RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 SPDYE4A6NLX3 237 aa12.57□□□□□ -0.4
FXR1-202ENST00000357559 DIAPH1O60610 1272 aaKnown RBP12.57□□□□□ -0.4
FXR1-202ENST00000357559 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.57□□□□□ -0.4
FXR1-202ENST00000357559 SSBP05455 408 aaKnown RBP eCLIP12.57□□□□□ -0.4
FXR1-202ENST00000357559 LRRFIP2Q9Y608 721 aaKnown RBP12.57□□□□□ -0.4
FXR1-202ENST00000357559 ROCK1Q13464 1354 aa12.57□□□□□ -0.4
FXR1-202ENST00000357559 NUP133Q8WUM0 1156 aa12.56□□□□□ -0.4
FXR1-202ENST00000357559 C22orf23Q9BZE7 217 aa12.56□□□□□ -0.4
FXR1-202ENST00000357559 CNNM1Q9NRU3 951 aa12.56□□□□□ -0.4
FXR1-202ENST00000357559 GOLGA6L10A0A0M3HER8 536 aa12.56□□□□□ -0.4
FXR1-202ENST00000357559 PANK1Q8TE04 598 aa12.56□□□□□ -0.4
FXR1-202ENST00000357559 FIBPO43427 364 aa12.56□□□□□ -0.4
FXR1-202ENST00000357559 PUS7Q96PZ0 661 aaKnown RBP12.56□□□□□ -0.4
FXR1-202ENST00000357559 TBC1D2BQ9UPU7 963 aa12.56□□□□□ -0.4
FXR1-202ENST00000357559 CARMIL1Q5VZK9 1371 aa12.56□□□□□ -0.4
FXR1-202ENST00000357559 SIL1Q9H173 461 aa12.56□□□□□ -0.4
FXR1-202ENST00000357559 UBTFL1P0CB47 393 aaPredicted RBP12.56□□□□□ -0.4
FXR1-202ENST00000357559 EFCAB2Q5VUJ9 269 aa12.56□□□□□ -0.4
FXR1-202ENST00000357559 RAPGEF4Q8WZA2 1011 aa12.56□□□□□ -0.4
FXR1-202ENST00000357559 NF2P35240 595 aa12.55□□□□□ -0.4
FXR1-202ENST00000357559 SLC3A2P08195 630 aaKnown RBP12.55□□□□□ -0.4
FXR1-202ENST00000357559 ATF3P18847 181 aa12.55□□□□□ -0.4
FXR1-202ENST00000357559 ZNHIT6Q9NWK9 470 aaKnown RBP12.55□□□□□ -0.4
FXR1-202ENST00000357559 PRPF40AO75400 957 aaKnown RBP12.55□□□□□ -0.4
FXR1-202ENST00000357559 NUCB2P80303 420 aa12.54□□□□□ -0.4
FXR1-202ENST00000357559 NUTM2BA6NNL0 878 aaPredicted RBP12.54□□□□□ -0.4
FXR1-202ENST00000357559 NUTM2EB1AL46 878 aaPredicted RBP12.54□□□□□ -0.4
FXR1-202ENST00000357559 NUTM2AQ8IVF1 878 aaPredicted RBP12.54□□□□□ -0.4
FXR1-202ENST00000357559 PLCD3Q8N3E9 789 aa12.54□□□□□ -0.4
FXR1-202ENST00000357559 TSPY26PQ9H489 355 aa12.54□□□□□ -0.4
FXR1-202ENST00000357559 PSMA5P28066 241 aa12.54□□□□□ -0.4
FXR1-202ENST00000357559 RB1CC1Q8TDY2 1594 aa12.54□□□□□ -0.4
FXR1-202ENST00000357559 ZSCAN29Q8IWY8 852 aaPredicted RBP12.54□□□□□ -0.4
FXR1-202ENST00000357559 CCDC113Q9H0I3 377 aa12.54□□□□□ -0.4
FXR1-202ENST00000357559 NFKBIBQ15653 356 aa12.53□□□□□ -0.4
FXR1-202ENST00000357559 DYDC1Q8WWB3 177 aa12.53□□□□□ -0.4
FXR1-202ENST00000357559 EZRP15311 586 aaKnown RBP12.53□□□□□ -0.4
FXR1-202ENST00000357559 CARMIL2Q6F5E8 1435 aa12.53□□□□□ -0.4
FXR1-202ENST00000357559 PDE3BQ13370 1112 aa12.53□□□□□ -0.4
FXR1-202ENST00000357559 PHLDB1Q86UU1 1377 aa12.53□□□□□ -0.4
FXR1-202ENST00000357559 PPFIBP1Q86W92 1011 aa12.53□□□□□ -0.4
FXR1-202ENST00000357559 CCDC112Q8NEF3 446 aa12.52□□□□□ -0.4
FXR1-202ENST00000357559 USP5P45974 858 aa12.52□□□□□ -0.41
FXR1-202ENST00000357559 STK38Q15208 465 aa12.52□□□□□ -0.41
FXR1-202ENST00000357559 ABCC8Q09428 1581 aa12.52□□□□□ -0.41
FXR1-202ENST00000357559 CCDC69A6NI79 296 aa12.51□□□□□ -0.41
FXR1-202ENST00000357559 RBM25P49756 843 aaKnown RBP12.51□□□□□ -0.41
FXR1-202ENST00000357559 SERPINA10Q9UK55 444 aa12.51□□□□□ -0.41
FXR1-202ENST00000357559 MYL6BP14649 208 aa12.51□□□□□ -0.41
FXR1-202ENST00000357559 ZNF76P36508 570 aa12.51□□□□□ -0.41
FXR1-202ENST00000357559 CCDC144AA2RUR9 1427 aa12.51□□□□□ -0.41
FXR1-202ENST00000357559 TICAM2Q86XR7 235 aa12.5□□□□□ -0.41
FXR1-202ENST00000357559 GOLGA6L7A0A1B0GV03 622 aa12.5□□□□□ -0.41
FXR1-202ENST00000357559 ME1P48163 572 aa12.5□□□□□ -0.41
FXR1-202ENST00000357559 ANAPC15P60006 121 aa12.5□□□□□ -0.41
FXR1-202ENST00000357559 TMX1Q9H3N1 280 aa12.5□□□□□ -0.41
FXR1-202ENST00000357559 CCDC66A2RUB6 948 aa12.5□□□□□ -0.41
FXR1-202ENST00000357559 SF3B2Q13435 895 aaKnown RBP12.5□□□□□ -0.41
FXR1-202ENST00000357559 GOPCQ9HD26 462 aa12.5□□□□□ -0.41
FXR1-202ENST00000357559 SURF6O75683 361 aaKnown RBP12.5□□□□□ -0.41
FXR1-202ENST00000357559 API5Q9BZZ5 524 aaKnown RBP12.5□□□□□ -0.41
FXR1-202ENST00000357559 PAXIP1Q6ZW49 1069 aaPredicted RBP12.49□□□□□ -0.41
FXR1-202ENST00000357559 DNA2P51530 1060 aa12.49□□□□□ -0.41
FXR1-202ENST00000357559 NEK4P51957 841 aa12.49□□□□□ -0.41
FXR1-202ENST00000357559 CCDC102AQ96A19 550 aa12.49□□□□□ -0.41
FXR1-202ENST00000357559 FKBP4Q02790 459 aaKnown RBP eCLIP12.49□□□□□ -0.41
FXR1-202ENST00000357559 SCLT1Q96NL6 688 aa12.49□□□□□ -0.41
FXR1-202ENST00000357559 LRRCC1Q9C099 1032 aa12.48□□□□□ -0.41
FXR1-202ENST00000357559 STIM1Q13586 685 aa12.48□□□□□ -0.41
FXR1-202ENST00000357559 TNNT1P13805 278 aa12.48□□□□□ -0.41
FXR1-202ENST00000357559 KIAA1328Q86T90 577 aa12.48□□□□□ -0.41
FXR1-202ENST00000357559 BICDL1Q6ZP65 573 aa12.48□□□□□ -0.41
FXR1-202ENST00000357559 ZNF396Q96N95 335 aaPredicted RBP12.48□□□□□ -0.41
FXR1-202ENST00000357559 SOGA1O94964 1423 aa12.48□□□□□ -0.41
FXR1-202ENST00000357559 UBE4AQ14139 1066 aa12.48□□□□□ -0.41
FXR1-202ENST00000357559 CEP63Q96MT8 703 aa12.48□□□□□ -0.41
FXR1-202ENST00000357559 BCCIPQ9P287 314 aaKnown RBP eCLIP12.48□□□□□ -0.41
FXR1-202ENST00000357559 CDC45O75419 566 aa12.47□□□□□ -0.41
FXR1-202ENST00000357559 CFAP45Q9UL16 551 aa12.47□□□□□ -0.41
FXR1-202ENST00000357559 DDX54Q8TDD1 881 aaKnown RBP12.47□□□□□ -0.41
FXR1-202ENST00000357559 TNMDQ9H2S6 317 aa12.47□□□□□ -0.41
FXR1-202ENST00000357559 TRAK2O60296 914 aa12.47□□□□□ -0.41
FXR1-202ENST00000357559 WDR78Q5VTH9 848 aa12.47□□□□□ -0.41
FXR1-202ENST00000357559 CA8P35219 290 aa12.47□□□□□ -0.41
FXR1-202ENST00000357559 TRMT1LQ7Z2T5 733 aaKnown RBP12.47□□□□□ -0.41
FXR1-202ENST00000357559 ERC1Q8IUD2 1116 aa12.47□□□□□ -0.41
FXR1-202ENST00000357559 CABP2Q9NPB3 220 aa12.47□□□□□ -0.41
FXR1-202ENST00000357559 CCDC85AQ96PX6 553 aaPredicted RBP12.47□□□□□ -0.41
FXR1-202ENST00000357559 MAP2K1Q02750 393 aaPredicted RBP12.46□□□□□ -0.41
FXR1-202ENST00000357559 GIMAP7Q8NHV1 300 aa12.46□□□□□ -0.41
FXR1-202ENST00000357559 LIG1P18858 919 aa12.46□□□□□ -0.41
FXR1-202ENST00000357559 CCDC158Q5M9N0 1113 aa12.46□□□□□ -0.41
FXR1-202ENST00000357559 CCP110O43303 1012 aa12.46□□□□□ -0.41
FXR1-202ENST00000357559 SOGA3Q5TF21 947 aa12.46□□□□□ -0.41
FXR1-202ENST00000357559 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.46□□□□□ -0.41
FXR1-202ENST00000357559 DHX8Q14562 1220 aaKnown RBP12.46□□□□□ -0.42
FXR1-202ENST00000357559 TMEM87AQ8NBN3 555 aa12.46□□□□□ -0.42
FXR1-202ENST00000357559 PIP4K2BP78356 416 aa12.45□□□□□ -0.42
FXR1-202ENST00000357559 GGNBP2Q9H3C7 697 aa12.45□□□□□ -0.42
FXR1-202ENST00000357559 COMMD10Q9Y6G5 202 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms