RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 CABLES1Q8TDN4 633 aa10.05□□□□□ -0.8
CLCN3-202ENST00000360642 HMX1Q9NP08 348 aaPredicted RBP10.05□□□□□ -0.8
CLCN3-202ENST00000360642 ARHGEF5Q12774 1597 aa10.05□□□□□ -0.8
CLCN3-202ENST00000360642 PTPRGP23470 1445 aa10.05□□□□□ -0.8
CLCN3-202ENST00000360642 GUCA2AQ02747 115 aa10.04□□□□□ -0.8
CLCN3-202ENST00000360642 TSC1Q92574 1164 aa10.04□□□□□ -0.8
CLCN3-202ENST00000360642 TRAIPQ9BWF2 469 aa10.04□□□□□ -0.8
CLCN3-202ENST00000360642 SMAPO00193 183 aa10.04□□□□□ -0.8
CLCN3-202ENST00000360642 ADGRG1Q9Y653 693 aa10.04□□□□□ -0.8
CLCN3-202ENST00000360642 RTL5Q5HYW3 569 aaPredicted RBP10.03□□□□□ -0.8
CLCN3-202ENST00000360642 KIF7Q2M1P5 1343 aa10.03□□□□□ -0.8
CLCN3-202ENST00000360642 SHROOM2Q13796 1616 aa10.02□□□□□ -0.81
CLCN3-202ENST00000360642 DDX11L8A8MPP1 907 aa10.02□□□□□ -0.81
CLCN3-202ENST00000360642 PRKRIP1Q9H875 184 aaPredicted RBP10.02□□□□□ -0.81
CLCN3-202ENST00000360642 FAM198AQ9UFP1 575 aa10.02□□□□□ -0.81
CLCN3-202ENST00000360642 UHRF1BP1Q6BDS2 1440 aa10.02□□□□□ -0.81
CLCN3-202ENST00000360642 CDC42BPBQ9Y5S2 1711 aa10.02□□□□□ -0.81
CLCN3-202ENST00000360642 SPIRE2Q8WWL2 714 aa10.01□□□□□ -0.81
CLCN3-202ENST00000360642 PREX2Q70Z35 1606 aa10.01□□□□□ -0.81
CLCN3-202ENST00000360642 NUP155O75694 1391 aa10.01□□□□□ -0.81
CLCN3-202ENST00000360642 SAMD9LQ8IVG5 1584 aa10.01□□□□□ -0.81
CLCN3-202ENST00000360642 POTEFA5A3E0 1075 aa10.01□□□□□ -0.81
CLCN3-202ENST00000360642 SEC24BO95487 1268 aa10.01□□□□□ -0.81
CLCN3-202ENST00000360642 EPS8L1Q8TE68 723 aa10.01□□□□□ -0.81
CLCN3-202ENST00000360642 HAX1O00165 279 aa10.01□□□□□ -0.81
CLCN3-202ENST00000360642 TSPY4P0CV99 314 aa10.01□□□□□ -0.81
CLCN3-202ENST00000360642 TSPY10P0CW01 314 aa10.01□□□□□ -0.81
CLCN3-202ENST00000360642 CHD1O14646 1710 aa10.01□□□□□ -0.81
CLCN3-202ENST00000360642 HNRNPMP52272 730 aaKnown RBP eCLIP10□□□□□ -0.81
CLCN3-202ENST00000360642 VAC14Q08AM6 782 aa10□□□□□ -0.81
CLCN3-202ENST00000360642 CCDC184Q52MB2 194 aa10□□□□□ -0.81
CLCN3-202ENST00000360642 KIF15Q9NS87 1388 aa10□□□□□ -0.81
CLCN3-202ENST00000360642 ARHGEF12Q9NZN5 1544 aa10□□□□□ -0.81
CLCN3-202ENST00000360642 KDM5CP41229 1560 aa9.99□□□□□ -0.81
CLCN3-202ENST00000360642 RIC3Q7Z5B4 369 aa9.99□□□□□ -0.81
CLCN3-202ENST00000360642 PTCD2Q8WV60 388 aaKnown RBP9.99□□□□□ -0.81
CLCN3-202ENST00000360642 CCDC141Q6ZP82 1450 aa9.99□□□□□ -0.81
CLCN3-202ENST00000360642 HNRNPUQ00839 825 aaKnown RBP eCLIP9.99□□□□□ -0.81
CLCN3-202ENST00000360642 RSPH4AQ5TD94 716 aa9.99□□□□□ -0.81
CLCN3-202ENST00000360642 C6orf132Q5T0Z8 1188 aa9.99□□□□□ -0.81
CLCN3-202ENST00000360642 HDGFL1Q5TGJ6 251 aa9.99□□□□□ -0.81
CLCN3-202ENST00000360642 BCORL1Q5H9F3 1711 aa9.98□□□□□ -0.81
CLCN3-202ENST00000360642 CNGB1Q14028 1251 aaPredicted RBP9.98□□□□□ -0.81
CLCN3-202ENST00000360642 ZNF454Q8N9F8 522 aa9.98□□□□□ -0.81
CLCN3-202ENST00000360642 USP47Q96K76 1375 aa9.98□□□□□ -0.81
CLCN3-202ENST00000360642 RALGAPBQ86X10 1494 aa9.98□□□□□ -0.81
CLCN3-202ENST00000360642 NEFLP07196 543 aa9.98□□□□□ -0.81
CLCN3-202ENST00000360642 ADAM33Q9BZ11 813 aa9.98□□□□□ -0.81
CLCN3-202ENST00000360642 ARID4BQ4LE39 1312 aaPredicted RBP9.97□□□□□ -0.81
CLCN3-202ENST00000360642 NUDT7P0C024 238 aa9.97□□□□□ -0.81
CLCN3-202ENST00000360642 MAST1Q9Y2H9 1570 aa9.97□□□□□ -0.81
CLCN3-202ENST00000360642 DHX29Q7Z478 1369 aaKnown RBP9.97□□□□□ -0.81
CLCN3-202ENST00000360642 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.97□□□□□ -0.81
CLCN3-202ENST00000360642 PHF14O94880 888 aa9.96□□□□□ -0.81
CLCN3-202ENST00000360642 ANO8Q9HCE9 1232 aaPredicted RBP9.96□□□□□ -0.81
CLCN3-202ENST00000360642 TTC37Q6PGP7 1564 aa9.96□□□□□ -0.82
CLCN3-202ENST00000360642 FAM135AQ9P2D6 1515 aa9.96□□□□□ -0.82
CLCN3-202ENST00000360642 NUTM2BA6NNL0 878 aaPredicted RBP9.95□□□□□ -0.82
CLCN3-202ENST00000360642 NUTM2EB1AL46 878 aaPredicted RBP9.95□□□□□ -0.82
CLCN3-202ENST00000360642 NUTM2DQ5VT03 806 aaPredicted RBP9.95□□□□□ -0.82
CLCN3-202ENST00000360642 NUTM2AQ8IVF1 878 aaPredicted RBP9.95□□□□□ -0.82
CLCN3-202ENST00000360642 ABCC2Q92887 1545 aa9.95□□□□□ -0.82
CLCN3-202ENST00000360642 USP17L8P0C7I0 530 aa9.95□□□□□ -0.82
CLCN3-202ENST00000360642 RCCD1A6NED2 376 aa9.95□□□□□ -0.82
CLCN3-202ENST00000360642 GPR37L1O60883 481 aa9.95□□□□□ -0.82
CLCN3-202ENST00000360642 ERCC6L2Q5T890 1561 aa9.94□□□□□ -0.82
CLCN3-202ENST00000360642 CDCA7LQ96GN5 454 aa9.94□□□□□ -0.82
CLCN3-202ENST00000360642 SYCP2Q9BX26 1530 aa9.94□□□□□ -0.82
CLCN3-202ENST00000360642 ASTLQ6HA08 431 aaPredicted RBP9.94□□□□□ -0.82
CLCN3-202ENST00000360642 UNC13BO14795 1591 aa9.94□□□□□ -0.82
CLCN3-202ENST00000360642 CTDSPL2Q05D32 466 aa9.94□□□□□ -0.82
CLCN3-202ENST00000360642 LRRN4Q8WUT4 740 aa9.94□□□□□ -0.82
CLCN3-202ENST00000360642 MRS2Q9HD23 443 aa9.94□□□□□ -0.82
CLCN3-202ENST00000360642 ARHGAP5Q13017 1502 aa9.93□□□□□ -0.82
CLCN3-202ENST00000360642 ZNF326Q5BKZ1 582 aaKnown RBP9.93□□□□□ -0.82
CLCN3-202ENST00000360642 C3orf67Q6ZVT6 689 aa9.93□□□□□ -0.82
CLCN3-202ENST00000360642 PLXNC1O60486 1568 aa9.92□□□□□ -0.82
CLCN3-202ENST00000360642 COL9A1P20849 921 aa9.92□□□□□ -0.82
CLCN3-202ENST00000360642 PCDHGA4Q9Y5G9 962 aa9.92□□□□□ -0.82
CLCN3-202ENST00000360642 ZBED9Q6R2W3 1325 aa9.92□□□□□ -0.82
CLCN3-202ENST00000360642 MYO5CQ9NQX4 1742 aa9.92□□□□□ -0.82
CLCN3-202ENST00000360642 SCNN1AP37088 669 aa9.92□□□□□ -0.82
CLCN3-202ENST00000360642 PLEKHH2Q8IVE3 1493 aa9.91□□□□□ -0.82
CLCN3-202ENST00000360642 ROCK2O75116 1388 aaKnown RBP9.91□□□□□ -0.82
CLCN3-202ENST00000360642 SENP3-EIF4A1A0A087X0R7 540 aa9.91□□□□□ -0.82
CLCN3-202ENST00000360642 CFAP70Q5T0N1 1121 aa9.91□□□□□ -0.82
CLCN3-202ENST00000360642 RSBN1LQ6PCB5 846 aaPredicted RBP9.91□□□□□ -0.82
CLCN3-202ENST00000360642 FAM9BQ8IZU0 186 aa9.91□□□□□ -0.82
CLCN3-202ENST00000360642 SYMPKQ92797 1274 aaKnown RBP9.91□□□□□ -0.82
CLCN3-202ENST00000360642 TYW1BQ6NUM6 668 aa9.91□□□□□ -0.82
CLCN3-202ENST00000360642 CARD11Q9BXL7 1154 aa9.91□□□□□ -0.82
CLCN3-202ENST00000360642 PLA2R1Q13018 1463 aa9.91□□□□□ -0.82
CLCN3-202ENST00000360642 OATP04181 439 aa9.9□□□□□ -0.82
CLCN3-202ENST00000360642 UHRF1BP1LA0JNW5 1464 aa9.9□□□□□ -0.82
CLCN3-202ENST00000360642 CLASP1Q7Z460 1538 aa9.9□□□□□ -0.82
CLCN3-202ENST00000360642 IVNS1ABPQ9Y6Y0 642 aa9.9□□□□□ -0.82
CLCN3-202ENST00000360642 IQGAP3Q86VI3 1631 aa9.9□□□□□ -0.82
CLCN3-202ENST00000360642 DCAF11Q8TEB1 546 aa9.9□□□□□ -0.83
CLCN3-202ENST00000360642 GJD4Q96KN9 370 aaPredicted RBP9.9□□□□□ -0.83
CLCN3-202ENST00000360642 TSKSQ9UJT2 592 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms