RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 SETQ01105 290 aaPredicted RBP15.6■□□□□ 0.09
NLRC3-202ENST00000359128 IFT140Q96RY7 1462 aa15.6■□□□□ 0.09
NLRC3-202ENST00000359128 SURF6O75683 361 aaKnown RBP15.6■□□□□ 0.09
NLRC3-202ENST00000359128 LNPKQ9C0E8 428 aa15.6■□□□□ 0.09
NLRC3-202ENST00000359128 MPHOSPH8Q99549 860 aa15.6■□□□□ 0.09
NLRC3-202ENST00000359128 KRT18P05783 430 aaKnown RBP15.59■□□□□ 0.09
NLRC3-202ENST00000359128 OFD1O75665 1012 aa15.59■□□□□ 0.09
NLRC3-202ENST00000359128 CFAP70Q5T0N1 1121 aa15.59■□□□□ 0.09
NLRC3-202ENST00000359128 ZNF530Q6P9A1 599 aaPredicted RBP15.59■□□□□ 0.09
NLRC3-202ENST00000359128 RTEL1-TNFRSF6BF6WH68 1400 aa15.59■□□□□ 0.09
NLRC3-202ENST00000359128 MYL6BP14649 208 aa15.59■□□□□ 0.09
NLRC3-202ENST00000359128 PDE4AP27815 886 aa15.59■□□□□ 0.09
NLRC3-202ENST00000359128 HOMER1Q86YM7 354 aa15.59■□□□□ 0.09
NLRC3-202ENST00000359128 PRKAR2BP31323 418 aa15.58■□□□□ 0.09
NLRC3-202ENST00000359128 NCOA2Q15596 1464 aa15.58■□□□□ 0.08
NLRC3-202ENST00000359128 MPHOSPH10O00566 681 aaKnown RBP15.58■□□□□ 0.08
NLRC3-202ENST00000359128 BICDL1Q6ZP65 573 aa15.58■□□□□ 0.08
NLRC3-202ENST00000359128 ZSCAN29Q8IWY8 852 aaPredicted RBP15.57■□□□□ 0.08
NLRC3-202ENST00000359128 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.57■□□□□ 0.08
NLRC3-202ENST00000359128 TXLNAP40222 546 aa15.57■□□□□ 0.08
NLRC3-202ENST00000359128 SCAPERQ9BY12 1400 aa15.57■□□□□ 0.08
NLRC3-202ENST00000359128 PATL2C9JE40 543 aaKnown RBP15.57■□□□□ 0.08
NLRC3-202ENST00000359128 CDC45O75419 566 aa15.57■□□□□ 0.08
NLRC3-202ENST00000359128 RDXP35241 583 aaKnown RBP15.56■□□□□ 0.08
NLRC3-202ENST00000359128 STK11IPQ8N1F8 1099 aa15.56■□□□□ 0.08
NLRC3-202ENST00000359128 NACAP1Q9BZK3 213 aa15.56■□□□□ 0.08
NLRC3-202ENST00000359128 CCDC57Q2TAC2 916 aa15.56■□□□□ 0.08
NLRC3-202ENST00000359128 HDGFL1Q5TGJ6 251 aa15.55■□□□□ 0.08
NLRC3-202ENST00000359128 XPCQ01831 940 aaPredicted RBP15.55■□□□□ 0.08
NLRC3-202ENST00000359128 CASKIN1Q8WXD9 1431 aa15.55■□□□□ 0.08
NLRC3-202ENST00000359128 SYCP1Q15431 976 aa15.55■□□□□ 0.08
NLRC3-202ENST00000359128 GNAI2P04899 355 aa15.55■□□□□ 0.08
NLRC3-202ENST00000359128 SLC26A8Q96RN1 970 aa15.55■□□□□ 0.08
NLRC3-202ENST00000359128 SULT6B1Q6IMI4 303 aa15.54■□□□□ 0.08
NLRC3-202ENST00000359128 NAT10Q9H0A0 1025 aaKnown RBP15.54■□□□□ 0.08
NLRC3-202ENST00000359128 KIF21BO75037 1637 aa15.54■□□□□ 0.08
NLRC3-202ENST00000359128 TWISTNBQ3B726 338 aaPredicted RBP15.54■□□□□ 0.08
NLRC3-202ENST00000359128 CABP1Q9NZU7 370 aa15.54■□□□□ 0.08
NLRC3-202ENST00000359128 ZSCAN25Q6NSZ9 544 aa15.54■□□□□ 0.08
NLRC3-202ENST00000359128 SLC52A1Q9NWF4 448 aa15.54■□□□□ 0.08
NLRC3-202ENST00000359128 MAGEC2Q9UBF1 373 aaPredicted RBP15.54■□□□□ 0.08
NLRC3-202ENST00000359128 LRRC9Q6ZRR7 1453 aa15.53■□□□□ 0.08
NLRC3-202ENST00000359128 BTBD11A6QL63 1104 aa15.53■□□□□ 0.08
NLRC3-202ENST00000359128 CCDC173Q0VFZ6 552 aa15.53■□□□□ 0.08
NLRC3-202ENST00000359128 CCDC69A6NI79 296 aa15.53■□□□□ 0.08
NLRC3-202ENST00000359128 NUCB2P80303 420 aa15.53■□□□□ 0.08
NLRC3-202ENST00000359128 PANK1Q8TE04 598 aa15.53■□□□□ 0.08
NLRC3-202ENST00000359128 RUFY1Q96T51 708 aa15.53■□□□□ 0.08
NLRC3-202ENST00000359128 SNAPC4Q5SXM2 1469 aa15.53■□□□□ 0.08
NLRC3-202ENST00000359128 SIL1Q9H173 461 aa15.53■□□□□ 0.08
NLRC3-202ENST00000359128 ATP2B1P20020 1258 aa15.52■□□□□ 0.08
NLRC3-202ENST00000359128 AAMPQ13685 434 aa15.52■□□□□ 0.08
NLRC3-202ENST00000359128 ZNF428Q96B54 188 aa15.52■□□□□ 0.08
NLRC3-202ENST00000359128 TMOD2Q9NZR1 351 aa15.52■□□□□ 0.08
NLRC3-202ENST00000359128 PDILTQ8N807 584 aa15.52■□□□□ 0.08
NLRC3-202ENST00000359128 SOGA3Q5TF21 947 aa15.52■□□□□ 0.07
NLRC3-202ENST00000359128 ZPR1O75312 459 aa15.51■□□□□ 0.07
NLRC3-202ENST00000359128 CCDC7Q96M83 1385 aa15.51■□□□□ 0.07
NLRC3-202ENST00000359128 C9orf84Q5VXU9 1444 aa15.51■□□□□ 0.07
NLRC3-202ENST00000359128 RAPGEF3O95398 923 aa15.51■□□□□ 0.07
NLRC3-202ENST00000359128 IGHMBP2P38935 993 aaKnown RBP15.51■□□□□ 0.07
NLRC3-202ENST00000359128 CDR1P51861 262 aa15.51■□□□□ 0.07
NLRC3-202ENST00000359128 KIF7Q2M1P5 1343 aa15.51■□□□□ 0.07
NLRC3-202ENST00000359128 ERBINQ96RT1 1412 aa15.51■□□□□ 0.07
NLRC3-202ENST00000359128 WDHD1O75717 1129 aaPredicted RBP15.51■□□□□ 0.07
NLRC3-202ENST00000359128 SLC4A2P04920 1241 aa15.51■□□□□ 0.07
NLRC3-202ENST00000359128 ZNF652Q9Y2D9 606 aa15.51■□□□□ 0.07
NLRC3-202ENST00000359128 HECW1Q76N89 1606 aa15.51■□□□□ 0.07
NLRC3-202ENST00000359128 STARD3NLO95772 234 aa15.5■□□□□ 0.07
NLRC3-202ENST00000359128 PAXIP1Q6ZW49 1069 aaPredicted RBP15.5■□□□□ 0.07
NLRC3-202ENST00000359128 AK7Q96M32 723 aa15.5■□□□□ 0.07
NLRC3-202ENST00000359128 NCAPD3P42695 1498 aa15.49■□□□□ 0.07
NLRC3-202ENST00000359128 CCT4P50991 539 aaKnown RBP15.49■□□□□ 0.07
NLRC3-202ENST00000359128 TCP11L2Q8N4U5 519 aa15.49■□□□□ 0.07
NLRC3-202ENST00000359128 ZC3H6P61129 1189 aaKnown RBP15.49■□□□□ 0.07
NLRC3-202ENST00000359128 SDF4Q9BRK5 362 aa15.49■□□□□ 0.07
NLRC3-202ENST00000359128 CHMP5Q9NZZ3 219 aa15.49■□□□□ 0.07
NLRC3-202ENST00000359128 CC2D2AQ9P2K1 1620 aa15.49■□□□□ 0.07
NLRC3-202ENST00000359128 C22orf23Q9BZE7 217 aa15.48■□□□□ 0.07
NLRC3-202ENST00000359128 RAI14Q9P0K7 980 aa15.48■□□□□ 0.07
NLRC3-202ENST00000359128 MATR3P43243 847 aaKnown RBP eCLIP15.48■□□□□ 0.07
NLRC3-202ENST00000359128 EHBP1L1Q8N3D4 1523 aa15.48■□□□□ 0.07
NLRC3-202ENST00000359128 CAGE1Q8TC20 777 aa15.48■□□□□ 0.07
NLRC3-202ENST00000359128 ZNF396Q96N95 335 aaPredicted RBP15.48■□□□□ 0.07
NLRC3-202ENST00000359128 MYO6Q9UM54 1294 aa15.48■□□□□ 0.07
NLRC3-202ENST00000359128 EXOSC9Q06265 439 aaKnown RBP15.47■□□□□ 0.07
NLRC3-202ENST00000359128 ZHX3Q9H4I2 956 aa15.47■□□□□ 0.07
NLRC3-202ENST00000359128 TMOD3Q9NYL9 352 aa15.47■□□□□ 0.07
NLRC3-202ENST00000359128 HFM1A2PYH4 1435 aa15.47■□□□□ 0.07
NLRC3-202ENST00000359128 ADAMTS2O95450 1211 aa15.47■□□□□ 0.07
NLRC3-202ENST00000359128 FKBP4Q02790 459 aaKnown RBP eCLIP15.47■□□□□ 0.07
NLRC3-202ENST00000359128 KCNH5Q8NCM2 988 aa15.47■□□□□ 0.07
NLRC3-202ENST00000359128 NUP133Q8WUM0 1156 aa15.47■□□□□ 0.07
NLRC3-202ENST00000359128 TRIM22Q8IYM9 498 aa15.47■□□□□ 0.07
NLRC3-202ENST00000359128 SRCIN1Q9C0H9 1055 aa15.47■□□□□ 0.07
NLRC3-202ENST00000359128 ADAMTS8Q9UP79 889 aa15.47■□□□□ 0.07
NLRC3-202ENST00000359128 PPP2R1AP30153 589 aa15.46■□□□□ 0.07
NLRC3-202ENST00000359128 ZNF76P36508 570 aa15.46■□□□□ 0.07
NLRC3-202ENST00000359128 FILIP1LQ4L180 1135 aa15.46■□□□□ 0.07
NLRC3-202ENST00000359128 NOB1Q9ULX3 412 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms