RNA–Protein interactions for RNA: ENST00000362061.3

CACNA1S-201, Transcript of calcium voltage-gated channel subunit alpha1 S, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CACNA1S, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1S-201ENST00000362061 C9orf84Q5VXU9 1444 aa12.77□□□□□ -0.36
CACNA1S-201ENST00000362061 CC2D2AQ9P2K1 1620 aa12.77□□□□□ -0.37
CACNA1S-201ENST00000362061 CNTROBQ8N137 903 aa12.77□□□□□ -0.37
CACNA1S-201ENST00000362061 LRRC9Q6ZRR7 1453 aa12.76□□□□□ -0.37
CACNA1S-201ENST00000362061 NINLQ9Y2I6 1382 aa12.76□□□□□ -0.37
CACNA1S-201ENST00000362061 ZBED9Q6R2W3 1325 aa12.76□□□□□ -0.37
CACNA1S-201ENST00000362061 TWISTNBQ3B726 338 aaPredicted RBP12.76□□□□□ -0.37
CACNA1S-201ENST00000362061 ZSCAN29Q8IWY8 852 aaPredicted RBP12.76□□□□□ -0.37
CACNA1S-201ENST00000362061 DDX11L8A8MPP1 907 aa12.76□□□□□ -0.37
CACNA1S-201ENST00000362061 HFM1A2PYH4 1435 aa12.75□□□□□ -0.37
CACNA1S-201ENST00000362061 CCDC57Q2TAC2 916 aa12.75□□□□□ -0.37
CACNA1S-201ENST00000362061 NBPF1Q3BBV0 1214 aa12.75□□□□□ -0.37
CACNA1S-201ENST00000362061 KCNH5Q8NCM2 988 aa12.75□□□□□ -0.37
CACNA1S-201ENST00000362061 RPGRIP1LQ68CZ1 1315 aa12.75□□□□□ -0.37
CACNA1S-201ENST00000362061 SLC4A2P04920 1241 aa12.75□□□□□ -0.37
CACNA1S-201ENST00000362061 CNTLNQ9NXG0 1405 aa12.75□□□□□ -0.37
CACNA1S-201ENST00000362061 CT47A1Q5JQC4 288 aaPredicted RBP12.74□□□□□ -0.37
CACNA1S-201ENST00000362061 ERC1Q8IUD2 1116 aa12.74□□□□□ -0.37
CACNA1S-201ENST00000362061 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.74□□□□□ -0.37
CACNA1S-201ENST00000362061 IPO9Q96P70 1041 aaKnown RBP12.74□□□□□ -0.37
CACNA1S-201ENST00000362061 CFTRP13569 1480 aa12.74□□□□□ -0.37
CACNA1S-201ENST00000362061 CCAR2Q8N163 923 aaKnown RBP12.74□□□□□ -0.37
CACNA1S-201ENST00000362061 ADAMTS8Q9UP79 889 aa12.74□□□□□ -0.37
CACNA1S-201ENST00000362061 CD109Q6YHK3 1445 aa12.74□□□□□ -0.37
CACNA1S-201ENST00000362061 STARD3NLO95772 234 aa12.74□□□□□ -0.37
CACNA1S-201ENST00000362061 CCDC7Q96M83 1385 aa12.74□□□□□ -0.37
CACNA1S-201ENST00000362061 RRS1Q15050 365 aaKnown RBP12.74□□□□□ -0.37
CACNA1S-201ENST00000362061 PANK1Q8TE04 598 aa12.74□□□□□ -0.37
CACNA1S-201ENST00000362061 BTBD11A6QL63 1104 aa12.73□□□□□ -0.37
CACNA1S-201ENST00000362061 ZPR1O75312 459 aa12.73□□□□□ -0.37
CACNA1S-201ENST00000362061 PSMA5P28066 241 aa12.73□□□□□ -0.37
CACNA1S-201ENST00000362061 SIL1Q9H173 461 aa12.73□□□□□ -0.37
CACNA1S-201ENST00000362061 ERBINQ96RT1 1412 aa12.73□□□□□ -0.37
CACNA1S-201ENST00000362061 ODF2Q5BJF6 829 aa12.73□□□□□ -0.37
CACNA1S-201ENST00000362061 TROQ12816 1431 aaPredicted RBP12.73□□□□□ -0.37
CACNA1S-201ENST00000362061 CEBPAP49715 358 aaPredicted RBP12.72□□□□□ -0.37
CACNA1S-201ENST00000362061 NUDT16Q96DE0 195 aaKnown RBP12.72□□□□□ -0.37
CACNA1S-201ENST00000362061 EXOSC9Q06265 439 aaKnown RBP12.72□□□□□ -0.37
CACNA1S-201ENST00000362061 GNAI2P04899 355 aa12.72□□□□□ -0.37
CACNA1S-201ENST00000362061 STK11IPQ8N1F8 1099 aa12.72□□□□□ -0.37
CACNA1S-201ENST00000362061 NACAP1Q9BZK3 213 aa12.72□□□□□ -0.37
CACNA1S-201ENST00000362061 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.72□□□□□ -0.37
CACNA1S-201ENST00000362061 TOPBP1Q92547 1522 aa12.72□□□□□ -0.37
CACNA1S-201ENST00000362061 ATP2B1P20020 1258 aa12.72□□□□□ -0.37
CACNA1S-201ENST00000362061 TMOD3Q9NYL9 352 aa12.72□□□□□ -0.37
CACNA1S-201ENST00000362061 TMOD2Q9NZR1 351 aa12.72□□□□□ -0.37
CACNA1S-201ENST00000362061 FBXO3Q9UK99 471 aa12.72□□□□□ -0.37
CACNA1S-201ENST00000362061 PPP2R1AP30153 589 aa12.71□□□□□ -0.37
CACNA1S-201ENST00000362061 EPS15P42566 896 aa12.71□□□□□ -0.37
CACNA1S-201ENST00000362061 PDE4AP27815 886 aa12.71□□□□□ -0.37
CACNA1S-201ENST00000362061 CCDC70Q6NSX1 233 aa12.71□□□□□ -0.37
CACNA1S-201ENST00000362061 CCDC73Q6ZRK6 1079 aa12.71□□□□□ -0.37
CACNA1S-201ENST00000362061 PAXIP1Q6ZW49 1069 aaPredicted RBP12.71□□□□□ -0.37
CACNA1S-201ENST00000362061 SRCIN1Q9C0H9 1055 aa12.71□□□□□ -0.37
CACNA1S-201ENST00000362061 PAF1Q8N7H5 531 aa12.71□□□□□ -0.37
CACNA1S-201ENST00000362061 CCDC61Q9Y6R9 512 aa12.71□□□□□ -0.37
CACNA1S-201ENST00000362061 ARID3AQ99856 593 aa12.71□□□□□ -0.37
CACNA1S-201ENST00000362061 PTCD1O75127 700 aaKnown RBP12.71□□□□□ -0.38
CACNA1S-201ENST00000362061 PPP6R1Q9UPN7 881 aa12.71□□□□□ -0.38
CACNA1S-201ENST00000362061 ZNF652Q9Y2D9 606 aa12.71□□□□□ -0.38
CACNA1S-201ENST00000362061 IGHMBP2P38935 993 aaKnown RBP12.7□□□□□ -0.38
CACNA1S-201ENST00000362061 CDK5RAP3Q96JB5 506 aa12.7□□□□□ -0.38
CACNA1S-201ENST00000362061 HIP1O00291 1037 aa12.7□□□□□ -0.38
CACNA1S-201ENST00000362061 WDHD1O75717 1129 aaPredicted RBP12.7□□□□□ -0.38
CACNA1S-201ENST00000362061 DEKP35659 375 aaKnown RBP12.7□□□□□ -0.38
CACNA1S-201ENST00000362061 FOXO3O43524 673 aa12.7□□□□□ -0.38
CACNA1S-201ENST00000362061 ZFYVE27Q5T4F4 411 aa12.69□□□□□ -0.38
CACNA1S-201ENST00000362061 ATAD2Q6PL18 1390 aa12.69□□□□□ -0.38
CACNA1S-201ENST00000362061 CDC45O75419 566 aa12.69□□□□□ -0.38
CACNA1S-201ENST00000362061 CCDC85AQ96PX6 553 aaPredicted RBP12.69□□□□□ -0.38
CACNA1S-201ENST00000362061 OFD1O75665 1012 aa12.69□□□□□ -0.38
CACNA1S-201ENST00000362061 ANKRD30BQ9BXX2 1392 aa12.68□□□□□ -0.38
CACNA1S-201ENST00000362061 SKOR2Q2VWA4 1001 aaPredicted RBP12.68□□□□□ -0.38
CACNA1S-201ENST00000362061 KRT18P05783 430 aaKnown RBP12.68□□□□□ -0.38
CACNA1S-201ENST00000362061 RAI14Q9P0K7 980 aa12.68□□□□□ -0.38
CACNA1S-201ENST00000362061 POLA1P09884 1462 aaPredicted RBP12.68□□□□□ -0.38
CACNA1S-201ENST00000362061 NAP1L1P55209 391 aaKnown RBP12.68□□□□□ -0.38
CACNA1S-201ENST00000362061 WAPLQ7Z5K2 1190 aa12.68□□□□□ -0.38
CACNA1S-201ENST00000362061 DNAJC5BQ9UF47 199 aa12.68□□□□□ -0.38
CACNA1S-201ENST00000362061 CCT4P50991 539 aaKnown RBP12.68□□□□□ -0.38
CACNA1S-201ENST00000362061 CEP126Q9P2H0 1117 aa12.68□□□□□ -0.38
CACNA1S-201ENST00000362061 FKBP4Q02790 459 aaKnown RBP eCLIP12.67□□□□□ -0.38
CACNA1S-201ENST00000362061 TSR2Q969E8 191 aaKnown RBP12.67□□□□□ -0.38
CACNA1S-201ENST00000362061 AMOTL2Q9Y2J4 779 aa12.67□□□□□ -0.38
CACNA1S-201ENST00000362061 PHF8Q9UPP1 1060 aa12.67□□□□□ -0.38
CACNA1S-201ENST00000362061 KIF21BO75037 1637 aa12.67□□□□□ -0.38
CACNA1S-201ENST00000362061 UBAP1LF5GYI3 381 aa12.67□□□□□ -0.38
CACNA1S-201ENST00000362061 AAMPQ13685 434 aa12.67□□□□□ -0.38
CACNA1S-201ENST00000362061 MPRIPQ6WCQ1 1025 aa12.67□□□□□ -0.38
CACNA1S-201ENST00000362061 ZSCAN25Q6NSZ9 544 aa12.67□□□□□ -0.38
CACNA1S-201ENST00000362061 SASS6Q6UVJ0 657 aa12.67□□□□□ -0.38
CACNA1S-201ENST00000362061 C1orf115Q9H7X2 142 aa12.67□□□□□ -0.38
CACNA1S-201ENST00000362061 MPHOSPH10O00566 681 aaKnown RBP12.67□□□□□ -0.38
CACNA1S-201ENST00000362061 EXOC5O00471 708 aa12.66□□□□□ -0.38
CACNA1S-201ENST00000362061 BCL11BQ9C0K0 894 aaPredicted RBP12.66□□□□□ -0.38
CACNA1S-201ENST00000362061 LRP2BPQ9P2M1 347 aa12.66□□□□□ -0.38
CACNA1S-201ENST00000362061 TTLL12Q14166 644 aaPredicted RBP12.65□□□□□ -0.38
CACNA1S-201ENST00000362061 ZNF219Q9P2Y4 722 aaPredicted RBP12.65□□□□□ -0.38
CACNA1S-201ENST00000362061 SOGA3Q5TF21 947 aa12.65□□□□□ -0.38
CACNA1S-201ENST00000362061 KIAA1107Q9UPP5 1409 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms