RNA–Protein interactions for RNA: ENST00000359446.9

LDLRAD4-201, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,486 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-201ENST00000359446 SURF6O75683 361 aaKnown RBP15.2■□□□□ 0.02
LDLRAD4-201ENST00000359446 TTC39AQ5SRH9 613 aa15.2■□□□□ 0.02
LDLRAD4-201ENST00000359446 ERCC4Q92889 916 aaPredicted RBP15.2■□□□□ 0.02
LDLRAD4-201ENST00000359446 STRN4Q9NRL3 753 aa15.2■□□□□ 0.02
LDLRAD4-201ENST00000359446 HIP1O00291 1037 aa15.19■□□□□ 0.02
LDLRAD4-201ENST00000359446 RNF214Q8ND24 703 aa15.19■□□□□ 0.02
LDLRAD4-201ENST00000359446 CCDC39Q9UFE4 941 aa15.19■□□□□ 0.02
LDLRAD4-201ENST00000359446 CEBPZQ03701 1054 aaKnown RBP15.19■□□□□ 0.02
LDLRAD4-201ENST00000359446 GNL3LQ9NVN8 582 aaKnown RBP15.19■□□□□ 0.02
LDLRAD4-201ENST00000359446 PDCP20941 246 aa15.19■□□□□ 0.02
LDLRAD4-201ENST00000359446 LETM1O95202 739 aaPredicted RBP15.18■□□□□ 0.02
LDLRAD4-201ENST00000359446 ARHGAP5Q13017 1502 aa15.18■□□□□ 0.02
LDLRAD4-201ENST00000359446 STK11IPQ8N1F8 1099 aa15.18■□□□□ 0.02
LDLRAD4-201ENST00000359446 ZRSR2Q15696 482 aaKnown RBP15.18■□□□□ 0.02
LDLRAD4-201ENST00000359446 OSCARQ8IYS5 282 aa15.18■□□□□ 0.02
LDLRAD4-201ENST00000359446 ESCO1Q5FWF5 840 aa15.18■□□□□ 0.02
LDLRAD4-201ENST00000359446 CADPSQ9ULU8 1353 aa15.17■□□□□ 0.02
LDLRAD4-201ENST00000359446 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.17■□□□□ 0.02
LDLRAD4-201ENST00000359446 GNAI3P08754 354 aa15.17■□□□□ 0.02
LDLRAD4-201ENST00000359446 SF3B2Q13435 895 aaKnown RBP15.17■□□□□ 0.02
LDLRAD4-201ENST00000359446 CCDC158Q5M9N0 1113 aa15.17■□□□□ 0.02
LDLRAD4-201ENST00000359446 CAVIN1Q6NZI2 390 aaKnown RBP15.16■□□□□ 0.02
LDLRAD4-201ENST00000359446 ZHX3Q9H4I2 956 aa15.16■□□□□ 0.02
LDLRAD4-201ENST00000359446 SEPT7Q16181 437 aaKnown RBP15.16■□□□□ 0.02
LDLRAD4-201ENST00000359446 ZNF396Q96N95 335 aaPredicted RBP15.16■□□□□ 0.02
LDLRAD4-201ENST00000359446 CWC15Q9P013 229 aaKnown RBP15.16■□□□□ 0.02
LDLRAD4-201ENST00000359446 KIF7Q2M1P5 1343 aa15.16■□□□□ 0.02
LDLRAD4-201ENST00000359446 GAS2L2Q8NHY3 880 aa15.16■□□□□ 0.02
LDLRAD4-201ENST00000359446 ERLIN2O94905 339 aa15.16■□□□□ 0.02
LDLRAD4-201ENST00000359446 ZNHIT6Q9NWK9 470 aaKnown RBP15.16■□□□□ 0.02
LDLRAD4-201ENST00000359446 CNTLNQ9NXG0 1405 aa15.16■□□□□ 0.02
LDLRAD4-201ENST00000359446 PDCL3Q9H2J4 239 aa15.16■□□□□ 0.02
LDLRAD4-201ENST00000359446 MYOM3Q5VTT5 1437 aa15.16■□□□□ 0.02
LDLRAD4-201ENST00000359446 ERC1Q8IUD2 1116 aa15.15■□□□□ 0.02
LDLRAD4-201ENST00000359446 FANCD2Q9BXW9 1451 aa15.15■□□□□ 0.02
LDLRAD4-201ENST00000359446 RBM5P52756 815 aaKnown RBP eCLIP15.15■□□□□ 0.02
LDLRAD4-201ENST00000359446 AAMPQ13685 434 aa15.15■□□□□ 0.02
LDLRAD4-201ENST00000359446 SMARCA4P51532 1647 aa15.15■□□□□ 0.02
LDLRAD4-201ENST00000359446 NEK4P51957 841 aa15.15■□□□□ 0.02
LDLRAD4-201ENST00000359446 PLEKHO1Q53GL0 409 aaPredicted RBP15.15■□□□□ 0.02
LDLRAD4-201ENST00000359446 TMEM132EQ6IEE7 984 aa15.15■□□□□ 0.02
LDLRAD4-201ENST00000359446 RRBP1Q9P2E9 1410 aaKnown RBP15.14■□□□□ 0.01
LDLRAD4-201ENST00000359446 CCP110O43303 1012 aa15.14■□□□□ 0.01
LDLRAD4-201ENST00000359446 AXDND1Q5T1B0 1012 aaPredicted RBP15.14■□□□□ 0.01
LDLRAD4-201ENST00000359446 MTHFSP49914 203 aa15.14■□□□□ 0.01
LDLRAD4-201ENST00000359446 STIM1Q13586 685 aa15.14■□□□□ 0.01
LDLRAD4-201ENST00000359446 ANKRD62A6NC57 917 aa15.14■□□□□ 0.01
LDLRAD4-201ENST00000359446 ZNF428Q96B54 188 aa15.14■□□□□ 0.01
LDLRAD4-201ENST00000359446 STK38Q15208 465 aa15.14■□□□□ 0.01
LDLRAD4-201ENST00000359446 GOLGA6L10A6NI86 522 aa15.13■□□□□ 0.01
LDLRAD4-201ENST00000359446 GNAI2P04899 355 aa15.13■□□□□ 0.01
LDLRAD4-201ENST00000359446 DEF6Q9H4E7 631 aa15.13■□□□□ 0.01
LDLRAD4-201ENST00000359446 LUC7LQ9NQ29 371 aaKnown RBP15.13■□□□□ 0.01
LDLRAD4-201ENST00000359446 PIP4K2AP48426 406 aaPredicted RBP15.13■□□□□ 0.01
LDLRAD4-201ENST00000359446 FIBPO43427 364 aa15.13■□□□□ 0.01
LDLRAD4-201ENST00000359446 MCM2P49736 904 aa15.12■□□□□ 0.01
LDLRAD4-201ENST00000359446 JMYQ8N9B5 988 aa15.12■□□□□ 0.01
LDLRAD4-201ENST00000359446 TRIM22Q8IYM9 498 aa15.12■□□□□ 0.01
LDLRAD4-201ENST00000359446 SPC24Q8NBT2 197 aa15.12■□□□□ 0.01
LDLRAD4-201ENST00000359446 TSPY26PQ9H489 355 aa15.12■□□□□ 0.01
LDLRAD4-201ENST00000359446 SERPINC1P01008 464 aa15.12■□□□□ 0.01
LDLRAD4-201ENST00000359446 C1orf115Q9H7X2 142 aa15.12■□□□□ 0.01
LDLRAD4-201ENST00000359446 CCDC69A6NI79 296 aa15.12■□□□□ 0.01
LDLRAD4-201ENST00000359446 SIL1Q9H173 461 aa15.12■□□□□ 0.01
LDLRAD4-201ENST00000359446 ENOX2Q16206 610 aaKnown RBP15.11■□□□□ 0.01
LDLRAD4-201ENST00000359446 NACAP1Q9BZK3 213 aa15.11■□□□□ 0.01
LDLRAD4-201ENST00000359446 TANGO6Q9C0B7 1094 aa15.11■□□□□ 0.01
LDLRAD4-201ENST00000359446 CT47B1P0C2W7 299 aaPredicted RBP15.11■□□□□ 0.01
LDLRAD4-201ENST00000359446 TSPYL1Q9H0U9 437 aa15.11■□□□□ 0.01
LDLRAD4-201ENST00000359446 MPHOSPH8Q99549 860 aa15.11■□□□□ 0.01
LDLRAD4-201ENST00000359446 CABP4P57796 275 aa15.11■□□□□ 0.01
LDLRAD4-201ENST00000359446 MBD3O95983 291 aa15.11■□□□□ 0.01
LDLRAD4-201ENST00000359446 STK3Q13188 491 aa15.11■□□□□ 0.01
LDLRAD4-201ENST00000359446 FYCO1Q9BQS8 1478 aa15.1■□□□□ 0.01
LDLRAD4-201ENST00000359446 FANCIQ9NVI1 1328 aa15.1■□□□□ 0.01
LDLRAD4-201ENST00000359446 TATP17735 454 aaPredicted RBP15.1■□□□□ 0.01
LDLRAD4-201ENST00000359446 MATR3P43243 847 aaKnown RBP eCLIP15.1■□□□□ 0.012e-6■■□□□ 13.4
LDLRAD4-201ENST00000359446 ANKRD18AQ8IVF6 992 aa15.1■□□□□ 0.01
LDLRAD4-201ENST00000359446 MYL6BP14649 208 aa15.1■□□□□ 0.01
LDLRAD4-201ENST00000359446 GAPVD1Q14C86 1478 aa15.1■□□□□ 0.01
LDLRAD4-201ENST00000359446 PRPF40AO75400 957 aaKnown RBP15.1■□□□□ 0.01
LDLRAD4-201ENST00000359446 MRE11P49959 708 aa15.1■□□□□ 0.01
LDLRAD4-201ENST00000359446 PPFIBP1Q86W92 1011 aa15.09■□□□□ 0.01
LDLRAD4-201ENST00000359446 DDX54Q8TDD1 881 aaKnown RBP15.09■□□□□ 0.01
LDLRAD4-201ENST00000359446 ME1P48163 572 aa15.09■□□□□ 0.01
LDLRAD4-201ENST00000359446 NFKBIBQ15653 356 aa15.09■□□□□ 0.01
LDLRAD4-201ENST00000359446 CCDC181Q5TID7 509 aa15.09■□□□□ 0.01
LDLRAD4-201ENST00000359446 TRAK2O60296 914 aa15.09■□□□□ 0.01
LDLRAD4-201ENST00000359446 LEKR1Q6ZMV7 388 aa15.09■□□□□ 0.01
LDLRAD4-201ENST00000359446 NUP133Q8WUM0 1156 aa15.09■□□□□ 0.01
LDLRAD4-201ENST00000359446 PLCD4Q9BRC7 762 aa15.09■□□□□ 0.01
LDLRAD4-201ENST00000359446 CCDC57Q2TAC2 916 aa15.08■□□□□ 0.01
LDLRAD4-201ENST00000359446 TOM1L2Q6ZVM7 507 aa15.08■□□□□ 0.01
LDLRAD4-201ENST00000359446 PRKAR2BP31323 418 aa15.08■□□□□ 0.01
LDLRAD4-201ENST00000359446 ANKRD1Q15327 319 aa15.08■□□□□ 0.01
LDLRAD4-201ENST00000359446 FKBP4Q02790 459 aaKnown RBP eCLIP15.08■□□□□ 0
LDLRAD4-201ENST00000359446 HDGFL1Q5TGJ6 251 aa15.08■□□□□ 0
LDLRAD4-201ENST00000359446 NUTM2BA6NNL0 878 aaPredicted RBP15.08■□□□□ 0
LDLRAD4-201ENST00000359446 NUTM2EB1AL46 878 aaPredicted RBP15.08■□□□□ 0
LDLRAD4-201ENST00000359446 NUTM2AQ8IVF1 878 aaPredicted RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms