RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 CFAP53Q96M91 514 aa11.58□□□□□ -0.56
TOP1-201ENST00000361337 PREX1Q8TCU6 1659 aa11.58□□□□□ -0.56
TOP1-201ENST00000361337 BCL2L13Q9BXK5 485 aa11.58□□□□□ -0.56
TOP1-201ENST00000361337 NOS1P29475 1434 aa11.57□□□□□ -0.56
TOP1-201ENST00000361337 RRAGDQ9NQL2 400 aaPredicted RBP11.57□□□□□ -0.56
TOP1-201ENST00000361337 EVC2Q86UK5 1308 aa11.57□□□□□ -0.56
TOP1-201ENST00000361337 CLUAP1Q96AJ1 413 aa11.57□□□□□ -0.56
TOP1-201ENST00000361337 CARD14Q9BXL6 1004 aa11.57□□□□□ -0.56
TOP1-201ENST00000361337 RLBP1P12271 317 aa11.57□□□□□ -0.56
TOP1-201ENST00000361337 NLRP1Q9C000 1473 aa11.57□□□□□ -0.56
TOP1-201ENST00000361337 NCKAP5LQ9HCH0 1330 aa11.56□□□□□ -0.56
TOP1-201ENST00000361337 SHPRHQ149N8 1683 aa11.56□□□□□ -0.56
TOP1-201ENST00000361337 MYOM2P54296 1465 aa11.56□□□□□ -0.56
TOP1-201ENST00000361337 PCDHB15Q9Y5E8 787 aa11.56□□□□□ -0.56
TOP1-201ENST00000361337 ASXL1Q8IXJ9 1541 aa11.56□□□□□ -0.56
TOP1-201ENST00000361337 NRXN3Q9Y4C0 1643 aa11.56□□□□□ -0.56
TOP1-201ENST00000361337 E9PSI1 815 aa11.56□□□□□ -0.56
TOP1-201ENST00000361337 FAM43AQ8N2R8 423 aa11.56□□□□□ -0.56
TOP1-201ENST00000361337 ANTXR1Q9H6X2 564 aa11.56□□□□□ -0.56
TOP1-201ENST00000361337 ANP32BQ92688 251 aaKnown RBP11.55□□□□□ -0.56
TOP1-201ENST00000361337 CDK19Q9BWU1 502 aa11.55□□□□□ -0.56
TOP1-201ENST00000361337 TERF2IPQ9NYB0 399 aa11.55□□□□□ -0.56
TOP1-201ENST00000361337 PIK3C2GO75747 1445 aa11.55□□□□□ -0.56
TOP1-201ENST00000361337 MLH3Q9UHC1 1453 aa11.55□□□□□ -0.56
TOP1-201ENST00000361337 WWC1Q8IX03 1113 aa11.54□□□□□ -0.56
TOP1-201ENST00000361337 THEMISQ8N1K5 641 aaPredicted RBP11.54□□□□□ -0.56
TOP1-201ENST00000361337 TPRNQ4KMQ1 711 aa11.54□□□□□ -0.56
TOP1-201ENST00000361337 AGLP35573 1532 aa11.53□□□□□ -0.56
TOP1-201ENST00000361337 TBC1D2Q9BYX2 928 aa11.53□□□□□ -0.56
TOP1-201ENST00000361337 ELL2O00472 640 aaPredicted RBP11.52□□□□□ -0.56
TOP1-201ENST00000361337 MAPK8IP3Q9UPT6 1336 aa11.52□□□□□ -0.56
TOP1-201ENST00000361337 HMOX1P09601 288 aa11.52□□□□□ -0.57
TOP1-201ENST00000361337 CGNL1Q0VF96 1302 aa11.52□□□□□ -0.57
TOP1-201ENST00000361337 DNAJC5Q9H3Z4 198 aa11.52□□□□□ -0.57
TOP1-201ENST00000361337 PDE3AQ14432 1141 aa11.52□□□□□ -0.57
TOP1-201ENST00000361337 PROSER2Q86WR7 435 aaPredicted RBP11.52□□□□□ -0.57
TOP1-201ENST00000361337 PANK2Q9BZ23 570 aa11.52□□□□□ -0.57
TOP1-201ENST00000361337 ABCC3O15438 1527 aa11.52□□□□□ -0.57
TOP1-201ENST00000361337 PDZRN3Q9UPQ7 1066 aa11.51□□□□□ -0.57
TOP1-201ENST00000361337 ADGRB1O14514 1584 aa11.51□□□□□ -0.57
TOP1-201ENST00000361337 ESCO1Q5FWF5 840 aa11.51□□□□□ -0.57
TOP1-201ENST00000361337 SCAF11Q99590 1463 aaKnown RBP11.51□□□□□ -0.57
TOP1-201ENST00000361337 TOPAZ1Q8N9V7 1692 aa11.51□□□□□ -0.57
TOP1-201ENST00000361337 MTHFSP49914 203 aa11.51□□□□□ -0.57
TOP1-201ENST00000361337 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.51□□□□□ -0.57
TOP1-201ENST00000361337 RARSP54136 660 aaKnown RBP11.5□□□□□ -0.57
TOP1-201ENST00000361337 ZMYM3Q14202 1370 aa11.5□□□□□ -0.57
TOP1-201ENST00000361337 TBC1D32Q96NH3 1257 aa11.5□□□□□ -0.57
TOP1-201ENST00000361337 AMOTL2Q9Y2J4 779 aa11.5□□□□□ -0.57
TOP1-201ENST00000361337 BECN1Q14457 450 aa11.5□□□□□ -0.57
TOP1-201ENST00000361337 MARF1Q9Y4F3 1742 aaKnown RBP11.5□□□□□ -0.57
TOP1-201ENST00000361337 ANKLE2Q86XL3 938 aa11.49□□□□□ -0.57
TOP1-201ENST00000361337 NEO1Q92859 1461 aa11.49□□□□□ -0.57
TOP1-201ENST00000361337 XRCC6P12956 609 aaKnown RBP eCLIP11.49□□□□□ -0.57
TOP1-201ENST00000361337 NCLP19338 710 aaKnown RBP11.49□□□□□ -0.57
TOP1-201ENST00000361337 AMPHP49418 695 aa11.49□□□□□ -0.57
TOP1-201ENST00000361337 PSME1Q06323 249 aa11.49□□□□□ -0.57
TOP1-201ENST00000361337 MAPK8IP2Q13387 824 aaPredicted RBP11.49□□□□□ -0.57
TOP1-201ENST00000361337 RRS1Q15050 365 aaKnown RBP11.48□□□□□ -0.57
TOP1-201ENST00000361337 CSB-PGBD3P0DP91 1061 aa11.48□□□□□ -0.57
TOP1-201ENST00000361337 UPF2Q9HAU5 1272 aaKnown RBP11.48□□□□□ -0.57
TOP1-201ENST00000361337 POGZQ7Z3K3 1410 aa11.48□□□□□ -0.57
TOP1-201ENST00000361337 NPC1L1Q9UHC9 1359 aa11.47□□□□□ -0.57
TOP1-201ENST00000361337 NLRP6P59044 892 aa11.47□□□□□ -0.57
TOP1-201ENST00000361337 TCP11L2Q8N4U5 519 aa11.47□□□□□ -0.57
TOP1-201ENST00000361337 DNTTIP2Q5QJE6 756 aaKnown RBP11.47□□□□□ -0.57
TOP1-201ENST00000361337 C14orf93Q9H972 538 aaKnown RBP11.47□□□□□ -0.57
TOP1-201ENST00000361337 VIRMAQ69YN4 1812 aaKnown RBP11.47□□□□□ -0.57
TOP1-201ENST00000361337 ERVK-7P63135 1459 aa11.47□□□□□ -0.57
TOP1-201ENST00000361337 FOXO3O43524 673 aa11.46□□□□□ -0.57
TOP1-201ENST00000361337 COG3Q96JB2 828 aa11.46□□□□□ -0.57
TOP1-201ENST00000361337 NRKQ7Z2Y5 1582 aa11.46□□□□□ -0.57
TOP1-201ENST00000361337 ZRANB1Q9UGI0 708 aa11.46□□□□□ -0.57
TOP1-201ENST00000361337 NEXMIFQ5QGS0 1516 aa11.46□□□□□ -0.58
TOP1-201ENST00000361337 ARHGEF40Q8TER5 1519 aa11.46□□□□□ -0.58
TOP1-201ENST00000361337 FAM13BQ9NYF5 915 aa11.45□□□□□ -0.58
TOP1-201ENST00000361337 LTKP29376 864 aa11.45□□□□□ -0.58
TOP1-201ENST00000361337 MFAP1P55081 439 aaKnown RBP11.45□□□□□ -0.58
TOP1-201ENST00000361337 RBM10P98175 930 aaKnown RBP11.45□□□□□ -0.58
TOP1-201ENST00000361337 CDK11BP21127 795 aaKnown RBP11.45□□□□□ -0.58
TOP1-201ENST00000361337 NUDT16Q96DE0 195 aaKnown RBP11.45□□□□□ -0.58
TOP1-201ENST00000361337 SPATA31D1Q6ZQQ2 1576 aa11.44□□□□□ -0.58
TOP1-201ENST00000361337 ZNF142P52746 1687 aaPredicted RBP11.44□□□□□ -0.58
TOP1-201ENST00000361337 NPATQ14207 1427 aa11.44□□□□□ -0.58
TOP1-201ENST00000361337 MCM4P33991 863 aa11.44□□□□□ -0.58
TOP1-201ENST00000361337 ABTB2Q8N961 1025 aa11.44□□□□□ -0.58
TOP1-201ENST00000361337 TNRQ92752 1358 aa11.44□□□□□ -0.58
TOP1-201ENST00000361337 NME9Q86XW9 330 aa11.44□□□□□ -0.58
TOP1-201ENST00000361337 TSR2Q969E8 191 aaKnown RBP11.43□□□□□ -0.58
TOP1-201ENST00000361337 ARHGAP31Q2M1Z3 1444 aa11.43□□□□□ -0.58
TOP1-201ENST00000361337 FSD2A1L4K1 749 aa11.43□□□□□ -0.58
TOP1-201ENST00000361337 QRICH2Q9H0J4 1663 aa11.42□□□□□ -0.58
TOP1-201ENST00000361337 AKAP12Q02952 1782 aa11.42□□□□□ -0.58
TOP1-201ENST00000361337 GOLGA6L3A6NEY3 463 aa11.42□□□□□ -0.58
TOP1-201ENST00000361337 L1TD1Q5T7N2 865 aaKnown RBP11.42□□□□□ -0.58
TOP1-201ENST00000361337 NALCNQ8IZF0 1738 aa11.42□□□□□ -0.58
TOP1-201ENST00000361337 POLR3AO14802 1390 aaPredicted RBP11.42□□□□□ -0.58
TOP1-201ENST00000361337 ATF3P18847 181 aa11.42□□□□□ -0.58
TOP1-201ENST00000361337 ZNF428Q96B54 188 aa11.42□□□□□ -0.58
TOP1-201ENST00000361337 RUNDC1Q96C34 613 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms