RNA–Protein interactions for RNA: ENST00000356146.5

CDKL1-202, Transcript of cyclin dependent kinase like 1, humanhuman

TSL 1 (best)

Gene CDKL1, Length 2,982 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-202ENST00000356146 C22orf23Q9BZE7 217 aa17.32■□□□□ 0.36
CDKL1-202ENST00000356146 CHMP5Q9NZZ3 219 aa17.31■□□□□ 0.36
CDKL1-202ENST00000356146 TRIM35Q9UPQ4 493 aa17.31■□□□□ 0.36
CDKL1-202ENST00000356146 RSPH6AQ9H0K4 717 aa17.31■□□□□ 0.36
CDKL1-202ENST00000356146 SMC4Q9NTJ3 1288 aa17.31■□□□□ 0.36
CDKL1-202ENST00000356146 PNPLA6Q8IY17 1366 aa17.31■□□□□ 0.36
CDKL1-202ENST00000356146 MCM4P33991 863 aa17.31■□□□□ 0.36
CDKL1-202ENST00000356146 ATAD2Q6PL18 1390 aa17.3■□□□□ 0.36
CDKL1-202ENST00000356146 EXOSC9Q06265 439 aaKnown RBP17.3■□□□□ 0.36
CDKL1-202ENST00000356146 KIF16BQ96L93 1317 aa17.3■□□□□ 0.36
CDKL1-202ENST00000356146 BRPF1P55201 1214 aaPredicted RBP17.29■□□□□ 0.36
CDKL1-202ENST00000356146 SSH1Q8WYL5 1049 aa17.29■□□□□ 0.36
CDKL1-202ENST00000356146 PPIP5K1Q6PFW1 1433 aa17.29■□□□□ 0.36
CDKL1-202ENST00000356146 CFAP65Q6ZU64 1925 aaKnown RBP17.29■□□□□ 0.36
CDKL1-202ENST00000356146 ZBTB40Q9NUA8 1239 aa17.28■□□□□ 0.36
CDKL1-202ENST00000356146 ALDH1L2Q3SY69 923 aa17.28■□□□□ 0.36
CDKL1-202ENST00000356146 ZNF428Q96B54 188 aa17.28■□□□□ 0.36
CDKL1-202ENST00000356146 PNNQ9H307 717 aaKnown RBP17.28■□□□□ 0.36
CDKL1-202ENST00000356146 PTPRMP28827 1452 aa17.28■□□□□ 0.36
CDKL1-202ENST00000356146 CD163L1Q9NR16 1453 aa17.28■□□□□ 0.36
CDKL1-202ENST00000356146 RBM25P49756 843 aaKnown RBP17.27■□□□□ 0.36
CDKL1-202ENST00000356146 TSR2Q969E8 191 aaKnown RBP17.27■□□□□ 0.36
CDKL1-202ENST00000356146 IPO8O15397 1037 aaKnown RBP17.27■□□□□ 0.35
CDKL1-202ENST00000356146 SNX21Q969T3 373 aa17.27■□□□□ 0.35
CDKL1-202ENST00000356146 REREQ9P2R6 1566 aa17.26■□□□□ 0.35
CDKL1-202ENST00000356146 DDIT3P35638 169 aa17.26■□□□□ 0.35
CDKL1-202ENST00000356146 ISY1Q9ULR0 285 aaKnown RBP17.26■□□□□ 0.35
CDKL1-202ENST00000356146 PRKCSHP14314 528 aaPredicted RBP17.25■□□□□ 0.35
CDKL1-202ENST00000356146 ZNF692Q9BU19 519 aaPredicted RBP17.25■□□□□ 0.35
CDKL1-202ENST00000356146 NUCB1Q02818 461 aa17.25■□□□□ 0.35
CDKL1-202ENST00000356146 CABP2Q9NPB3 220 aa17.25■□□□□ 0.35
CDKL1-202ENST00000356146 KIF20BQ96Q89 1820 aa17.25■□□□□ 0.35
CDKL1-202ENST00000356146 ITPRIPQ8IWB1 547 aa17.25■□□□□ 0.35
CDKL1-202ENST00000356146 GOLGA6L3A6NEY3 463 aa17.24■□□□□ 0.35
CDKL1-202ENST00000356146 NEO1Q92859 1461 aa17.24■□□□□ 0.35
CDKL1-202ENST00000356146 TERF2IPQ9NYB0 399 aa17.24■□□□□ 0.35
CDKL1-202ENST00000356146 NOB1Q9ULX3 412 aaKnown RBP17.24■□□□□ 0.35
CDKL1-202ENST00000356146 DIP2CQ9Y2E4 1556 aa17.24■□□□□ 0.35
CDKL1-202ENST00000356146 PIK3R4Q99570 1358 aa17.24■□□□□ 0.35
CDKL1-202ENST00000356146 MFAP1P55081 439 aaKnown RBP17.23■□□□□ 0.35
CDKL1-202ENST00000356146 GGT6Q6P531 493 aa17.23■□□□□ 0.35
CDKL1-202ENST00000356146 DDX11L8A8MPP1 907 aa17.23■□□□□ 0.35
CDKL1-202ENST00000356146 HSCBQ8IWL3 235 aa17.23■□□□□ 0.35
CDKL1-202ENST00000356146 TMEM57Q8N5G2 664 aa17.23■□□□□ 0.35
CDKL1-202ENST00000356146 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.23■□□□□ 0.35
CDKL1-202ENST00000356146 CIZ1Q9ULV3 898 aaPredicted RBP17.22■□□□□ 0.35
CDKL1-202ENST00000356146 FYB1O15117 783 aa17.22■□□□□ 0.35
CDKL1-202ENST00000356146 TMEM131LA2VDJ0 1609 aa17.22■□□□□ 0.35
CDKL1-202ENST00000356146 XRCC6P12956 609 aaKnown RBP eCLIP17.22■□□□□ 0.35
CDKL1-202ENST00000356146 SLC52A1Q9NWF4 448 aa17.22■□□□□ 0.35
CDKL1-202ENST00000356146 CHMP4BQ9H444 224 aaKnown RBP17.21■□□□□ 0.35
CDKL1-202ENST00000356146 LRRC7Q96NW7 1537 aa17.21■□□□□ 0.35
CDKL1-202ENST00000356146 FAM135BQ49AJ0 1406 aa17.21■□□□□ 0.35
CDKL1-202ENST00000356146 U2SURPO15042 1029 aaKnown RBP17.21■□□□□ 0.35
CDKL1-202ENST00000356146 BMP2KLQ5H9B9 411 aa17.2■□□□□ 0.34
CDKL1-202ENST00000356146 PTCH1Q13635 1447 aa17.2■□□□□ 0.34
CDKL1-202ENST00000356146 TRAK2O60296 914 aa17.2■□□□□ 0.34
CDKL1-202ENST00000356146 DIAPH1O60610 1272 aaKnown RBP17.2■□□□□ 0.34
CDKL1-202ENST00000356146 FCHSD2O94868 740 aa17.2■□□□□ 0.34
CDKL1-202ENST00000356146 RIPK4P57078 832 aa17.2■□□□□ 0.34
CDKL1-202ENST00000356146 ARHGAP45Q92619 1136 aa17.19■□□□□ 0.34
CDKL1-202ENST00000356146 GGNBP2Q9H3C7 697 aa17.19■□□□□ 0.34
CDKL1-202ENST00000356146 ARHGEF40Q8TER5 1519 aa17.19■□□□□ 0.34
CDKL1-202ENST00000356146 RRAGDQ9NQL2 400 aaPredicted RBP17.19■□□□□ 0.34
CDKL1-202ENST00000356146 YTHDC2Q9H6S0 1430 aaKnown RBP17.18■□□□□ 0.34
CDKL1-202ENST00000356146 MRE11P49959 708 aa17.18■□□□□ 0.34
CDKL1-202ENST00000356146 PREX1Q8TCU6 1659 aa17.18■□□□□ 0.34
CDKL1-202ENST00000356146 CHD1LQ86WJ1 897 aa17.18■□□□□ 0.34
CDKL1-202ENST00000356146 SRPK2P78362 688 aaKnown RBP17.17■□□□□ 0.34
CDKL1-202ENST00000356146 GCC1Q96CN9 775 aa17.17■□□□□ 0.34
CDKL1-202ENST00000356146 MYO5BQ9ULV0 1848 aa17.17■□□□□ 0.34
CDKL1-202ENST00000356146 PTMSP20962 102 aa17.17■□□□□ 0.34
CDKL1-202ENST00000356146 IDI1Q13907 227 aa17.16■□□□□ 0.34
CDKL1-202ENST00000356146 ATP7BP35670 1465 aa17.16■□□□□ 0.34
CDKL1-202ENST00000356146 DLC1Q96QB1 1528 aa17.16■□□□□ 0.34
CDKL1-202ENST00000356146 CALD1Q05682 793 aaKnown RBP17.15■□□□□ 0.34
CDKL1-202ENST00000356146 HDGFL2Q7Z4V5 671 aaPredicted RBP17.15■□□□□ 0.34
CDKL1-202ENST00000356146 RICTORQ6R327 1708 aa17.14■□□□□ 0.33
CDKL1-202ENST00000356146 EIF5BO60841 1220 aaKnown RBP17.13■□□□□ 0.33
CDKL1-202ENST00000356146 CLCN1P35523 988 aa17.13■□□□□ 0.33
CDKL1-202ENST00000356146 ALKQ9UM73 1620 aa17.13■□□□□ 0.33
CDKL1-202ENST00000356146 ZBTB7BO15156 539 aaPredicted RBP17.13■□□□□ 0.33
CDKL1-202ENST00000356146 NPM1P06748 294 aaKnown RBP eCLIP17.13■□□□□ 0.33
CDKL1-202ENST00000356146 RAB3GAP1Q15042 981 aa17.13■□□□□ 0.33
CDKL1-202ENST00000356146 SPRYD3Q8NCJ5 442 aa17.13■□□□□ 0.33
CDKL1-202ENST00000356146 KIF24Q5T7B8 1368 aa17.12■□□□□ 0.33
CDKL1-202ENST00000356146 YEATS2Q9ULM3 1422 aa17.12■□□□□ 0.33
CDKL1-202ENST00000356146 KIF2CQ99661 725 aa17.12■□□□□ 0.33
CDKL1-202ENST00000356146 ABCC4O15439 1325 aa17.11■□□□□ 0.33
CDKL1-202ENST00000356146 SKOR2Q2VWA4 1001 aaPredicted RBP17.11■□□□□ 0.33
CDKL1-202ENST00000356146 MRPL50Q8N5N7 158 aaKnown RBP17.11■□□□□ 0.33
CDKL1-202ENST00000356146 LNPKQ9C0E8 428 aa17.11■□□□□ 0.33
CDKL1-202ENST00000356146 NUTM2DQ5VT03 806 aaPredicted RBP17.11■□□□□ 0.33
CDKL1-202ENST00000356146 GBP4Q96PP9 640 aa17.11■□□□□ 0.33
CDKL1-202ENST00000356146 PRAM1Q96QH2 718 aa17.11■□□□□ 0.33
CDKL1-202ENST00000356146 NFE2L2Q16236 605 aa17.1■□□□□ 0.33
CDKL1-202ENST00000356146 OSCARQ8IYS5 282 aa17.1■□□□□ 0.33
CDKL1-202ENST00000356146 CLEC17AQ6ZS10 378 aa17.1■□□□□ 0.33
CDKL1-202ENST00000356146 IFT57Q9NWB7 429 aa17.1■□□□□ 0.33
CDKL1-202ENST00000356146 CDK12Q9NYV4 1490 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms