RNA–Protein interactions for RNA: ENST00000358781.6

FAM3D-201, Transcript of family with sequence similarity 3 member D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3D, Length 1,319 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-201ENST00000358781 FNBP4Q8N3X1 1017 aaPredicted RBP24.07■■□□□ 1.44
FAM3D-201ENST00000358781 ATAD2Q6PL18 1390 aa24.06■■□□□ 1.44
FAM3D-201ENST00000358781 ST20-MTHFSA0A0A6YYL1 179 aa24.05■■□□□ 1.44
FAM3D-201ENST00000358781 TESK2Q96S53 571 aa24.04■■□□□ 1.44
FAM3D-201ENST00000358781 USP21Q9UK80 565 aa24.04■■□□□ 1.44
FAM3D-201ENST00000358781 USP47Q96K76 1375 aa24.03■■□□□ 1.44
FAM3D-201ENST00000358781 CRYBG1Q9Y4K1 1723 aa24.03■■□□□ 1.44
FAM3D-201ENST00000358781 BRD4O60885 1362 aaPredicted RBP24.02■■□□□ 1.44
FAM3D-201ENST00000358781 QTRT2Q9H974 415 aaKnown RBP24.02■■□□□ 1.44
FAM3D-201ENST00000358781 USP6P35125 1406 aa24.01■■□□□ 1.43
FAM3D-201ENST00000358781 RXRBP28702 533 aa24.01■■□□□ 1.43
FAM3D-201ENST00000358781 BCL9LQ86UU0 1499 aa24■■□□□ 1.43
FAM3D-201ENST00000358781 SLIT2O94813 1529 aa23.99■■□□□ 1.43
FAM3D-201ENST00000358781 SLC24A1O60721 1099 aa23.99■■□□□ 1.43
FAM3D-201ENST00000358781 AKAP12Q02952 1782 aa23.98■■□□□ 1.43
FAM3D-201ENST00000358781 PUS7Q96PZ0 661 aaKnown RBP23.98■■□□□ 1.43
FAM3D-201ENST00000358781 NUTM2GQ5VZR2 741 aa23.97■■□□□ 1.43
FAM3D-201ENST00000358781 ABTB2Q8N961 1025 aa23.97■■□□□ 1.43
FAM3D-201ENST00000358781 ZNF692Q9BU19 519 aaPredicted RBP23.97■■□□□ 1.43
FAM3D-201ENST00000358781 TRPC5Q9UL62 973 aaPredicted RBP23.97■■□□□ 1.43
FAM3D-201ENST00000358781 ATRNO75882 1429 aa23.97■■□□□ 1.43
FAM3D-201ENST00000358781 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.96■■□□□ 1.43
FAM3D-201ENST00000358781 CPSF1Q10570 1443 aaKnown RBP23.96■■□□□ 1.43
FAM3D-201ENST00000358781 SSH2Q76I76 1423 aa23.96■■□□□ 1.43
FAM3D-201ENST00000358781 RBM6P78332 1123 aaKnown RBP23.96■■□□□ 1.43
FAM3D-201ENST00000358781 PHRF1Q9P1Y6 1649 aaKnown RBP23.96■■□□□ 1.43
FAM3D-201ENST00000358781 CDK12Q9NYV4 1490 aaPredicted RBP23.96■■□□□ 1.43
FAM3D-201ENST00000358781 PLCH1Q4KWH8 1693 aa23.95■■□□□ 1.42
FAM3D-201ENST00000358781 FAM83GA6ND36 823 aa23.95■■□□□ 1.42
FAM3D-201ENST00000358781 UNC5CLQ8IV45 518 aa23.94■■□□□ 1.42
FAM3D-201ENST00000358781 NWD2Q9ULI1 1742 aa23.94■■□□□ 1.42
FAM3D-201ENST00000358781 USP19O94966 1318 aa23.93■■□□□ 1.42
FAM3D-201ENST00000358781 NLRP13Q86W25 1043 aa23.92■■□□□ 1.42
FAM3D-201ENST00000358781 TMC1Q8TDI8 760 aa23.92■■□□□ 1.42
FAM3D-201ENST00000358781 COL14A1Q05707 1796 aaKnown RBP23.92■■□□□ 1.42
FAM3D-201ENST00000358781 KTN1Q86UP2 1357 aaKnown RBP23.91■■□□□ 1.42
FAM3D-201ENST00000358781 MON2Q7Z3U7 1717 aa23.91■■□□□ 1.42
FAM3D-201ENST00000358781 NRKQ7Z2Y5 1582 aa23.91■■□□□ 1.42
FAM3D-201ENST00000358781 CD163L1Q9NR16 1453 aa23.91■■□□□ 1.42
FAM3D-201ENST00000358781 SLC12A5Q9H2X9 1139 aa23.9■■□□□ 1.42
FAM3D-201ENST00000358781 PIK3C2AO00443 1686 aa23.9■■□□□ 1.42
FAM3D-201ENST00000358781 TTC21BQ7Z4L5 1316 aa23.9■■□□□ 1.42
FAM3D-201ENST00000358781 TMF1P82094 1093 aa23.89■■□□□ 1.42
FAM3D-201ENST00000358781 PRDM11Q9NQV5 511 aa23.88■■□□□ 1.41
FAM3D-201ENST00000358781 TTC21AQ8NDW8 1320 aa23.88■■□□□ 1.41
FAM3D-201ENST00000358781 KIAA0232Q92628 1395 aa23.88■■□□□ 1.41
FAM3D-201ENST00000358781 NINLQ9Y2I6 1382 aa23.88■■□□□ 1.41
FAM3D-201ENST00000358781 RGS12O14924 1447 aa23.87■■□□□ 1.41
FAM3D-201ENST00000358781 NLRP6P59044 892 aa23.87■■□□□ 1.41
FAM3D-201ENST00000358781 HDGFL2Q7Z4V5 671 aaPredicted RBP23.87■■□□□ 1.41
FAM3D-201ENST00000358781 ZC3H6P61129 1189 aaKnown RBP23.86■■□□□ 1.41
FAM3D-201ENST00000358781 GJD4Q96KN9 370 aaPredicted RBP23.86■■□□□ 1.41
FAM3D-201ENST00000358781 TERF2IPQ9NYB0 399 aa23.86■■□□□ 1.41
FAM3D-201ENST00000358781 NRAPQ86VF7 1730 aa23.86■■□□□ 1.41
FAM3D-201ENST00000358781 GCP02774 474 aa23.85■■□□□ 1.41
FAM3D-201ENST00000358781 BTG4Q9NY30 223 aa23.85■■□□□ 1.41
FAM3D-201ENST00000358781 SLIT3O75094 1523 aa23.85■■□□□ 1.41
FAM3D-201ENST00000358781 VPS72Q15906 364 aa23.84■■□□□ 1.41
FAM3D-201ENST00000358781 A0A1W2PP64 1363 aa23.84■■□□□ 1.41
FAM3D-201ENST00000358781 CDCA8Q53HL2 280 aa23.84■■□□□ 1.41
FAM3D-201ENST00000358781 CPDO75976 1380 aa23.83■■□□□ 1.41
FAM3D-201ENST00000358781 GLI3P10071 1580 aa23.83■■□□□ 1.41
FAM3D-201ENST00000358781 CHRNA2Q15822 529 aa23.83■■□□□ 1.4
FAM3D-201ENST00000358781 EDC4Q6P2E9 1401 aaKnown RBP23.82■■□□□ 1.4
FAM3D-201ENST00000358781 EIF4G2P78344 907 aaKnown RBP eCLIP23.81■■□□□ 1.4
FAM3D-201ENST00000358781 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.81■■□□□ 1.4
FAM3D-201ENST00000358781 CCDC9Q9Y3X0 531 aaKnown RBP23.79■■□□□ 1.4
FAM3D-201ENST00000358781 HSPA5P11021 654 aaKnown RBP23.78■■□□□ 1.4
FAM3D-201ENST00000358781 USP54Q70EL1 1684 aa23.78■■□□□ 1.4
FAM3D-201ENST00000358781 LMO7Q8WWI1 1683 aa23.78■■□□□ 1.4
FAM3D-201ENST00000358781 USP31Q70CQ4 1352 aa23.77■■□□□ 1.4
FAM3D-201ENST00000358781 ANKRD36BQ8N2N9 1353 aa23.77■■□□□ 1.4
FAM3D-201ENST00000358781 NME9Q86XW9 330 aa23.77■■□□□ 1.4
FAM3D-201ENST00000358781 ZRANB1Q9UGI0 708 aa23.76■■□□□ 1.39
FAM3D-201ENST00000358781 CAMTA1Q9Y6Y1 1673 aa23.75■■□□□ 1.39
FAM3D-201ENST00000358781 KCNH5Q8NCM2 988 aa23.75■■□□□ 1.39
FAM3D-201ENST00000358781 SPATA31A5Q5VU36 1347 aa23.73■■□□□ 1.39
FAM3D-201ENST00000358781 SPATA31A7Q8IWB4 1347 aa23.73■■□□□ 1.39
FAM3D-201ENST00000358781 MYOM1P52179 1685 aa23.73■■□□□ 1.39
FAM3D-201ENST00000358781 STRN4Q9NRL3 753 aa23.73■■□□□ 1.39
FAM3D-201ENST00000358781 AATKQ6ZMQ8 1374 aa23.73■■□□□ 1.39
FAM3D-201ENST00000358781 NFAT5O94916 1531 aa23.73■■□□□ 1.39
FAM3D-201ENST00000358781 ZBTB7CA1YPR0 619 aa23.72■■□□□ 1.39
FAM3D-201ENST00000358781 ONECUT3O60422 494 aaPredicted RBP23.72■■□□□ 1.39
FAM3D-201ENST00000358781 SOX12O15370 315 aa23.71■■□□□ 1.39
FAM3D-201ENST00000358781 ARHGEF25Q86VW2 580 aa23.71■■□□□ 1.39
FAM3D-201ENST00000358781 COL18A1P39060 1754 aa23.71■■□□□ 1.39
FAM3D-201ENST00000358781 EP400Q96L91 3159 aa23.71■■□□□ 1.39
FAM3D-201ENST00000358781 EVA1CP58658 441 aa23.7■■□□□ 1.38
FAM3D-201ENST00000358781 OVOS2A0A0J9YW53 1432 aa23.69■■□□□ 1.38
FAM3D-201ENST00000358781 OVOS2Q6IE36 1432 aa23.69■■□□□ 1.38
FAM3D-201ENST00000358781 SEPT12Q8IYM1 358 aa23.69■■□□□ 1.38
FAM3D-201ENST00000358781 SPATA31A1Q5TZJ5 1347 aa23.69■■□□□ 1.38
FAM3D-201ENST00000358781 BRWD3Q6RI45 1802 aa23.68■■□□□ 1.38
FAM3D-201ENST00000358781 FAM98CQ17RN3 349 aaKnown RBP23.68■■□□□ 1.38
FAM3D-201ENST00000358781 UPF1Q92900 1129 aaKnown RBP eCLIP23.68■■□□□ 1.38
FAM3D-201ENST00000358781 COL5A2P05997 1499 aaPredicted RBP23.68■■□□□ 1.38
FAM3D-201ENST00000358781 LARP1Q6PKG0 1096 aaKnown RBP23.66■■□□□ 1.38
FAM3D-201ENST00000358781 AXIN2Q9Y2T1 843 aa23.64■■□□□ 1.38
FAM3D-201ENST00000358781 ABCC6O95255 1503 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms