00000368297 PHLPP1O60346 1717 aa21.12■□□□□ 0.97
LMNA-203ENST00000368297 HSP90AB2PQ58FF8 381 aa21.12■□□□□ 0.97
LMNA-203ENST00000368297 CRYBG1Q9Y4K1 1723 aa21.12■□□□□ 0.97
LMNA-203ENST00000368297 RTL1A6NKG5 1358 aa21.11■□□□□ 0.97
LMNA-203ENST00000368297 IL13P35225 146 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms