RNA–Protein interactions for RNA: ENST00000361724.3

PCDH11X-203, Transcript of protocadherin 11 X-linked, humanhuman

TSL 1 (best)

Gene PCDH11X, Length 4,603 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-203ENST00000361724 SRGAP2BP0DMP2 458 aa4.1□□□□□ -1.75
PCDH11X-203ENST00000361724 DALRD3Q5D0E6 543 aaKnown RBP4.1□□□□□ -1.75
PCDH11X-203ENST00000361724 ZKSCAN4Q969J2 545 aaPredicted RBP4.1□□□□□ -1.75
PCDH11X-203ENST00000361724 MYBBP1AQ9BQG0 1328 aaKnown RBP4.1□□□□□ -1.75
PCDH11X-203ENST00000361724 HDGFL2Q7Z4V5 671 aaPredicted RBP4.09□□□□□ -1.75
PCDH11X-203ENST00000361724 NLGN1Q8N2Q7 840 aa4.09□□□□□ -1.75
PCDH11X-203ENST00000361724 ABCC3O15438 1527 aa4.09□□□□□ -1.75
PCDH11X-203ENST00000361724 PRMT2P55345 433 aa4.09□□□□□ -1.75
PCDH11X-203ENST00000361724 PROM2Q8N271 834 aa4.09□□□□□ -1.75
PCDH11X-203ENST00000361724 KIF2CQ99661 725 aa4.09□□□□□ -1.75
PCDH11X-203ENST00000361724 ZMYM3Q14202 1370 aa4.09□□□□□ -1.75
PCDH11X-203ENST00000361724 MYO1BO43795 1136 aa4.09□□□□□ -1.75
PCDH11X-203ENST00000361724 CEBPAP49715 358 aaPredicted RBP4.09□□□□□ -1.75
PCDH11X-203ENST00000361724 DEFB115Q30KQ5 88 aa4.09□□□□□ -1.75
PCDH11X-203ENST00000361724 EAPPQ56P03 285 aaPredicted RBP4.09□□□□□ -1.75
PCDH11X-203ENST00000361724 PKNOX2Q96KN3 472 aa4.09□□□□□ -1.75
PCDH11X-203ENST00000361724 SLC5A4Q9NY91 659 aa4.09□□□□□ -1.75
PCDH11X-203ENST00000361724 SMG6Q86US8 1419 aaKnown RBP4.09□□□□□ -1.76
PCDH11X-203ENST00000361724 ARHGAP5Q13017 1502 aa4.09□□□□□ -1.76
PCDH11X-203ENST00000361724 GLRX3O76003 335 aaKnown RBP4.09□□□□□ -1.76
PCDH11X-203ENST00000361724 SKIV2LQ15477 1246 aaKnown RBP4.09□□□□□ -1.76
PCDH11X-203ENST00000361724 TBC1D9Q6ZT07 1266 aa4.09□□□□□ -1.76
PCDH11X-203ENST00000361724 NUP160Q12769 1436 aa4.08□□□□□ -1.76
PCDH11X-203ENST00000361724 POLA1P09884 1462 aaPredicted RBP4.08□□□□□ -1.76
PCDH11X-203ENST00000361724 VPS72Q15906 364 aa4.08□□□□□ -1.76
PCDH11X-203ENST00000361724 TBX22Q9Y458 520 aa4.08□□□□□ -1.76
PCDH11X-203ENST00000361724 ATP10BO94823 1461 aa4.08□□□□□ -1.76
PCDH11X-203ENST00000361724 ARAP3Q8WWN8 1544 aa4.08□□□□□ -1.76
PCDH11X-203ENST00000361724 H7C1D1 291 aa4.08□□□□□ -1.76
PCDH11X-203ENST00000361724 NAA30Q147X3 362 aaPredicted RBP4.08□□□□□ -1.76
PCDH11X-203ENST00000361724 DIEXFQ68CQ4 756 aaKnown RBP4.08□□□□□ -1.76
PCDH11X-203ENST00000361724 POLR3GLQ9BT43 218 aa4.08□□□□□ -1.76
PCDH11X-203ENST00000361724 RAB23Q9ULC3 237 aa4.08□□□□□ -1.76
PCDH11X-203ENST00000361724 CEP170Q5SW79 1584 aa4.08□□□□□ -1.76
PCDH11X-203ENST00000361724 CHADLQ6NUI6 762 aa4.08□□□□□ -1.76
PCDH11X-203ENST00000361724 DHX37Q8IY37 1157 aaKnown RBP4.08□□□□□ -1.76
PCDH11X-203ENST00000361724 NCOA1Q15788 1441 aa4.07□□□□□ -1.76
PCDH11X-203ENST00000361724 KCNA4P22459 653 aa4.07□□□□□ -1.76
PCDH11X-203ENST00000361724 NOGQ13253 232 aa4.07□□□□□ -1.76
PCDH11X-203ENST00000361724 NOM1Q5C9Z4 860 aaKnown RBP4.07□□□□□ -1.76
PCDH11X-203ENST00000361724 ERICH6BQ5W0A0 696 aa4.07□□□□□ -1.76
PCDH11X-203ENST00000361724 ARHGAP35Q9NRY4 1499 aa4.07□□□□□ -1.76
PCDH11X-203ENST00000361724 MYOM3Q5VTT5 1437 aa4.07□□□□□ -1.76
PCDH11X-203ENST00000361724 ZBTB24O43167 697 aaPredicted RBP4.07□□□□□ -1.76
PCDH11X-203ENST00000361724 ARMC9Q7Z3E5 817 aa4.07□□□□□ -1.76
PCDH11X-203ENST00000361724 ZBTB33Q86T24 672 aa4.07□□□□□ -1.76
PCDH11X-203ENST00000361724 TCP11L2Q8N4U5 519 aa4.07□□□□□ -1.76
PCDH11X-203ENST00000361724 KCNH4Q9UQ05 1017 aa4.07□□□□□ -1.76
PCDH11X-203ENST00000361724 URB2Q14146 1524 aaKnown RBP4.07□□□□□ -1.76
PCDH11X-203ENST00000361724 KDM5BQ9UGL1 1544 aa4.07□□□□□ -1.76
PCDH11X-203ENST00000361724 SALL3Q9BXA9 1300 aa4.07□□□□□ -1.76
PCDH11X-203ENST00000361724 CTU1Q7Z7A3 348 aaKnown RBP4.07□□□□□ -1.76
PCDH11X-203ENST00000361724 CNKSR1Q969H4 720 aa4.07□□□□□ -1.76
PCDH11X-203ENST00000361724 EXOC4Q96A65 974 aa4.07□□□□□ -1.76
PCDH11X-203ENST00000361724 MPHOSPH6Q99547 160 aaKnown RBP4.07□□□□□ -1.76
PCDH11X-203ENST00000361724 HINFPQ9BQA5 517 aa4.07□□□□□ -1.76
PCDH11X-203ENST00000361724 PIM2Q9P1W9 311 aa4.07□□□□□ -1.76
PCDH11X-203ENST00000361724 GJA3Q9Y6H8 435 aa4.07□□□□□ -1.76
PCDH11X-203ENST00000361724 PTPRUQ92729 1446 aa4.07□□□□□ -1.76
PCDH11X-203ENST00000361724 SPDYE4A6NLX3 237 aa4.07□□□□□ -1.76
PCDH11X-203ENST00000361724 RFC4P35249 363 aa4.07□□□□□ -1.76
PCDH11X-203ENST00000361724 SAMD7Q7Z3H4 446 aa4.07□□□□□ -1.76
PCDH11X-203ENST00000361724 ENGASEQ8NFI3 743 aa4.07□□□□□ -1.76
PCDH11X-203ENST00000361724 DCPSQ96C86 337 aaKnown RBP4.07□□□□□ -1.76
PCDH11X-203ENST00000361724 NUDT16Q96DE0 195 aaKnown RBP4.07□□□□□ -1.76
PCDH11X-203ENST00000361724 ANKFY1Q9P2R3 1169 aa4.07□□□□□ -1.76
PCDH11X-203ENST00000361724 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.07□□□□□ -1.76
PCDH11X-203ENST00000361724 MNX1P50219 401 aaPredicted RBP4.06□□□□□ -1.76
PCDH11X-203ENST00000361724 ABHD8Q96I13 439 aa4.06□□□□□ -1.76
PCDH11X-203ENST00000361724 TMEM94Q12767 1356 aa4.06□□□□□ -1.76
PCDH11X-203ENST00000361724 CUX1P39880 1505 aa4.06□□□□□ -1.76
PCDH11X-203ENST00000361724 TMEM265A0A087WTH1 108 aa4.06□□□□□ -1.76
PCDH11X-203ENST00000361724 TMEM88BA6NKF7 163 aa4.06□□□□□ -1.76
PCDH11X-203ENST00000361724 NCLP19338 710 aaKnown RBP4.06□□□□□ -1.76
PCDH11X-203ENST00000361724 SUGP1Q8IWZ8 645 aaKnown RBP4.06□□□□□ -1.76
PCDH11X-203ENST00000361724 P2RX7Q99572 595 aaKnown RBP4.06□□□□□ -1.76
PCDH11X-203ENST00000361724 RNF181Q9P0P0 153 aa4.06□□□□□ -1.76
PCDH11X-203ENST00000361724 RAPGEF2Q9Y4G8 1499 aa4.06□□□□□ -1.76
PCDH11X-203ENST00000361724 NUTM2FA1L443 756 aa4.06□□□□□ -1.76
PCDH11X-203ENST00000361724 H0YIN7 160 aa4.06□□□□□ -1.76
PCDH11X-203ENST00000361724 MDM2Q00987 491 aaPredicted RBP4.06□□□□□ -1.76
PCDH11X-203ENST00000361724 PABPC4Q13310 644 aaKnown RBP eCLIP4.06□□□□□ -1.76
PCDH11X-203ENST00000361724 NOL10Q9BSC4 688 aaKnown RBP4.06□□□□□ -1.76
PCDH11X-203ENST00000361724 RPGRIP1LQ68CZ1 1315 aa4.06□□□□□ -1.76
PCDH11X-203ENST00000361724 TATP17735 454 aaPredicted RBP4.06□□□□□ -1.76
PCDH11X-203ENST00000361724 TNIP1Q15025 636 aa4.06□□□□□ -1.76
PCDH11X-203ENST00000361724 VWDEQ8N2E2 1590 aa4.05□□□□□ -1.76
PCDH11X-203ENST00000361724 KIF28PB7ZC32 967 aa4.05□□□□□ -1.76
PCDH11X-203ENST00000361724 FOXD2O60548 495 aaPredicted RBP4.05□□□□□ -1.76
PCDH11X-203ENST00000361724 FMNL1O95466 1100 aaPredicted RBP4.05□□□□□ -1.76
PCDH11X-203ENST00000361724 MAP2K2P36507 400 aa4.05□□□□□ -1.76
PCDH11X-203ENST00000361724 ZNF697Q5TEC3 545 aa4.05□□□□□ -1.76
PCDH11X-203ENST00000361724 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.05□□□□□ -1.76
PCDH11X-203ENST00000361724 CCDC7Q96M83 1385 aa4.05□□□□□ -1.76
PCDH11X-203ENST00000361724 ANKRD30AQ9BXX3 1397 aa4.05□□□□□ -1.76
PCDH11X-203ENST00000361724 EN1Q05925 392 aaPredicted RBP4.05□□□□□ -1.76
PCDH11X-203ENST00000361724 NONOQ15233 471 aaKnown RBP eCLIP4.05□□□□□ -1.76
PCDH11X-203ENST00000361724 EYA3Q99504 573 aa4.05□□□□□ -1.76
PCDH11X-203ENST00000361724 ABCA10Q8WWZ4 1543 aa4.05□□□□□ -1.76
PCDH11X-203ENST00000361724 PLCH2O75038 1416 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms