RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 MLECQ14165 292 aa8.08□□□□□ -1.12
CD47-201ENST00000355354 ANKRD30AQ9BXX3 1397 aa8.07□□□□□ -1.12
CD47-201ENST00000355354 KIAA1551Q9HCM1 1747 aa8.07□□□□□ -1.12
CD47-201ENST00000355354 CICQ96RK0 1608 aaPredicted RBP8.07□□□□□ -1.12
CD47-201ENST00000355354 KCNA6P17658 529 aa8.07□□□□□ -1.12
CD47-201ENST00000355354 POLR3GLQ9BT43 218 aa8.07□□□□□ -1.12
CD47-201ENST00000355354 LY75O60449 1722 aa8.06□□□□□ -1.12
CD47-201ENST00000355354 KIF7Q2M1P5 1343 aa8.06□□□□□ -1.12
CD47-201ENST00000355354 C1orf167Q5SNV9 1468 aa8.06□□□□□ -1.12
CD47-201ENST00000355354 FAM208AQ9UK61 1670 aaKnown RBP8.06□□□□□ -1.12
CD47-201ENST00000355354 VIRMAQ69YN4 1812 aaKnown RBP8.05□□□□□ -1.12
CD47-201ENST00000355354 KIF3BO15066 747 aa8.05□□□□□ -1.12
CD47-201ENST00000355354 SEC24BO95487 1268 aa8.05□□□□□ -1.12
CD47-201ENST00000355354 NBR1Q14596 966 aa8.05□□□□□ -1.12
CD47-201ENST00000355354 MYOM1P52179 1685 aa8.05□□□□□ -1.12
CD47-201ENST00000355354 LAMA5O15230 3695 aa8.04□□□□□ -1.12
CD47-201ENST00000355354 THEMISQ8N1K5 641 aaPredicted RBP8.04□□□□□ -1.12
CD47-201ENST00000355354 PRRC2CQ9Y520 2896 aaKnown RBP8.04□□□□□ -1.12
CD47-201ENST00000355354 PRKRIP1Q9H875 184 aaPredicted RBP8.04□□□□□ -1.12
CD47-201ENST00000355354 NBEAQ8NFP9 2946 aa8.04□□□□□ -1.12
CD47-201ENST00000355354 PNPLA6Q8IY17 1366 aa8.04□□□□□ -1.12
CD47-201ENST00000355354 SLIT3O75094 1523 aa8.04□□□□□ -1.12
CD47-201ENST00000355354 ABCC6O95255 1503 aa8.04□□□□□ -1.12
CD47-201ENST00000355354 KDM2AQ9Y2K7 1162 aa8.04□□□□□ -1.12
CD47-201ENST00000355354 COL12A1Q99715 3063 aa8.03□□□□□ -1.12
CD47-201ENST00000355354 TBX22Q9Y458 520 aa8.03□□□□□ -1.12
CD47-201ENST00000355354 CUBNO60494 3623 aa8.03□□□□□ -1.12
CD47-201ENST00000355354 ZNF831Q5JPB2 1677 aa8.02□□□□□ -1.13
CD47-201ENST00000355354 WASHC2CQ9Y4E1 1318 aa8.02□□□□□ -1.13
CD47-201ENST00000355354 ANKLE2Q86XL3 938 aa8.02□□□□□ -1.13
CD47-201ENST00000355354 LTN1O94822 1766 aa8.02□□□□□ -1.13
CD47-201ENST00000355354 DISP2A7MBM2 1401 aa8.02□□□□□ -1.13
CD47-201ENST00000355354 CHAMP1Q96JM3 812 aa8.02□□□□□ -1.13
CD47-201ENST00000355354 ROBO2Q9HCK4 1378 aa8.02□□□□□ -1.13
CD47-201ENST00000355354 DISP3Q9P2K9 1392 aa8.02□□□□□ -1.13
CD47-201ENST00000355354 TAF1LQ8IZX4 1826 aa8.02□□□□□ -1.13
CD47-201ENST00000355354 RGL3Q3MIN7 710 aa8.01□□□□□ -1.13
CD47-201ENST00000355354 POTEAQ6S8J7 498 aa8.01□□□□□ -1.13
CD47-201ENST00000355354 SLC52A1Q9NWF4 448 aa8.01□□□□□ -1.13
CD47-201ENST00000355354 NHSQ6T4R5 1651 aa8.01□□□□□ -1.13
CD47-201ENST00000355354 TOGARAM1Q9Y4F4 1720 aa8□□□□□ -1.13
CD47-201ENST00000355354 KIF13BQ9NQT8 1826 aa8□□□□□ -1.13
CD47-201ENST00000355354 SOS2Q07890 1332 aaPredicted RBP8□□□□□ -1.13
CD47-201ENST00000355354 CENPBP07199 599 aaPredicted RBP8□□□□□ -1.13
CD47-201ENST00000355354 ST20-MTHFSA0A0A6YYL1 179 aa7.99□□□□□ -1.13
CD47-201ENST00000355354 ANP32EQ9BTT0 268 aa7.99□□□□□ -1.13
CD47-201ENST00000355354 GGT6Q6P531 493 aa7.99□□□□□ -1.13
CD47-201ENST00000355354 MPHOSPH9Q99550 1183 aa7.99□□□□□ -1.13
CD47-201ENST00000355354 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.99□□□□□ -1.13
CD47-201ENST00000355354 SSH2Q76I76 1423 aa7.98□□□□□ -1.13
CD47-201ENST00000355354 TULP4Q9NRJ4 1543 aa7.98□□□□□ -1.13
CD47-201ENST00000355354 RGPD2P0DJD1 1756 aa7.98□□□□□ -1.13
CD47-201ENST00000355354 JCADQ9P266 1359 aa7.98□□□□□ -1.13
CD47-201ENST00000355354 BRCA1P38398 1863 aaKnown RBP7.98□□□□□ -1.13
CD47-201ENST00000355354 EXOC6Q8TAG9 804 aa7.98□□□□□ -1.13
CD47-201ENST00000355354 RELNP78509 3460 aa7.98□□□□□ -1.13
CD47-201ENST00000355354 PER1O15534 1290 aaPredicted RBP7.98□□□□□ -1.13
CD47-201ENST00000355354 ATP7BP35670 1465 aa7.98□□□□□ -1.13
CD47-201ENST00000355354 ADAMTS7Q9UKP4 1686 aa7.97□□□□□ -1.13
CD47-201ENST00000355354 MAP2P11137 1827 aaKnown RBP7.97□□□□□ -1.13
CD47-201ENST00000355354 DCAF11Q8TEB1 546 aa7.97□□□□□ -1.13
CD47-201ENST00000355354 NFAT5O94916 1531 aa7.97□□□□□ -1.13
CD47-201ENST00000355354 ZNF777Q9ULD5 760 aaPredicted RBP7.97□□□□□ -1.13
CD47-201ENST00000355354 AK9Q5TCS8 1911 aa7.96□□□□□ -1.14
CD47-201ENST00000355354 SPATA31A6Q5VVP1 1343 aa7.96□□□□□ -1.14
CD47-201ENST00000355354 PKD1L3Q7Z443 1732 aa7.95□□□□□ -1.14
CD47-201ENST00000355354 NUTM2DQ5VT03 806 aaPredicted RBP7.95□□□□□ -1.14
CD47-201ENST00000355354 BRINP3Q76B58 766 aa7.94□□□□□ -1.14
CD47-201ENST00000355354 RBAK-RBAKDNI3L0D1 243 aa7.94□□□□□ -1.14
CD47-201ENST00000355354 PNISRQ8TF01 805 aaKnown RBP7.93□□□□□ -1.14
CD47-201ENST00000355354 COL9A3Q14050 684 aaPredicted RBP7.93□□□□□ -1.14
CD47-201ENST00000355354 ABCC11Q96J66 1382 aa7.93□□□□□ -1.14
CD47-201ENST00000355354 ANKRD30BQ9BXX2 1392 aa7.93□□□□□ -1.14
CD47-201ENST00000355354 ANKARQ7Z5J8 1434 aa7.93□□□□□ -1.14
CD47-201ENST00000355354 UBAP1LF5GYI3 381 aa7.92□□□□□ -1.14
CD47-201ENST00000355354 CD163L1Q9NR16 1453 aa7.92□□□□□ -1.14
CD47-201ENST00000355354 ONECUT3O60422 494 aaPredicted RBP7.92□□□□□ -1.14
CD47-201ENST00000355354 TOM1O60784 492 aa7.91□□□□□ -1.14
CD47-201ENST00000355354 SIRT1Q96EB6 747 aa7.91□□□□□ -1.14
CD47-201ENST00000355354 TESK2Q96S53 571 aa7.91□□□□□ -1.14
CD47-201ENST00000355354 BRPF3Q9ULD4 1205 aa7.91□□□□□ -1.14
CD47-201ENST00000355354 COL5A3P25940 1745 aaPredicted RBP7.91□□□□□ -1.14
CD47-201ENST00000355354 FNBP4Q8N3X1 1017 aaPredicted RBP7.91□□□□□ -1.14
CD47-201ENST00000355354 DMXL2Q8TDJ6 3036 aa7.91□□□□□ -1.14
CD47-201ENST00000355354 DMXL1Q9Y485 3027 aa7.9□□□□□ -1.14
CD47-201ENST00000355354 LRPPRCP42704 1394 aaKnown RBP7.9□□□□□ -1.14
CD47-201ENST00000355354 KIF20BQ96Q89 1820 aa7.9□□□□□ -1.14
CD47-201ENST00000355354 ZNF428Q96B54 188 aa7.9□□□□□ -1.14
CD47-201ENST00000355354 PDE4DIPQ5VU43 2346 aa7.9□□□□□ -1.14
CD47-201ENST00000355354 BCL9O00512 1426 aa7.9□□□□□ -1.14
CD47-201ENST00000355354 PLEKHH1Q9ULM0 1364 aa7.9□□□□□ -1.15
CD47-201ENST00000355354 LAS1LQ9Y4W2 734 aaKnown RBP7.9□□□□□ -1.15
CD47-201ENST00000355354 NUP155O75694 1391 aa7.9□□□□□ -1.15
CD47-201ENST00000355354 KANK1Q14678 1352 aa7.89□□□□□ -1.15
CD47-201ENST00000355354 MRS2Q9HD23 443 aa7.89□□□□□ -1.15
CD47-201ENST00000355354 BTAF1O14981 1849 aa7.89□□□□□ -1.15
CD47-201ENST00000355354 RALGAPBQ86X10 1494 aa7.89□□□□□ -1.15
CD47-201ENST00000355354 ITGB4P16144 1822 aa7.88□□□□□ -1.15
CD47-201ENST00000355354 APLP2Q06481 763 aa7.88□□□□□ -1.15
CD47-201ENST00000355354 TXNDC2Q86VQ3 553 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms