RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 WWC2Q6AWC2 1192 aa13.34□□□□□ -0.27
COL11A1-202ENST00000358392 PDCL3Q9H2J4 239 aa13.33□□□□□ -0.27
COL11A1-202ENST00000358392 UBTFL1P0CB47 393 aaPredicted RBP13.33□□□□□ -0.28
COL11A1-202ENST00000358392 PSME1Q06323 249 aa13.33□□□□□ -0.28
COL11A1-202ENST00000358392 TAF3Q5VWG9 929 aa13.33□□□□□ -0.28
COL11A1-202ENST00000358392 PRDM10Q9NQV6 1147 aa13.33□□□□□ -0.28
COL11A1-202ENST00000358392 CCP110O43303 1012 aa13.32□□□□□ -0.28
COL11A1-202ENST00000358392 CLASRPQ8N2M8 674 aaKnown RBP13.32□□□□□ -0.28
COL11A1-202ENST00000358392 ZNHIT6Q9NWK9 470 aaKnown RBP13.32□□□□□ -0.28
COL11A1-202ENST00000358392 LRRFIP2Q9Y608 721 aaKnown RBP13.32□□□□□ -0.28
COL11A1-202ENST00000358392 STK38Q15208 465 aa13.32□□□□□ -0.28
COL11A1-202ENST00000358392 PPFIBP1Q86W92 1011 aa13.32□□□□□ -0.28
COL11A1-202ENST00000358392 USP47Q96K76 1375 aa13.32□□□□□ -0.28
COL11A1-202ENST00000358392 CCDC144AA2RUR9 1427 aa13.32□□□□□ -0.28
COL11A1-202ENST00000358392 TXLNAP40222 546 aa13.32□□□□□ -0.28
COL11A1-202ENST00000358392 CCDC102AQ96A19 550 aa13.31□□□□□ -0.28
COL11A1-202ENST00000358392 RUNDC1Q96C34 613 aa13.31□□□□□ -0.28
COL11A1-202ENST00000358392 GOLGA6L7A0A1B0GV03 622 aa13.3□□□□□ -0.28
COL11A1-202ENST00000358392 TNMDQ9H2S6 317 aa13.3□□□□□ -0.28
COL11A1-202ENST00000358392 SART3Q15020 963 aaKnown RBP13.3□□□□□ -0.28
COL11A1-202ENST00000358392 HSP90AB4PQ58FF6 505 aa13.3□□□□□ -0.28
COL11A1-202ENST00000358392 DYDC1Q8WWB3 177 aa13.3□□□□□ -0.28
COL11A1-202ENST00000358392 CCDC97Q96F63 343 aaPredicted RBP13.3□□□□□ -0.28
COL11A1-202ENST00000358392 CCDC112Q8NEF3 446 aa13.3□□□□□ -0.28
COL11A1-202ENST00000358392 ANKRD18AQ8IVF6 992 aa13.29□□□□□ -0.28
COL11A1-202ENST00000358392 ZNF396Q96N95 335 aaPredicted RBP13.29□□□□□ -0.28
COL11A1-202ENST00000358392 CARMIL2Q6F5E8 1435 aa13.29□□□□□ -0.28
COL11A1-202ENST00000358392 TICAM2Q86XR7 235 aa13.28□□□□□ -0.28
COL11A1-202ENST00000358392 SURF6O75683 361 aaKnown RBP13.28□□□□□ -0.28
COL11A1-202ENST00000358392 GBP2P32456 591 aaPredicted RBP13.28□□□□□ -0.28
COL11A1-202ENST00000358392 ME1P48163 572 aa13.28□□□□□ -0.28
COL11A1-202ENST00000358392 RBM25P49756 843 aaKnown RBP13.28□□□□□ -0.28
COL11A1-202ENST00000358392 LRRCC1Q9C099 1032 aa13.28□□□□□ -0.28
COL11A1-202ENST00000358392 TTC39AQ5SRH9 613 aa13.28□□□□□ -0.28
COL11A1-202ENST00000358392 PIBF1Q8WXW3 757 aa13.28□□□□□ -0.28
COL11A1-202ENST00000358392 GOLGA6L10A0A0M3HER8 536 aa13.28□□□□□ -0.28
COL11A1-202ENST00000358392 TBC1D2BQ9UPU7 963 aa13.28□□□□□ -0.28
COL11A1-202ENST00000358392 SSR1P43307 286 aaKnown RBP13.27□□□□□ -0.28
COL11A1-202ENST00000358392 MATR3P43243 847 aaKnown RBP eCLIP13.27□□□□□ -0.29
COL11A1-202ENST00000358392 RB1CC1Q8TDY2 1594 aa13.27□□□□□ -0.29
COL11A1-202ENST00000358392 AEBP1Q8IUX7 1158 aa13.27□□□□□ -0.29
COL11A1-202ENST00000358392 MBD3O95983 291 aa13.26□□□□□ -0.29
COL11A1-202ENST00000358392 CCDC192P0DO97 292 aa13.26□□□□□ -0.29
COL11A1-202ENST00000358392 NUP133Q8WUM0 1156 aa13.26□□□□□ -0.29
COL11A1-202ENST00000358392 SIL1Q9H173 461 aa13.26□□□□□ -0.29
COL11A1-202ENST00000358392 EIF3JO75822 258 aaKnown RBP13.26□□□□□ -0.29
COL11A1-202ENST00000358392 TMX1Q9H3N1 280 aa13.26□□□□□ -0.29
COL11A1-202ENST00000358392 GNAI1P63096 354 aa13.26□□□□□ -0.29
COL11A1-202ENST00000358392 CCDC113Q9H0I3 377 aa13.26□□□□□ -0.29
COL11A1-202ENST00000358392 HMGN5P82970 282 aaKnown RBP13.25□□□□□ -0.29
COL11A1-202ENST00000358392 GIMAP7Q8NHV1 300 aa13.25□□□□□ -0.29
COL11A1-202ENST00000358392 TRERF1Q96PN7 1200 aa13.25□□□□□ -0.29
COL11A1-202ENST00000358392 PHF23Q9BUL5 403 aaPredicted RBP13.25□□□□□ -0.29
COL11A1-202ENST00000358392 GRPEL1Q9HAV7 217 aa13.25□□□□□ -0.29
COL11A1-202ENST00000358392 PDZRN3Q9UPQ7 1066 aa13.25□□□□□ -0.29
COL11A1-202ENST00000358392 EZRP15311 586 aaKnown RBP13.25□□□□□ -0.29
COL11A1-202ENST00000358392 SSBP05455 408 aaKnown RBP eCLIP13.24□□□□□ -0.29
COL11A1-202ENST00000358392 CBX1P83916 185 aa13.24□□□□□ -0.29
COL11A1-202ENST00000358392 INCENPQ9NQS7 918 aa13.24□□□□□ -0.29
COL11A1-202ENST00000358392 ERLIN1O75477 346 aa13.24□□□□□ -0.29
COL11A1-202ENST00000358392 GGNBP2Q9H3C7 697 aa13.24□□□□□ -0.29
COL11A1-202ENST00000358392 PPP1R1BQ9UD71 204 aaPredicted RBP13.24□□□□□ -0.29
COL11A1-202ENST00000358392 KIF7Q2M1P5 1343 aa13.24□□□□□ -0.29
COL11A1-202ENST00000358392 KIAA1328Q86T90 577 aa13.24□□□□□ -0.29
COL11A1-202ENST00000358392 NF2P35240 595 aa13.24□□□□□ -0.29
COL11A1-202ENST00000358392 RAPGEF4Q8WZA2 1011 aa13.23□□□□□ -0.29
COL11A1-202ENST00000358392 SPINK5Q9NQ38 1064 aaPredicted RBP13.23□□□□□ -0.29
COL11A1-202ENST00000358392 CCDC69A6NI79 296 aa13.23□□□□□ -0.29
COL11A1-202ENST00000358392 SLC3A2P08195 630 aaKnown RBP13.23□□□□□ -0.29
COL11A1-202ENST00000358392 CNNM1Q9NRU3 951 aa13.23□□□□□ -0.29
COL11A1-202ENST00000358392 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.23□□□□□ -0.29
COL11A1-202ENST00000358392 FHOD3Q2V2M9 1422 aa13.23□□□□□ -0.29
COL11A1-202ENST00000358392 STIM1Q13586 685 aa13.23□□□□□ -0.29
COL11A1-202ENST00000358392 NEBLO76041 1014 aa13.23□□□□□ -0.29
COL11A1-202ENST00000358392 FILIP1Q7Z7B0 1213 aa13.23□□□□□ -0.29
COL11A1-202ENST00000358392 NLRP2Q9NX02 1062 aa13.22□□□□□ -0.29
COL11A1-202ENST00000358392 CAMK4Q16566 473 aa13.22□□□□□ -0.29
COL11A1-202ENST00000358392 CDCA7LQ96GN5 454 aa13.22□□□□□ -0.29
COL11A1-202ENST00000358392 MAP2K1Q02750 393 aaPredicted RBP13.22□□□□□ -0.29
COL11A1-202ENST00000358392 CFAP45Q9UL16 551 aa13.22□□□□□ -0.29
COL11A1-202ENST00000358392 RABEP1Q15276 862 aa13.22□□□□□ -0.29
COL11A1-202ENST00000358392 CABP2Q9NPB3 220 aa13.22□□□□□ -0.29
COL11A1-202ENST00000358392 UACAQ9BZF9 1416 aa13.22□□□□□ -0.29
COL11A1-202ENST00000358392 KIF6Q6ZMV9 814 aa13.21□□□□□ -0.29
COL11A1-202ENST00000358392 RBM42Q9BTD8 480 aaKnown RBP13.21□□□□□ -0.29
COL11A1-202ENST00000358392 LUC7LQ9NQ29 371 aaKnown RBP13.21□□□□□ -0.29
COL11A1-202ENST00000358392 NOB1Q9ULX3 412 aaKnown RBP13.21□□□□□ -0.29
COL11A1-202ENST00000358392 BCCIPQ9P287 314 aaKnown RBP eCLIP13.21□□□□□ -0.29
COL11A1-202ENST00000358392 DACH1Q9UI36 760 aa13.21□□□□□ -0.29
COL11A1-202ENST00000358392 PDCP20941 246 aa13.21□□□□□ -0.3
COL11A1-202ENST00000358392 PIP4K2AP48426 406 aaPredicted RBP13.21□□□□□ -0.3
COL11A1-202ENST00000358392 GPATCH11Q8N954 259 aa13.21□□□□□ -0.3
COL11A1-202ENST00000358392 GOPCQ9HD26 462 aa13.21□□□□□ -0.3
COL11A1-202ENST00000358392 CYP46A1Q9Y6A2 500 aa13.21□□□□□ -0.3
COL11A1-202ENST00000358392 ZFP91Q96JP5 570 aaPredicted RBP13.2□□□□□ -0.3
COL11A1-202ENST00000358392 VGFO15240 615 aaPredicted RBP13.2□□□□□ -0.3
COL11A1-202ENST00000358392 DNA2P51530 1060 aa13.2□□□□□ -0.3
COL11A1-202ENST00000358392 LARP1BQ659C4 914 aaKnown RBP13.19□□□□□ -0.3
COL11A1-202ENST00000358392 RBM5P52756 815 aaKnown RBP eCLIP13.19□□□□□ -0.3
COL11A1-202ENST00000358392 CBFA2T2O43439 604 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms