RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 PMFBP1Q8TBY8 1022 aa11.95□□□□□ -0.5
MRPL55-211ENST00000366738 CAMKK2Q96RR4 588 aa11.94□□□□□ -0.5
MRPL55-211ENST00000366738 RREB1Q92766 1687 aa11.94□□□□□ -0.5
MRPL55-211ENST00000366738 ALS2Q96Q42 1657 aa11.94□□□□□ -0.5
MRPL55-211ENST00000366738 ACIN1Q9UKV3 1341 aaKnown RBP11.93□□□□□ -0.5
MRPL55-211ENST00000366738 TRIM37O94972 964 aa11.93□□□□□ -0.5
MRPL55-211ENST00000366738 NUP188Q5SRE5 1749 aa11.93□□□□□ -0.5
MRPL55-211ENST00000366738 CRYBG1Q9Y4K1 1723 aa11.93□□□□□ -0.5
MRPL55-211ENST00000366738 ADGRB1O14514 1584 aa11.92□□□□□ -0.5
MRPL55-211ENST00000366738 SIRT1Q96EB6 747 aa11.92□□□□□ -0.5
MRPL55-211ENST00000366738 PRAM1Q96QH2 718 aa11.91□□□□□ -0.5
MRPL55-211ENST00000366738 ANKARQ7Z5J8 1434 aa11.91□□□□□ -0.5
MRPL55-211ENST00000366738 APBA3O96018 575 aa11.9□□□□□ -0.5
MRPL55-211ENST00000366738 PRDM11Q9NQV5 511 aa11.89□□□□□ -0.51
MRPL55-211ENST00000366738 CAMTA1Q9Y6Y1 1673 aa11.89□□□□□ -0.51
MRPL55-211ENST00000366738 DLC1Q96QB1 1528 aa11.89□□□□□ -0.51
MRPL55-211ENST00000366738 PARD3Q8TEW0 1356 aa11.89□□□□□ -0.51
MRPL55-211ENST00000366738 SPATA31A1Q5TZJ5 1347 aa11.88□□□□□ -0.51
MRPL55-211ENST00000366738 FAM196AQ6ZSG2 479 aa11.88□□□□□ -0.51
MRPL55-211ENST00000366738 CCER1Q8TC90 406 aaPredicted RBP11.88□□□□□ -0.51
MRPL55-211ENST00000366738 GPRASP1Q5JY77 1395 aa11.88□□□□□ -0.51
MRPL55-211ENST00000366738 PRR36Q9H6K5 1346 aa11.87□□□□□ -0.51
MRPL55-211ENST00000366738 CHRNA2Q15822 529 aa11.87□□□□□ -0.51
MRPL55-211ENST00000366738 HIRIP3Q9BW71 556 aaPredicted RBP11.87□□□□□ -0.51
MRPL55-211ENST00000366738 STRN4Q9NRL3 753 aa11.87□□□□□ -0.51
MRPL55-211ENST00000366738 PPP1R1BQ9UD71 204 aaPredicted RBP11.87□□□□□ -0.51
MRPL55-211ENST00000366738 KIAA0232Q92628 1395 aa11.87□□□□□ -0.51
MRPL55-211ENST00000366738 UTRNP46939 3433 aa11.86□□□□□ -0.51
MRPL55-211ENST00000366738 PHRF1Q9P1Y6 1649 aaKnown RBP11.86□□□□□ -0.51
MRPL55-211ENST00000366738 POGKQ9P215 609 aa11.86□□□□□ -0.51
MRPL55-211ENST00000366738 USP35Q9P2H5 1018 aa11.86□□□□□ -0.51
MRPL55-211ENST00000366738 TRAK1Q9UPV9 953 aa11.86□□□□□ -0.51
MRPL55-211ENST00000366738 NINLQ9Y2I6 1382 aa11.85□□□□□ -0.51
MRPL55-211ENST00000366738 PAK3O75914 559 aaPredicted RBP11.85□□□□□ -0.51
MRPL55-211ENST00000366738 SIN3AQ96ST3 1273 aa11.85□□□□□ -0.51
MRPL55-211ENST00000366738 SPON1Q9HCB6 807 aa11.85□□□□□ -0.51
MRPL55-211ENST00000366738 KDM2AQ9Y2K7 1162 aa11.85□□□□□ -0.51
MRPL55-211ENST00000366738 TULP4Q9NRJ4 1543 aa11.85□□□□□ -0.51
MRPL55-211ENST00000366738 MINK1Q8N4C8 1332 aaPredicted RBP11.85□□□□□ -0.51
MRPL55-211ENST00000366738 NBPF8Q3BBV2 869 aa11.84□□□□□ -0.51
MRPL55-211ENST00000366738 NBPF14Q5TI25 921 aa11.84□□□□□ -0.51
MRPL55-211ENST00000366738 DCAF11Q8TEB1 546 aa11.84□□□□□ -0.51
MRPL55-211ENST00000366738 KCNQ2O43526 872 aa11.83□□□□□ -0.52
MRPL55-211ENST00000366738 ZC3H6P61129 1189 aaKnown RBP11.83□□□□□ -0.52
MRPL55-211ENST00000366738 NRKQ7Z2Y5 1582 aa11.83□□□□□ -0.52
MRPL55-211ENST00000366738 DCAF8L1A6NGE4 600 aa11.82□□□□□ -0.52
MRPL55-211ENST00000366738 PDE3BQ13370 1112 aa11.82□□□□□ -0.52
MRPL55-211ENST00000366738 NUTM2GQ5VZR2 741 aa11.82□□□□□ -0.52
MRPL55-211ENST00000366738 NGDNQ8NEJ9 315 aaKnown RBP11.82□□□□□ -0.52
MRPL55-211ENST00000366738 SSH2Q76I76 1423 aa11.82□□□□□ -0.52
MRPL55-211ENST00000366738 ARHGEF28Q8N1W1 1705 aaKnown RBP11.81□□□□□ -0.52
MRPL55-211ENST00000366738 CLSPNQ9HAW4 1339 aa11.81□□□□□ -0.52
MRPL55-211ENST00000366738 EIF3AQ14152 1382 aaKnown RBP11.8□□□□□ -0.52
MRPL55-211ENST00000366738 CASZ1Q86V15 1759 aa11.8□□□□□ -0.52
MRPL55-211ENST00000366738 NEUROD1Q13562 356 aa11.8□□□□□ -0.52
MRPL55-211ENST00000366738 LARP1Q6PKG0 1096 aaKnown RBP11.8□□□□□ -0.52
MRPL55-211ENST00000366738 BARGINQ6ZT62 677 aa11.8□□□□□ -0.52
MRPL55-211ENST00000366738 ANO8Q9HCE9 1232 aaPredicted RBP11.8□□□□□ -0.52
MRPL55-211ENST00000366738 MYOM1P52179 1685 aa11.8□□□□□ -0.52
MRPL55-211ENST00000366738 ATP7BP35670 1465 aa11.79□□□□□ -0.52
MRPL55-211ENST00000366738 WASLO00401 505 aaPredicted RBP11.79□□□□□ -0.52
MRPL55-211ENST00000366738 ZNF784Q8NCA9 323 aaPredicted RBP11.79□□□□□ -0.52
MRPL55-211ENST00000366738 ITSN1Q15811 1721 aa11.79□□□□□ -0.52
MRPL55-211ENST00000366738 LMO7Q8WWI1 1683 aa11.78□□□□□ -0.52
MRPL55-211ENST00000366738 PARP4Q9UKK3 1724 aaKnown RBP11.78□□□□□ -0.52
MRPL55-211ENST00000366738 EVA1CP58658 441 aa11.78□□□□□ -0.52
MRPL55-211ENST00000366738 TCP11L2Q8N4U5 519 aa11.78□□□□□ -0.52
MRPL55-211ENST00000366738 PDGFDQ9GZP0 370 aaPredicted RBP11.78□□□□□ -0.52
MRPL55-211ENST00000366738 PEAK1Q9H792 1746 aa11.77□□□□□ -0.52
MRPL55-211ENST00000366738 SENP3-EIF4A1A0A087X0R7 540 aa11.77□□□□□ -0.53
MRPL55-211ENST00000366738 RGPD3A6NKT7 1758 aaPredicted RBP11.77□□□□□ -0.53
MRPL55-211ENST00000366738 RGPD4Q7Z3J3 1758 aa11.77□□□□□ -0.53
MRPL55-211ENST00000366738 ZBTB7AO95365 584 aa11.76□□□□□ -0.53
MRPL55-211ENST00000366738 LRRC37A3O60309 1634 aa11.75□□□□□ -0.53
MRPL55-211ENST00000366738 SBF2Q86WG5 1849 aa11.75□□□□□ -0.53
MRPL55-211ENST00000366738 NBPF1Q3BBV0 1214 aa11.75□□□□□ -0.53
MRPL55-211ENST00000366738 PTF1AQ7RTS3 328 aa11.75□□□□□ -0.53
MRPL55-211ENST00000366738 STAC3Q96MF2 364 aa11.75□□□□□ -0.53
MRPL55-211ENST00000366738 OVOS2A0A0G2JMS6 1433 aa11.75□□□□□ -0.53
MRPL55-211ENST00000366738 OVOS2A0A0J9YW53 1432 aa11.75□□□□□ -0.53
MRPL55-211ENST00000366738 OVOS2Q6IE36 1432 aa11.75□□□□□ -0.53
MRPL55-211ENST00000366738 TOPAZ1Q8N9V7 1692 aa11.75□□□□□ -0.53
MRPL55-211ENST00000366738 NUDT16Q96DE0 195 aaKnown RBP11.74□□□□□ -0.53
MRPL55-211ENST00000366738 TONSLQ96HA7 1378 aa11.74□□□□□ -0.53
MRPL55-211ENST00000366738 COL5A2P05997 1499 aaPredicted RBP11.74□□□□□ -0.53
MRPL55-211ENST00000366738 CPDO75976 1380 aa11.73□□□□□ -0.53
MRPL55-211ENST00000366738 CDK19Q9BWU1 502 aa11.73□□□□□ -0.53
MRPL55-211ENST00000366738 KIAA1210Q9ULL0 1709 aa11.73□□□□□ -0.53
MRPL55-211ENST00000366738 CEP350Q5VT06 3117 aa11.73□□□□□ -0.53
MRPL55-211ENST00000366738 USP19O94966 1318 aa11.72□□□□□ -0.53
MRPL55-211ENST00000366738 PTGER2P43116 358 aa11.72□□□□□ -0.53
MRPL55-211ENST00000366738 BCL11BQ9C0K0 894 aaPredicted RBP11.72□□□□□ -0.53
MRPL55-211ENST00000366738 ATF5Q9Y2D1 282 aaPredicted RBP11.72□□□□□ -0.53
MRPL55-211ENST00000366738 CRB1P82279 1406 aa11.71□□□□□ -0.53
MRPL55-211ENST00000366738 POLR3AO14802 1390 aaPredicted RBP11.71□□□□□ -0.53
MRPL55-211ENST00000366738 ACEP12821 1306 aa11.71□□□□□ -0.53
MRPL55-211ENST00000366738 CHD4Q14839 1912 aa11.71□□□□□ -0.53
MRPL55-211ENST00000366738 ABTB2Q8N961 1025 aa11.71□□□□□ -0.53
MRPL55-211ENST00000366738 L3MBTL2Q969R5 705 aa11.71□□□□□ -0.53
MRPL55-211ENST00000366738 THRAP3Q9Y2W1 955 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms