RNA–Protein interactions for RNA: ENST00000359175.8

SPTSSB-201, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSB, Length 3,103 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-201ENST00000359175 PDCL2Q8N4E4 241 aa16.36■□□□□ 0.21
SPTSSB-201ENST00000359175 SYNJ2O15056 1496 aa16.36■□□□□ 0.21
SPTSSB-201ENST00000359175 CDC42BPAQ5VT25 1732 aa16.36■□□□□ 0.21
SPTSSB-201ENST00000359175 BCL2L12Q9HB09 334 aa16.36■□□□□ 0.21
SPTSSB-201ENST00000359175 SPDYE4A6NLX3 237 aa16.35■□□□□ 0.21
SPTSSB-201ENST00000359175 PTMAP06454 111 aaKnown RBP16.35■□□□□ 0.21
SPTSSB-201ENST00000359175 NUCB1Q02818 461 aa16.35■□□□□ 0.21
SPTSSB-201ENST00000359175 NOLC1Q14978 699 aaKnown RBP eCLIP16.35■□□□□ 0.21
SPTSSB-201ENST00000359175 IRX5P78411 483 aaPredicted RBP16.35■□□□□ 0.21
SPTSSB-201ENST00000359175 SLC20A2Q08357 652 aa16.35■□□□□ 0.21
SPTSSB-201ENST00000359175 RAPGEF6Q8TEU7 1601 aa16.35■□□□□ 0.21
SPTSSB-201ENST00000359175 FEZ1Q99689 392 aa16.34■□□□□ 0.21
SPTSSB-201ENST00000359175 RBM42Q9BTD8 480 aaKnown RBP16.34■□□□□ 0.21
SPTSSB-201ENST00000359175 RBM27Q9P2N5 1060 aaKnown RBP16.34■□□□□ 0.21
SPTSSB-201ENST00000359175 ZNF777Q9ULD5 760 aaPredicted RBP16.34■□□□□ 0.21
SPTSSB-201ENST00000359175 POLR3AO14802 1390 aaPredicted RBP16.34■□□□□ 0.21
SPTSSB-201ENST00000359175 IQGAP1P46940 1657 aa16.34■□□□□ 0.21
SPTSSB-201ENST00000359175 CDK11BP21127 795 aaKnown RBP16.34■□□□□ 0.21
SPTSSB-201ENST00000359175 TMEM63CQ9P1W3 806 aa16.34■□□□□ 0.21
SPTSSB-201ENST00000359175 IQSEC2Q5JU85 1478 aa16.34■□□□□ 0.21
SPTSSB-201ENST00000359175 CFAP74Q9C0B2 1584 aa16.34■□□□□ 0.21
SPTSSB-201ENST00000359175 DDX19BQ9UMR2 479 aa16.34■□□□□ 0.21
SPTSSB-201ENST00000359175 PRG4Q92954 1404 aaPredicted RBP16.34■□□□□ 0.21
SPTSSB-201ENST00000359175 SYCE3A1L190 88 aa16.33■□□□□ 0.21
SPTSSB-201ENST00000359175 PRPF40AO75400 957 aaKnown RBP16.33■□□□□ 0.21
SPTSSB-201ENST00000359175 ANKRD7Q92527 254 aa16.33■□□□□ 0.21
SPTSSB-201ENST00000359175 PLA2R1Q13018 1463 aa16.33■□□□□ 0.2
SPTSSB-201ENST00000359175 IGSF3O75054 1194 aa16.33■□□□□ 0.2
SPTSSB-201ENST00000359175 FKBP5Q13451 457 aaPredicted RBP16.33■□□□□ 0.2
SPTSSB-201ENST00000359175 SPTLC3Q9NUV7 552 aa16.33■□□□□ 0.2
SPTSSB-201ENST00000359175 CWC22Q9HCG8 908 aaKnown RBP16.32■□□□□ 0.2
SPTSSB-201ENST00000359175 CCDC27Q2M243 656 aa16.31■□□□□ 0.2
SPTSSB-201ENST00000359175 RUNDC1Q96C34 613 aa16.31■□□□□ 0.2
SPTSSB-201ENST00000359175 GABPB1Q06547 395 aaPredicted RBP16.3■□□□□ 0.2
SPTSSB-201ENST00000359175 ZNF771Q7L3S4 317 aaPredicted RBP16.3■□□□□ 0.2
SPTSSB-201ENST00000359175 SHPRHQ149N8 1683 aa16.3■□□□□ 0.2
SPTSSB-201ENST00000359175 FAM177BA6PVY3 158 aa16.3■□□□□ 0.2
SPTSSB-201ENST00000359175 OGFRQ9NZT2 677 aa16.3■□□□□ 0.2
SPTSSB-201ENST00000359175 CT47B1P0C2W7 299 aaPredicted RBP16.3■□□□□ 0.2
SPTSSB-201ENST00000359175 U2AF2P26368 475 aaKnown RBP eCLIP16.3■□□□□ 0.2
SPTSSB-201ENST00000359175 CHD1LQ86WJ1 897 aa16.3■□□□□ 0.2
SPTSSB-201ENST00000359175 RABEP1Q15276 862 aa16.29■□□□□ 0.2
SPTSSB-201ENST00000359175 MBD3O95983 291 aa16.29■□□□□ 0.2
SPTSSB-201ENST00000359175 NCBP3Q53F19 620 aaKnown RBP16.29■□□□□ 0.2
SPTSSB-201ENST00000359175 TBC1D9Q6ZT07 1266 aa16.28■□□□□ 0.2
SPTSSB-201ENST00000359175 RNF214Q8ND24 703 aa16.28■□□□□ 0.2
SPTSSB-201ENST00000359175 PKP1Q13835 747 aa16.28■□□□□ 0.2
SPTSSB-201ENST00000359175 TCP11L2Q8N4U5 519 aa16.28■□□□□ 0.2
SPTSSB-201ENST00000359175 LNPKQ9C0E8 428 aa16.28■□□□□ 0.2
SPTSSB-201ENST00000359175 TSPY26PQ9H489 355 aa16.28■□□□□ 0.2
SPTSSB-201ENST00000359175 CTIFO43310 598 aaKnown RBP16.27■□□□□ 0.2
SPTSSB-201ENST00000359175 NEUROD2Q15784 382 aa16.27■□□□□ 0.2
SPTSSB-201ENST00000359175 DIAPH3Q9NSV4 1193 aa16.27■□□□□ 0.2
SPTSSB-201ENST00000359175 TRIM27P14373 513 aa16.27■□□□□ 0.19
SPTSSB-201ENST00000359175 ZBTB40Q9NUA8 1239 aa16.27■□□□□ 0.19
SPTSSB-201ENST00000359175 KIAA0556O60303 1618 aa16.27■□□□□ 0.19
SPTSSB-201ENST00000359175 UVSSAQ2YD98 709 aa16.26■□□□□ 0.19
SPTSSB-201ENST00000359175 DNAJC2Q99543 621 aaKnown RBP16.26■□□□□ 0.19
SPTSSB-201ENST00000359175 URB2Q14146 1524 aaKnown RBP16.26■□□□□ 0.19
SPTSSB-201ENST00000359175 TSPY4P0CV99 314 aa16.26■□□□□ 0.19
SPTSSB-201ENST00000359175 TSPY10P0CW01 314 aa16.26■□□□□ 0.19
SPTSSB-201ENST00000359175 KCNJ4P48050 445 aa16.26■□□□□ 0.19
SPTSSB-201ENST00000359175 ITPRIPQ8IWB1 547 aa16.26■□□□□ 0.19
SPTSSB-201ENST00000359175 RRP7AQ9Y3A4 280 aaKnown RBP16.26■□□□□ 0.19
SPTSSB-201ENST00000359175 KDM5AP29375 1690 aaKnown RBP16.26■□□□□ 0.19
SPTSSB-201ENST00000359175 NSFL1CQ9UNZ2 370 aaKnown RBP16.25■□□□□ 0.19
SPTSSB-201ENST00000359175 REREQ9P2R6 1566 aa16.25■□□□□ 0.19
SPTSSB-201ENST00000359175 CHRM1P11229 460 aaPredicted RBP16.25■□□□□ 0.19
SPTSSB-201ENST00000359175 ZDHHC9Q9Y397 364 aa16.25■□□□□ 0.19
SPTSSB-201ENST00000359175 ZBTB7CA1YPR0 619 aa16.25■□□□□ 0.19
SPTSSB-201ENST00000359175 SLFN14P0C7P3 912 aa16.25■□□□□ 0.19
SPTSSB-201ENST00000359175 CEP152O94986 1710 aa16.24■□□□□ 0.19
SPTSSB-201ENST00000359175 ATF7IPQ6VMQ6 1270 aa16.24■□□□□ 0.19
SPTSSB-201ENST00000359175 FAM184AQ8NB25 1140 aa16.24■□□□□ 0.19
SPTSSB-201ENST00000359175 TEX2Q8IWB9 1127 aa16.23■□□□□ 0.19
SPTSSB-201ENST00000359175 CCDC66A2RUB6 948 aa16.23■□□□□ 0.19
SPTSSB-201ENST00000359175 DISP1Q96F81 1524 aa16.23■□□□□ 0.19
SPTSSB-201ENST00000359175 SCAF11Q99590 1463 aaKnown RBP16.23■□□□□ 0.19
SPTSSB-201ENST00000359175 ATP10AO60312 1499 aa16.23■□□□□ 0.19
SPTSSB-201ENST00000359175 YEATS2Q9ULM3 1422 aa16.23■□□□□ 0.19
SPTSSB-201ENST00000359175 ZFP91Q96JP5 570 aaPredicted RBP16.23■□□□□ 0.19
SPTSSB-201ENST00000359175 RIOK3O14730 519 aaKnown RBP16.22■□□□□ 0.19
SPTSSB-201ENST00000359175 CHAF1AQ13111 956 aaPredicted RBP16.22■□□□□ 0.19
SPTSSB-201ENST00000359175 CLTCL1P53675 1640 aa16.22■□□□□ 0.19
SPTSSB-201ENST00000359175 ARHGEF5Q12774 1597 aa16.22■□□□□ 0.19
SPTSSB-201ENST00000359175 SYCP1Q15431 976 aa16.22■□□□□ 0.19
SPTSSB-201ENST00000359175 SMC4Q9NTJ3 1288 aa16.22■□□□□ 0.19
SPTSSB-201ENST00000359175 MADDQ8WXG6 1647 aa16.22■□□□□ 0.19
SPTSSB-201ENST00000359175 UNC13BO14795 1591 aa16.22■□□□□ 0.19
SPTSSB-201ENST00000359175 SYAP1Q96A49 352 aaPredicted RBP16.21■□□□□ 0.19
SPTSSB-201ENST00000359175 TULP2O00295 520 aa16.21■□□□□ 0.19
SPTSSB-201ENST00000359175 CDC45O75419 566 aa16.21■□□□□ 0.19
SPTSSB-201ENST00000359175 TTC12Q9H892 705 aaPredicted RBP16.21■□□□□ 0.19
SPTSSB-201ENST00000359175 C17orf53Q8N3J3 647 aaPredicted RBP16.21■□□□□ 0.18
SPTSSB-201ENST00000359175 IRX3P78415 501 aaPredicted RBP16.2■□□□□ 0.18
SPTSSB-201ENST00000359175 CFAP44Q96MT7 982 aa16.2■□□□□ 0.18
SPTSSB-201ENST00000359175 TMEM57Q8N5G2 664 aa16.19■□□□□ 0.18
SPTSSB-201ENST00000359175 GCC1Q96CN9 775 aa16.19■□□□□ 0.18
SPTSSB-201ENST00000359175 TIGD1Q96MW7 591 aa16.19■□□□□ 0.18
SPTSSB-201ENST00000359175 CTNNA3Q9UI47 895 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms