RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 UPF2Q9HAU5 1272 aaKnown RBP13.6□□□□□ -0.23
CAPN3-205ENST00000357568 POGKQ9P215 609 aa13.6□□□□□ -0.23
CAPN3-205ENST00000357568 PMFBP1Q8TBY8 1022 aa13.6□□□□□ -0.23
CAPN3-205ENST00000357568 CLUAP1Q96AJ1 413 aa13.6□□□□□ -0.23
CAPN3-205ENST00000357568 NRXN3Q9Y4C0 1643 aa13.59□□□□□ -0.23
CAPN3-205ENST00000357568 CLCN1P35523 988 aa13.59□□□□□ -0.23
CAPN3-205ENST00000357568 TBC1D32Q96NH3 1257 aa13.59□□□□□ -0.23
CAPN3-205ENST00000357568 RRAGDQ9NQL2 400 aaPredicted RBP13.59□□□□□ -0.23
CAPN3-205ENST00000357568 DMRT2Q9Y5R5 561 aa13.59□□□□□ -0.23
CAPN3-205ENST00000357568 NCKAP5LQ9HCH0 1330 aa13.59□□□□□ -0.23
CAPN3-205ENST00000357568 SETD1AO15047 1707 aaKnown RBP13.57□□□□□ -0.24
CAPN3-205ENST00000357568 IGHDP01880 384 aa13.57□□□□□ -0.24
CAPN3-205ENST00000357568 GOLGA6L3A6NEY3 463 aa13.57□□□□□ -0.24
CAPN3-205ENST00000357568 ALKQ9UM73 1620 aa13.56□□□□□ -0.24
CAPN3-205ENST00000357568 ADGRF5Q8IZF2 1346 aa13.56□□□□□ -0.24
CAPN3-205ENST00000357568 ADAMTS13Q76LX8 1427 aa13.56□□□□□ -0.24
CAPN3-205ENST00000357568 PIK3R4Q99570 1358 aa13.55□□□□□ -0.24
CAPN3-205ENST00000357568 TBX22Q9Y458 520 aa13.55□□□□□ -0.24
CAPN3-205ENST00000357568 CENPJQ9HC77 1338 aaPredicted RBP13.55□□□□□ -0.24
CAPN3-205ENST00000357568 POLR3AO14802 1390 aaPredicted RBP13.55□□□□□ -0.24
CAPN3-205ENST00000357568 RRP9O43818 475 aaKnown RBP13.54□□□□□ -0.24
CAPN3-205ENST00000357568 MCM4P33991 863 aa13.53□□□□□ -0.24
CAPN3-205ENST00000357568 MRE11P49959 708 aa13.53□□□□□ -0.24
CAPN3-205ENST00000357568 C14orf93Q9H972 538 aaKnown RBP13.53□□□□□ -0.24
CAPN3-205ENST00000357568 NUTM2DQ5VT03 806 aaPredicted RBP13.53□□□□□ -0.24
CAPN3-205ENST00000357568 BCAR3O75815 825 aa13.52□□□□□ -0.24
CAPN3-205ENST00000357568 XRCC6P12956 609 aaKnown RBP eCLIP13.52□□□□□ -0.24
CAPN3-205ENST00000357568 TBC1D2Q9BYX2 928 aa13.52□□□□□ -0.24
CAPN3-205ENST00000357568 PNNQ9H307 717 aaKnown RBP13.52□□□□□ -0.24
CAPN3-205ENST00000357568 CHMP5Q9NZZ3 219 aa13.52□□□□□ -0.24
CAPN3-205ENST00000357568 SEC24BO95487 1268 aa13.52□□□□□ -0.25
CAPN3-205ENST00000357568 NWD1Q149M9 1564 aa13.52□□□□□ -0.25
CAPN3-205ENST00000357568 CHD2O14647 1828 aaKnown RBP13.52□□□□□ -0.25
CAPN3-205ENST00000357568 APAF1O14727 1248 aa13.51□□□□□ -0.25
CAPN3-205ENST00000357568 SPINK5Q9NQ38 1064 aaPredicted RBP13.51□□□□□ -0.25
CAPN3-205ENST00000357568 KNDC1Q76NI1 1749 aa13.51□□□□□ -0.25
CAPN3-205ENST00000357568 IQSEC2Q5JU85 1478 aa13.51□□□□□ -0.25
CAPN3-205ENST00000357568 DDX11L8A8MPP1 907 aa13.5□□□□□ -0.25
CAPN3-205ENST00000357568 PTMSP20962 102 aa13.5□□□□□ -0.25
CAPN3-205ENST00000357568 NCOA3Q9Y6Q9 1424 aa13.49□□□□□ -0.25
CAPN3-205ENST00000357568 ADGRB1O14514 1584 aa13.49□□□□□ -0.25
CAPN3-205ENST00000357568 SLKQ9H2G2 1235 aaPredicted RBP13.49□□□□□ -0.25
CAPN3-205ENST00000357568 RWDD1Q9H446 243 aaPredicted RBP13.49□□□□□ -0.25
CAPN3-205ENST00000357568 XRN1Q8IZH2 1706 aaKnown RBP13.49□□□□□ -0.25
CAPN3-205ENST00000357568 SBNO2Q9Y2G9 1366 aa13.48□□□□□ -0.25
CAPN3-205ENST00000357568 ZMYND15Q9H091 742 aa13.48□□□□□ -0.25
CAPN3-205ENST00000357568 SHPRHQ149N8 1683 aa13.48□□□□□ -0.25
CAPN3-205ENST00000357568 CCDC27Q2M243 656 aa13.47□□□□□ -0.25
CAPN3-205ENST00000357568 WDR63Q8IWG1 891 aa13.47□□□□□ -0.25
CAPN3-205ENST00000357568 USP32Q8NFA0 1604 aa13.47□□□□□ -0.25
CAPN3-205ENST00000357568 HSP90AA1P07900 732 aaKnown RBP13.47□□□□□ -0.25
CAPN3-205ENST00000357568 CFAP70Q5T0N1 1121 aa13.47□□□□□ -0.25
CAPN3-205ENST00000357568 WWC1Q8IX03 1113 aa13.47□□□□□ -0.25
CAPN3-205ENST00000357568 DLC1Q96QB1 1528 aa13.47□□□□□ -0.25
CAPN3-205ENST00000357568 CANXP27824 592 aaKnown RBP13.47□□□□□ -0.25
CAPN3-205ENST00000357568 SLC26A8Q96RN1 970 aa13.47□□□□□ -0.25
CAPN3-205ENST00000357568 CT47B1P0C2W7 299 aaPredicted RBP13.46□□□□□ -0.25
CAPN3-205ENST00000357568 RARSP54136 660 aaKnown RBP13.46□□□□□ -0.25
CAPN3-205ENST00000357568 TECPR2O15040 1411 aa13.46□□□□□ -0.25
CAPN3-205ENST00000357568 METP08581 1390 aa13.46□□□□□ -0.26
CAPN3-205ENST00000357568 KCNA6P17658 529 aa13.46□□□□□ -0.26
CAPN3-205ENST00000357568 CIZ1Q9ULV3 898 aaPredicted RBP13.46□□□□□ -0.26
CAPN3-205ENST00000357568 COG6Q9Y2V7 657 aa13.46□□□□□ -0.26
CAPN3-205ENST00000357568 CPS1P31327 1500 aa13.45□□□□□ -0.26
CAPN3-205ENST00000357568 TRAK2O60296 914 aa13.45□□□□□ -0.26
CAPN3-205ENST00000357568 CCDC146Q8IYE0 955 aa13.45□□□□□ -0.26
CAPN3-205ENST00000357568 PDZRN3Q9UPQ7 1066 aa13.45□□□□□ -0.26
CAPN3-205ENST00000357568 ABCC11Q96J66 1382 aa13.45□□□□□ -0.26
CAPN3-205ENST00000357568 PTPRUQ92729 1446 aa13.45□□□□□ -0.26
CAPN3-205ENST00000357568 YTHDC2Q9H6S0 1430 aaKnown RBP13.45□□□□□ -0.26
CAPN3-205ENST00000357568 SIRT1Q96EB6 747 aa13.45□□□□□ -0.26
CAPN3-205ENST00000357568 STRCP1A6NGW2 1772 aa13.44□□□□□ -0.26
CAPN3-205ENST00000357568 PANK1Q8TE04 598 aa13.44□□□□□ -0.26
CAPN3-205ENST00000357568 PTCH1Q13635 1447 aa13.44□□□□□ -0.26
CAPN3-205ENST00000357568 TPM2P07951 284 aa13.44□□□□□ -0.26
CAPN3-205ENST00000357568 HSP90AA2PQ14568 343 aaPredicted RBP13.44□□□□□ -0.26
CAPN3-205ENST00000357568 NAP1L5Q96NT1 182 aaPredicted RBP13.44□□□□□ -0.26
CAPN3-205ENST00000357568 DDIT3P35638 169 aa13.43□□□□□ -0.26
CAPN3-205ENST00000357568 SKOR2Q2VWA4 1001 aaPredicted RBP13.43□□□□□ -0.26
CAPN3-205ENST00000357568 SNX21Q969T3 373 aa13.43□□□□□ -0.26
CAPN3-205ENST00000357568 RUNDC1Q96C34 613 aa13.42□□□□□ -0.26
CAPN3-205ENST00000357568 MYH16Q9H6N6 1097 aa13.42□□□□□ -0.26
CAPN3-205ENST00000357568 GRPEL1Q9HAV7 217 aa13.42□□□□□ -0.26
CAPN3-205ENST00000357568 PCDHB15Q9Y5E8 787 aa13.42□□□□□ -0.26
CAPN3-205ENST00000357568 FAM135BQ49AJ0 1406 aa13.42□□□□□ -0.26
CAPN3-205ENST00000357568 ARHGEF28Q8N1W1 1705 aaKnown RBP13.42□□□□□ -0.26
CAPN3-205ENST00000357568 LTBP4Q8N2S1 1624 aa13.42□□□□□ -0.26
CAPN3-205ENST00000357568 VSIG10Q8N0Z9 540 aa13.42□□□□□ -0.26
CAPN3-205ENST00000357568 ZNF692Q9BU19 519 aaPredicted RBP13.42□□□□□ -0.26
CAPN3-205ENST00000357568 C22orf23Q9BZE7 217 aa13.42□□□□□ -0.26
CAPN3-205ENST00000357568 ESPNB1AK53 854 aa13.41□□□□□ -0.26
CAPN3-205ENST00000357568 HDAC1Q13547 482 aaPredicted RBP13.41□□□□□ -0.26
CAPN3-205ENST00000357568 ADGRB2O60241 1585 aa13.41□□□□□ -0.26
CAPN3-205ENST00000357568 AMOTL2Q9Y2J4 779 aa13.41□□□□□ -0.26
CAPN3-205ENST00000357568 TMEM132EQ6IEE7 984 aa13.4□□□□□ -0.26
CAPN3-205ENST00000357568 HSCBQ8IWL3 235 aa13.4□□□□□ -0.26
CAPN3-205ENST00000357568 MVPQ14764 893 aaKnown RBP13.39□□□□□ -0.27
CAPN3-205ENST00000357568 IBTKQ9P2D0 1353 aaPredicted RBP13.39□□□□□ -0.27
CAPN3-205ENST00000357568 RBM25P49756 843 aaKnown RBP13.39□□□□□ -0.27
CAPN3-205ENST00000357568 SMC5Q8IY18 1101 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms