RNA–Protein interactions for RNA: ENST00000360212.6

CD46-206, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-206ENST00000360212 PRDM2Q13029 1718 aa10.58□□□□□ -0.72
CD46-206ENST00000360212 ELL2O00472 640 aaPredicted RBP10.57□□□□□ -0.72
CD46-206ENST00000360212 U2SURPO15042 1029 aaKnown RBP10.57□□□□□ -0.72
CD46-206ENST00000360212 LRSAM1Q6UWE0 723 aa10.57□□□□□ -0.72
CD46-206ENST00000360212 RUNDC1Q96C34 613 aa10.57□□□□□ -0.72
CD46-206ENST00000360212 GAPVD1Q14C86 1478 aa10.57□□□□□ -0.72
CD46-206ENST00000360212 IRX3P78415 501 aaPredicted RBP10.57□□□□□ -0.72
CD46-206ENST00000360212 CC2D2AQ9P2K1 1620 aa10.57□□□□□ -0.72
CD46-206ENST00000360212 HMGXB3Q12766 1538 aa10.57□□□□□ -0.72
CD46-206ENST00000360212 ARHGEF12Q9NZN5 1544 aa10.57□□□□□ -0.72
CD46-206ENST00000360212 NINLQ9Y2I6 1382 aa10.56□□□□□ -0.72
CD46-206ENST00000360212 NUCB1Q02818 461 aa10.56□□□□□ -0.72
CD46-206ENST00000360212 SPC24Q8NBT2 197 aa10.56□□□□□ -0.72
CD46-206ENST00000360212 DDX19BQ9UMR2 479 aa10.56□□□□□ -0.72
CD46-206ENST00000360212 KCNJ4P48050 445 aa10.56□□□□□ -0.72
CD46-206ENST00000360212 MTHFSP49914 203 aa10.56□□□□□ -0.72
CD46-206ENST00000360212 ATF7IPQ6VMQ6 1270 aa10.56□□□□□ -0.72
CD46-206ENST00000360212 A2MP01023 1474 aa10.56□□□□□ -0.72
CD46-206ENST00000360212 ERICH4A6NGS2 130 aa10.55□□□□□ -0.72
CD46-206ENST00000360212 HDAC1Q13547 482 aaPredicted RBP10.55□□□□□ -0.72
CD46-206ENST00000360212 NAA30Q147X3 362 aaPredicted RBP10.55□□□□□ -0.72
CD46-206ENST00000360212 AEBP1Q8IUX7 1158 aa10.55□□□□□ -0.72
CD46-206ENST00000360212 FAM135AQ9P2D6 1515 aa10.55□□□□□ -0.72
CD46-206ENST00000360212 NUCB2P80303 420 aa10.55□□□□□ -0.72
CD46-206ENST00000360212 C16orf71Q8IYS4 520 aaPredicted RBP10.55□□□□□ -0.72
CD46-206ENST00000360212 ZDHHC9Q9Y397 364 aa10.55□□□□□ -0.72
CD46-206ENST00000360212 C9orf84Q5VXU9 1444 aa10.55□□□□□ -0.72
CD46-206ENST00000360212 TAF3Q5VWG9 929 aa10.54□□□□□ -0.72
CD46-206ENST00000360212 CUL7Q14999 1698 aa10.54□□□□□ -0.72
CD46-206ENST00000360212 RGS22Q8NE09 1264 aa10.54□□□□□ -0.72
CD46-206ENST00000360212 RIOK3O14730 519 aaKnown RBP10.54□□□□□ -0.72
CD46-206ENST00000360212 CHRM1P11229 460 aaPredicted RBP10.54□□□□□ -0.72
CD46-206ENST00000360212 ZBTB9Q96C00 473 aa10.54□□□□□ -0.72
CD46-206ENST00000360212 TSPY26PQ9H489 355 aa10.54□□□□□ -0.72
CD46-206ENST00000360212 KDM5DQ9BY66 1539 aa10.54□□□□□ -0.72
CD46-206ENST00000360212 SMARCA5O60264 1052 aaPredicted RBP10.53□□□□□ -0.72
CD46-206ENST00000360212 GADD45BO75293 160 aaPredicted RBP10.53□□□□□ -0.72
CD46-206ENST00000360212 FBLN2P98095 1184 aa10.53□□□□□ -0.72
CD46-206ENST00000360212 CDCA8Q53HL2 280 aa10.53□□□□□ -0.72
CD46-206ENST00000360212 ZBTB40Q9NUA8 1239 aa10.53□□□□□ -0.72
CD46-206ENST00000360212 GPATCH8Q9UKJ3 1502 aaKnown RBP10.53□□□□□ -0.72
CD46-206ENST00000360212 MCM5P33992 734 aa10.53□□□□□ -0.72
CD46-206ENST00000360212 BMP2KLQ5H9B9 411 aa10.53□□□□□ -0.72
CD46-206ENST00000360212 PIK3C2GO75747 1445 aa10.52□□□□□ -0.72
CD46-206ENST00000360212 ADCY5O95622 1261 aa10.52□□□□□ -0.72
CD46-206ENST00000360212 SLC12A5Q9H2X9 1139 aa10.52□□□□□ -0.72
CD46-206ENST00000360212 GPRASP1Q5JY77 1395 aa10.52□□□□□ -0.73
CD46-206ENST00000360212 ATAD2Q6PL18 1390 aa10.52□□□□□ -0.73
CD46-206ENST00000360212 IBTKQ9P2D0 1353 aaPredicted RBP10.52□□□□□ -0.73
CD46-206ENST00000360212 HCLS1P14317 486 aaPredicted RBP10.52□□□□□ -0.73
CD46-206ENST00000360212 ASXL1Q8IXJ9 1541 aa10.52□□□□□ -0.73
CD46-206ENST00000360212 IRX5P78411 483 aaPredicted RBP10.52□□□□□ -0.73
CD46-206ENST00000360212 OTUD7AQ8TE49 926 aaPredicted RBP10.52□□□□□ -0.73
CD46-206ENST00000360212 HMGN5P82970 282 aaKnown RBP10.51□□□□□ -0.73
CD46-206ENST00000360212 WDR62O43379 1518 aa10.51□□□□□ -0.73
CD46-206ENST00000360212 WDR63Q8IWG1 891 aa10.51□□□□□ -0.73
CD46-206ENST00000360212 PIBF1Q8WXW3 757 aa10.51□□□□□ -0.73
CD46-206ENST00000360212 NUP153P49790 1475 aaKnown RBP10.51□□□□□ -0.73
CD46-206ENST00000360212 TRPM1Q7Z4N2 1603 aa10.5□□□□□ -0.73
CD46-206ENST00000360212 GSPT1P15170 499 aaKnown RBP10.5□□□□□ -0.73
CD46-206ENST00000360212 CFAP70Q5T0N1 1121 aa10.5□□□□□ -0.73
CD46-206ENST00000360212 PYCARDQ9ULZ3 195 aa10.5□□□□□ -0.73
CD46-206ENST00000360212 PLEKHD1A6NEE1 506 aa10.5□□□□□ -0.73
CD46-206ENST00000360212 CDC45O75419 566 aa10.5□□□□□ -0.73
CD46-206ENST00000360212 PRIMPOLQ96LW4 560 aa10.5□□□□□ -0.73
CD46-206ENST00000360212 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.5□□□□□ -0.73
CD46-206ENST00000360212 V9GYY5 206 aaPredicted RBP10.5□□□□□ -0.73
CD46-206ENST00000360212 NPHP1O15259 732 aa10.49□□□□□ -0.73
CD46-206ENST00000360212 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.49□□□□□ -0.73
CD46-206ENST00000360212 RABEP1Q15276 862 aa10.49□□□□□ -0.73
CD46-206ENST00000360212 CHMP3Q9Y3E7 222 aa10.49□□□□□ -0.73
CD46-206ENST00000360212 PLA2R1Q13018 1463 aa10.49□□□□□ -0.73
CD46-206ENST00000360212 CYP2E1P05181 493 aaPredicted RBP10.49□□□□□ -0.73
CD46-206ENST00000360212 NEK4P51957 841 aa10.49□□□□□ -0.73
CD46-206ENST00000360212 CHAF1AQ13111 956 aaPredicted RBP10.49□□□□□ -0.73
CD46-206ENST00000360212 ZNF592Q92610 1267 aa10.49□□□□□ -0.73
CD46-206ENST00000360212 LARP6Q9BRS8 491 aaKnown RBP10.49□□□□□ -0.73
CD46-206ENST00000360212 DNMBPQ6XZF7 1577 aa10.48□□□□□ -0.73
CD46-206ENST00000360212 LAMC3Q9Y6N6 1575 aa10.48□□□□□ -0.73
CD46-206ENST00000360212 HAP1P54257 671 aaPredicted RBP10.48□□□□□ -0.73
CD46-206ENST00000360212 CLEC17AQ6ZS10 378 aa10.48□□□□□ -0.73
CD46-206ENST00000360212 THUMPD2Q9BTF0 503 aaKnown RBP10.48□□□□□ -0.73
CD46-206ENST00000360212 ZMYM3Q14202 1370 aa10.48□□□□□ -0.73
CD46-206ENST00000360212 C16orf45Q96MC5 204 aaPredicted RBP10.48□□□□□ -0.73
CD46-206ENST00000360212 CEP170Q5SW79 1584 aa10.48□□□□□ -0.73
CD46-206ENST00000360212 ST18O60284 1047 aa10.47□□□□□ -0.73
CD46-206ENST00000360212 ABCC2Q92887 1545 aa10.47□□□□□ -0.73
CD46-206ENST00000360212 TSHZ3Q63HK5 1081 aa10.47□□□□□ -0.73
CD46-206ENST00000360212 SAMD1Q6SPF0 538 aaPredicted RBP10.47□□□□□ -0.73
CD46-206ENST00000360212 TROQ12816 1431 aaPredicted RBP10.47□□□□□ -0.73
CD46-206ENST00000360212 PLB1Q6P1J6 1458 aa10.47□□□□□ -0.73
CD46-206ENST00000360212 SIRT2Q8IXJ6 389 aa10.47□□□□□ -0.73
CD46-206ENST00000360212 ST7Q9NRC1 585 aa10.47□□□□□ -0.73
CD46-206ENST00000360212 PRDM15P57071 1507 aaPredicted RBP10.46□□□□□ -0.73
CD46-206ENST00000360212 SAFB2Q14151 953 aaKnown RBP eCLIP10.46□□□□□ -0.731e-6■■□□□ 13.1
CD46-206ENST00000360212 CCDC27Q2M243 656 aa10.46□□□□□ -0.73
CD46-206ENST00000360212 CHMP4CQ96CF2 233 aa10.46□□□□□ -0.73
CD46-206ENST00000360212 USP26Q9BXU7 913 aa10.46□□□□□ -0.73
CD46-206ENST00000360212 CLASP1Q7Z460 1538 aa10.46□□□□□ -0.74
CD46-206ENST00000360212 FKBP5Q13451 457 aaPredicted RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms