RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 INSRP06213 1382 aa22.93■■□□□ 1.26
TPM1-205ENST00000357980 SHPRHQ149N8 1683 aa22.92■■□□□ 1.26
TPM1-205ENST00000357980 NGDNQ8NEJ9 315 aaKnown RBP22.92■■□□□ 1.26
TPM1-205ENST00000357980 LRRC7Q96NW7 1537 aa22.9■■□□□ 1.26
TPM1-205ENST00000357980 SCAF1Q9H7N4 1312 aaKnown RBP22.9■■□□□ 1.26
TPM1-205ENST00000357980 PHF8Q9UPP1 1060 aa22.89■■□□□ 1.26
TPM1-205ENST00000357980 PIK3C2AO00443 1686 aa22.89■■□□□ 1.26
TPM1-205ENST00000357980 OVOS2A0A0J9YW53 1432 aa22.89■■□□□ 1.25
TPM1-205ENST00000357980 OVOS2Q6IE36 1432 aa22.89■■□□□ 1.25
TPM1-205ENST00000357980 ZNF335Q9H4Z2 1342 aaPredicted RBP22.89■■□□□ 1.25
TPM1-205ENST00000357980 MTHFSP49914 203 aa22.89■■□□□ 1.25
TPM1-205ENST00000357980 BLMP54132 1417 aaPredicted RBP22.88■■□□□ 1.25
TPM1-205ENST00000357980 TTC21AQ8NDW8 1320 aa22.88■■□□□ 1.25
TPM1-205ENST00000357980 ZRANB1Q9UGI0 708 aa22.88■■□□□ 1.25
TPM1-205ENST00000357980 MAP2P11137 1827 aaKnown RBP22.88■■□□□ 1.25
TPM1-205ENST00000357980 C1orf167Q5SNV9 1468 aa22.88■■□□□ 1.25
TPM1-205ENST00000357980 DMRT2Q9Y5R5 561 aa22.87■■□□□ 1.25
TPM1-205ENST00000357980 KIF1AQ12756 1690 aa22.87■■□□□ 1.25
TPM1-205ENST00000357980 USP54Q70EL1 1684 aa22.87■■□□□ 1.25
TPM1-205ENST00000357980 MST1RQ04912 1400 aa22.87■■□□□ 1.25
TPM1-205ENST00000357980 COG3Q96JB2 828 aa22.85■■□□□ 1.25
TPM1-205ENST00000357980 AATKQ6ZMQ8 1374 aa22.85■■□□□ 1.25
TPM1-205ENST00000357980 COL3A1P02461 1466 aaPredicted RBP22.85■■□□□ 1.25
TPM1-205ENST00000357980 ESCO1Q5FWF5 840 aa22.85■■□□□ 1.25
TPM1-205ENST00000357980 MARF1Q9Y4F3 1742 aaKnown RBP22.84■■□□□ 1.25
TPM1-205ENST00000357980 ZBED9Q6R2W3 1325 aa22.84■■□□□ 1.25
TPM1-205ENST00000357980 ADAMTS8Q9UP79 889 aa22.84■■□□□ 1.25
TPM1-205ENST00000357980 MSH6P52701 1360 aa22.84■■□□□ 1.25
TPM1-205ENST00000357980 SMG6Q86US8 1419 aaKnown RBP22.83■■□□□ 1.25
TPM1-205ENST00000357980 WDR43Q15061 677 aaKnown RBP eCLIP22.83■■□□□ 1.25
TPM1-205ENST00000357980 ATF3P18847 181 aa22.82■■□□□ 1.24
TPM1-205ENST00000357980 ORAI2Q96SN7 254 aa22.82■■□□□ 1.24
TPM1-205ENST00000357980 USP31Q70CQ4 1352 aa22.82■■□□□ 1.24
TPM1-205ENST00000357980 CFAP53Q96M91 514 aa22.82■■□□□ 1.24
TPM1-205ENST00000357980 PNPLA6Q8IY17 1366 aa22.82■■□□□ 1.24
TPM1-205ENST00000357980 CADPS2Q86UW7 1296 aa22.8■■□□□ 1.24
TPM1-205ENST00000357980 POLKQ9UBT6 870 aa22.8■■□□□ 1.24
TPM1-205ENST00000357980 TRPM3Q9HCF6 1732 aaPredicted RBP22.79■■□□□ 1.24
TPM1-205ENST00000357980 FBLN1P23142 703 aa22.78■■□□□ 1.24
TPM1-205ENST00000357980 CDK12Q9NYV4 1490 aaPredicted RBP22.78■■□□□ 1.24
TPM1-205ENST00000357980 FOXO3O43524 673 aa22.74■■□□□ 1.23
TPM1-205ENST00000357980 PSME1Q06323 249 aa22.74■■□□□ 1.23
TPM1-205ENST00000357980 EMILIN1Q9Y6C2 1016 aa22.74■■□□□ 1.23
TPM1-205ENST00000357980 PEAK1Q9H792 1746 aa22.73■■□□□ 1.23
TPM1-205ENST00000357980 PAK3O75914 559 aaPredicted RBP22.71■■□□□ 1.23
TPM1-205ENST00000357980 RRS1Q15050 365 aaKnown RBP22.71■■□□□ 1.23
TPM1-205ENST00000357980 ABTB2Q8N961 1025 aa22.71■■□□□ 1.23
TPM1-205ENST00000357980 NLRP6P59044 892 aa22.71■■□□□ 1.23
TPM1-205ENST00000357980 ALS2Q96Q42 1657 aa22.7■■□□□ 1.22
TPM1-205ENST00000357980 SENP3-EIF4A1A0A087X0R7 540 aa22.7■■□□□ 1.22
TPM1-205ENST00000357980 LTBP4Q8N2S1 1624 aa22.69■■□□□ 1.22
TPM1-205ENST00000357980 PPM1GO15355 546 aaPredicted RBP22.68■■□□□ 1.22
TPM1-205ENST00000357980 DIAPH1O60610 1272 aaKnown RBP22.68■■□□□ 1.22
TPM1-205ENST00000357980 XPCQ01831 940 aaPredicted RBP22.67■■□□□ 1.22
TPM1-205ENST00000357980 CCDC146Q8IYE0 955 aa22.67■■□□□ 1.22
TPM1-205ENST00000357980 NUDCQ9Y266 331 aa22.67■■□□□ 1.22
TPM1-205ENST00000357980 NUTM2GQ5VZR2 741 aa22.66■■□□□ 1.22
TPM1-205ENST00000357980 KRT28Q7Z3Y7 464 aa22.66■■□□□ 1.22
TPM1-205ENST00000357980 NFAT5O94916 1531 aa22.66■■□□□ 1.22
TPM1-205ENST00000357980 IQSEC2Q5JU85 1478 aa22.65■■□□□ 1.22
TPM1-205ENST00000357980 PXDNQ92626 1479 aa22.65■■□□□ 1.22
TPM1-205ENST00000357980 U2AF1L5P0DN76 240 aaPredicted RBP22.64■■□□□ 1.22
TPM1-205ENST00000357980 U2AF1Q01081 240 aaKnown RBP eCLIP22.64■■□□□ 1.226e-9■■■■□ 21.7
TPM1-205ENST00000357980 BRINP3Q76B58 766 aa22.64■■□□□ 1.22
TPM1-205ENST00000357980 MAP3K19Q56UN5 1328 aa22.64■■□□□ 1.22
TPM1-205ENST00000357980 NPHP3Q7Z494 1330 aa22.64■■□□□ 1.22
TPM1-205ENST00000357980 SLIT3O75094 1523 aa22.64■■□□□ 1.21
TPM1-205ENST00000357980 LTN1O94822 1766 aa22.64■■□□□ 1.21
TPM1-205ENST00000357980 SLAIN2Q9P270 581 aa22.64■■□□□ 1.21
TPM1-205ENST00000357980 IL13P35225 146 aa22.63■■□□□ 1.21
TPM1-205ENST00000357980 SBNO1A3KN83 1393 aa22.63■■□□□ 1.21
TPM1-205ENST00000357980 U2SURPO15042 1029 aaKnown RBP22.62■■□□□ 1.21
TPM1-205ENST00000357980 SOX12O15370 315 aa22.62■■□□□ 1.21
TPM1-205ENST00000357980 PHRF1Q9P1Y6 1649 aaKnown RBP22.62■■□□□ 1.21
TPM1-205ENST00000357980 DDX17Q92841 729 aaKnown RBP22.61■■□□□ 1.21
TPM1-205ENST00000357980 RUNDC1Q96C34 613 aa22.61■■□□□ 1.21
TPM1-205ENST00000357980 FLT4P35916 1363 aa22.61■■□□□ 1.21
TPM1-205ENST00000357980 KIF24Q5T7B8 1368 aa22.61■■□□□ 1.21
TPM1-205ENST00000357980 APAF1O14727 1248 aa22.61■■□□□ 1.21
TPM1-205ENST00000357980 SALL2Q9Y467 1007 aaPredicted RBP22.61■■□□□ 1.21
TPM1-205ENST00000357980 RGPD1P0DJD0 1748 aa22.61■■□□□ 1.21
TPM1-205ENST00000357980 USP19O94966 1318 aa22.6■■□□□ 1.21
TPM1-205ENST00000357980 ZNF521Q96K83 1311 aa22.59■■□□□ 1.21
TPM1-205ENST00000357980 PLEKHF1Q96S99 279 aa22.59■■□□□ 1.21
TPM1-205ENST00000357980 NHSL1Q5SYE7 1610 aa22.58■■□□□ 1.21
TPM1-205ENST00000357980 NGEFQ8N5V2 710 aa22.58■■□□□ 1.21
TPM1-205ENST00000357980 TNS3Q68CZ2 1445 aa22.58■■□□□ 1.2
TPM1-205ENST00000357980 PDE3BQ13370 1112 aa22.57■■□□□ 1.2
TPM1-205ENST00000357980 MED1Q15648 1581 aaPredicted RBP22.57■■□□□ 1.2
TPM1-205ENST00000357980 EIF4A2Q14240 407 aaKnown RBP22.57■■□□□ 1.2
TPM1-205ENST00000357980 HSP90AB2PQ58FF8 381 aa22.57■■□□□ 1.2
TPM1-205ENST00000357980 CRYBG1Q9Y4K1 1723 aa22.57■■□□□ 1.2
TPM1-205ENST00000357980 RTL1A6NKG5 1358 aa22.56■■□□□ 1.2
TPM1-205ENST00000357980 KCNH5Q8NCM2 988 aa22.56■■□□□ 1.2
TPM1-205ENST00000357980 FCHSD2O94868 740 aa22.55■■□□□ 1.2
TPM1-205ENST00000357980 TCP11L2Q8N4U5 519 aa22.55■■□□□ 1.2
TPM1-205ENST00000357980 RSPH6AQ9H0K4 717 aa22.54■■□□□ 1.2
TPM1-205ENST00000357980 AMPHP49418 695 aa22.54■■□□□ 1.2
TPM1-205ENST00000357980 SPATA31A3Q5VYP0 1347 aa22.53■■□□□ 1.2
TPM1-205ENST00000357980 LMOD2Q6P5Q4 547 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms