RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 LRPPRCP42704 1394 aaKnown RBP6.8□□□□□ -1.32
ATXN3-202ENST00000359366 SETD1AO15047 1707 aaKnown RBP6.8□□□□□ -1.32
ATXN3-202ENST00000359366 MORC1Q86VD1 984 aa6.8□□□□□ -1.32
ATXN3-202ENST00000359366 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.8□□□□□ -1.32
ATXN3-202ENST00000359366 RBM33Q96EV2 1170 aaKnown RBP6.8□□□□□ -1.32
ATXN3-202ENST00000359366 CDCA7LQ96GN5 454 aa6.8□□□□□ -1.32
ATXN3-202ENST00000359366 GGNBP2Q9H3C7 697 aa6.8□□□□□ -1.32
ATXN3-202ENST00000359366 METRNQ9UJH8 293 aa6.8□□□□□ -1.32
ATXN3-202ENST00000359366 RIMS1Q86UR5 1692 aaKnown RBP6.8□□□□□ -1.32
ATXN3-202ENST00000359366 A0A1W2PP64 1363 aa6.8□□□□□ -1.32
ATXN3-202ENST00000359366 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.79□□□□□ -1.32
ATXN3-202ENST00000359366 PODXL2Q9NZ53 605 aa6.79□□□□□ -1.32
ATXN3-202ENST00000359366 ZNF692Q9BU19 519 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-202ENST00000359366 ROBO2Q9HCK4 1378 aa6.79□□□□□ -1.32
ATXN3-202ENST00000359366 NEFLP07196 543 aa6.78□□□□□ -1.32
ATXN3-202ENST00000359366 WDR43Q15061 677 aaKnown RBP eCLIP6.78□□□□□ -1.32
ATXN3-202ENST00000359366 SSUH2Q9Y2M2 353 aa6.78□□□□□ -1.32
ATXN3-202ENST00000359366 SPNS2Q8IVW8 549 aa6.78□□□□□ -1.32
ATXN3-202ENST00000359366 SLC39A7Q92504 469 aa6.78□□□□□ -1.32
ATXN3-202ENST00000359366 EID1Q9Y6B2 187 aa6.78□□□□□ -1.32
ATXN3-202ENST00000359366 ADAMTS13Q76LX8 1427 aa6.78□□□□□ -1.32
ATXN3-202ENST00000359366 POTEJP0CG39 1038 aa6.77□□□□□ -1.33
ATXN3-202ENST00000359366 C7P10643 843 aa6.77□□□□□ -1.33
ATXN3-202ENST00000359366 CGNL1Q0VF96 1302 aa6.77□□□□□ -1.33
ATXN3-202ENST00000359366 MTHFSP49914 203 aa6.77□□□□□ -1.33
ATXN3-202ENST00000359366 ANKRD36BQ8N2N9 1353 aa6.77□□□□□ -1.33
ATXN3-202ENST00000359366 CD163L1Q9NR16 1453 aa6.77□□□□□ -1.33
ATXN3-202ENST00000359366 PTPRUQ92729 1446 aa6.76□□□□□ -1.33
ATXN3-202ENST00000359366 HDGFP51858 240 aaKnown RBP6.76□□□□□ -1.33
ATXN3-202ENST00000359366 ILDR1Q86SU0 546 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-202ENST00000359366 ABCC11Q96J66 1382 aa6.76□□□□□ -1.33
ATXN3-202ENST00000359366 NLRP1Q9C000 1473 aa6.76□□□□□ -1.33
ATXN3-202ENST00000359366 WASLO00401 505 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-202ENST00000359366 FYB1O15117 783 aa6.76□□□□□ -1.33
ATXN3-202ENST00000359366 PPM1GO15355 546 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-202ENST00000359366 NEUROD2Q15784 382 aa6.76□□□□□ -1.33
ATXN3-202ENST00000359366 AMOTL2Q9Y2J4 779 aa6.76□□□□□ -1.33
ATXN3-202ENST00000359366 THEMISQ8N1K5 641 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-202ENST00000359366 NUDT16Q96DE0 195 aaKnown RBP6.75□□□□□ -1.33
ATXN3-202ENST00000359366 NUDCQ9Y266 331 aa6.75□□□□□ -1.33
ATXN3-202ENST00000359366 RRP7AQ9Y3A4 280 aaKnown RBP6.75□□□□□ -1.33
ATXN3-202ENST00000359366 PRR36Q9H6K5 1346 aa6.75□□□□□ -1.33
ATXN3-202ENST00000359366 NPC1L1Q9UHC9 1359 aa6.75□□□□□ -1.33
ATXN3-202ENST00000359366 PLEKHG1Q9ULL1 1385 aa6.75□□□□□ -1.33
ATXN3-202ENST00000359366 APAF1O14727 1248 aa6.75□□□□□ -1.33
ATXN3-202ENST00000359366 PKNOX2Q96KN3 472 aa6.75□□□□□ -1.33
ATXN3-202ENST00000359366 TERF2IPQ9NYB0 399 aa6.75□□□□□ -1.33
ATXN3-202ENST00000359366 ATAD2Q6PL18 1390 aa6.74□□□□□ -1.33
ATXN3-202ENST00000359366 HDGFL2Q7Z4V5 671 aaPredicted RBP6.74□□□□□ -1.33
ATXN3-202ENST00000359366 NME9Q86XW9 330 aa6.74□□□□□ -1.33
ATXN3-202ENST00000359366 PPIP5K1Q6PFW1 1433 aa6.74□□□□□ -1.33
ATXN3-202ENST00000359366 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.74□□□□□ -1.33
ATXN3-202ENST00000359366 SOX12O15370 315 aa6.74□□□□□ -1.33
ATXN3-202ENST00000359366 KCNA6P17658 529 aa6.74□□□□□ -1.33
ATXN3-202ENST00000359366 PMFBP1Q8TBY8 1022 aa6.74□□□□□ -1.33
ATXN3-202ENST00000359366 BLMP54132 1417 aaPredicted RBP6.74□□□□□ -1.33
ATXN3-202ENST00000359366 SMG6Q86US8 1419 aaKnown RBP6.74□□□□□ -1.33
ATXN3-202ENST00000359366 DLC1Q96QB1 1528 aa6.74□□□□□ -1.33
ATXN3-202ENST00000359366 CEP170BQ9Y4F5 1589 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-202ENST00000359366 U2SURPO15042 1029 aaKnown RBP6.72□□□□□ -1.33
ATXN3-202ENST00000359366 PLIN1O60240 522 aa6.72□□□□□ -1.33
ATXN3-202ENST00000359366 PLEKHG5O94827 1062 aa6.72□□□□□ -1.33
ATXN3-202ENST00000359366 PUS7Q96PZ0 661 aaKnown RBP6.72□□□□□ -1.33
ATXN3-202ENST00000359366 ARHGAP23Q9P227 1491 aa6.72□□□□□ -1.33
ATXN3-202ENST00000359366 ANO8Q9HCE9 1232 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-202ENST00000359366 SLIT1O75093 1534 aa6.72□□□□□ -1.33
ATXN3-202ENST00000359366 ADAMTSL3P82987 1691 aa6.72□□□□□ -1.33
ATXN3-202ENST00000359366 MED14O60244 1454 aa6.72□□□□□ -1.33
ATXN3-202ENST00000359366 CPS1P31327 1500 aa6.71□□□□□ -1.33
ATXN3-202ENST00000359366 U2AF1L5P0DN76 240 aaPredicted RBP6.71□□□□□ -1.33
ATXN3-202ENST00000359366 U2AF1Q01081 240 aaKnown RBP eCLIP6.71□□□□□ -1.33
ATXN3-202ENST00000359366 RRS1Q15050 365 aaKnown RBP6.71□□□□□ -1.33
ATXN3-202ENST00000359366 CCDC61Q9Y6R9 512 aa6.71□□□□□ -1.33
ATXN3-202ENST00000359366 TECPR2O15040 1411 aa6.71□□□□□ -1.33
ATXN3-202ENST00000359366 RGPD8O14715 1765 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-202ENST00000359366 B4GALNT3Q6L9W6 998 aa6.71□□□□□ -1.34
ATXN3-202ENST00000359366 TBX22Q9Y458 520 aa6.71□□□□□ -1.34
ATXN3-202ENST00000359366 EMILIN1Q9Y6C2 1016 aa6.71□□□□□ -1.34
ATXN3-202ENST00000359366 SHPRHQ149N8 1683 aa6.71□□□□□ -1.34
ATXN3-202ENST00000359366 KNDC1Q76NI1 1749 aa6.71□□□□□ -1.34
ATXN3-202ENST00000359366 FAM135BQ49AJ0 1406 aa6.71□□□□□ -1.34
ATXN3-202ENST00000359366 ATP7BP35670 1465 aa6.71□□□□□ -1.34
ATXN3-202ENST00000359366 NUTM2GQ5VZR2 741 aa6.7□□□□□ -1.34
ATXN3-202ENST00000359366 ANKLE2Q86XL3 938 aa6.7□□□□□ -1.34
ATXN3-202ENST00000359366 ACEP12821 1306 aa6.7□□□□□ -1.34
ATXN3-202ENST00000359366 USP32Q8NFA0 1604 aa6.7□□□□□ -1.34
ATXN3-202ENST00000359366 RCAN3Q9UKA8 241 aa6.7□□□□□ -1.34
ATXN3-202ENST00000359366 POLR3AO14802 1390 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-202ENST00000359366 NINLQ9Y2I6 1382 aa6.7□□□□□ -1.34
ATXN3-202ENST00000359366 HSPA2P54652 639 aa6.69□□□□□ -1.34
ATXN3-202ENST00000359366 CFAP53Q96M91 514 aa6.69□□□□□ -1.34
ATXN3-202ENST00000359366 NKTRP30414 1462 aaKnown RBP6.69□□□□□ -1.34
ATXN3-202ENST00000359366 KIF20BQ96Q89 1820 aa6.69□□□□□ -1.34
ATXN3-202ENST00000359366 SETD1BQ9UPS6 1966 aaKnown RBP6.69□□□□□ -1.34
ATXN3-202ENST00000359366 TCP11L2Q8N4U5 519 aa6.69□□□□□ -1.34
ATXN3-202ENST00000359366 POLKQ9UBT6 870 aa6.69□□□□□ -1.34
ATXN3-202ENST00000359366 MAP2P11137 1827 aaKnown RBP6.69□□□□□ -1.34
ATXN3-202ENST00000359366 CPSF1Q10570 1443 aaKnown RBP6.69□□□□□ -1.34
ATXN3-202ENST00000359366 HMOX1P09601 288 aa6.68□□□□□ -1.34
ATXN3-202ENST00000359366 NSD2O96028 1365 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms