RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 NOB1Q9ULX3 412 aaKnown RBP15.87■□□□□ 0.13
SCN8A-202ENST00000355133 SULT6B1Q6IMI4 303 aa15.87■□□□□ 0.13
SCN8A-202ENST00000355133 SLC12A5Q9H2X9 1139 aa15.87■□□□□ 0.13
SCN8A-202ENST00000355133 SLC4A2P04920 1241 aa15.87■□□□□ 0.13
SCN8A-202ENST00000355133 RSPH6AQ9H0K4 717 aa15.87■□□□□ 0.13
SCN8A-202ENST00000355133 PPP1R1BQ9UD71 204 aaPredicted RBP15.87■□□□□ 0.13
SCN8A-202ENST00000355133 CABP1Q9NZU7 370 aa15.86■□□□□ 0.13
SCN8A-202ENST00000355133 R3HCC1Q9Y3T6 440 aaKnown RBP15.86■□□□□ 0.13
SCN8A-202ENST00000355133 FANCIQ9NVI1 1328 aa15.86■□□□□ 0.13
SCN8A-202ENST00000355133 STK11IPQ8N1F8 1099 aa15.86■□□□□ 0.13
SCN8A-202ENST00000355133 KIF21BO75037 1637 aa15.86■□□□□ 0.13
SCN8A-202ENST00000355133 CABP4P57796 275 aa15.86■□□□□ 0.13
SCN8A-202ENST00000355133 GNAI2P04899 355 aa15.85■□□□□ 0.13
SCN8A-202ENST00000355133 ODF2Q5BJF6 829 aa15.85■□□□□ 0.13
SCN8A-202ENST00000355133 HDGFL1Q5TGJ6 251 aa15.85■□□□□ 0.13
SCN8A-202ENST00000355133 KRI1Q8N9T8 703 aaKnown RBP15.85■□□□□ 0.13
SCN8A-202ENST00000355133 PDZRN3Q9UPQ7 1066 aa15.85■□□□□ 0.13
SCN8A-202ENST00000355133 NEK4P51957 841 aa15.85■□□□□ 0.13
SCN8A-202ENST00000355133 SIL1Q9H173 461 aa15.85■□□□□ 0.13
SCN8A-202ENST00000355133 TOM1L2Q6ZVM7 507 aa15.85■□□□□ 0.13
SCN8A-202ENST00000355133 OFD1O75665 1012 aa15.85■□□□□ 0.13
SCN8A-202ENST00000355133 ZNF771Q7L3S4 317 aaPredicted RBP15.85■□□□□ 0.13
SCN8A-202ENST00000355133 RNF214Q8ND24 703 aa15.85■□□□□ 0.13
SCN8A-202ENST00000355133 NAT10Q9H0A0 1025 aaKnown RBP15.84■□□□□ 0.13
SCN8A-202ENST00000355133 CASKIN1Q8WXD9 1431 aa15.84■□□□□ 0.13
SCN8A-202ENST00000355133 CCDC158Q5M9N0 1113 aa15.84■□□□□ 0.13
SCN8A-202ENST00000355133 ZFYVE27Q5T4F4 411 aa15.84■□□□□ 0.13
SCN8A-202ENST00000355133 FAM13BQ9NYF5 915 aa15.84■□□□□ 0.13
SCN8A-202ENST00000355133 PRG4Q92954 1404 aaPredicted RBP15.84■□□□□ 0.13
SCN8A-202ENST00000355133 MYL6BP14649 208 aa15.83■□□□□ 0.12
SCN8A-202ENST00000355133 MNS1Q8NEH6 495 aa15.83■□□□□ 0.12
SCN8A-202ENST00000355133 SLC3A2P08195 630 aaKnown RBP15.83■□□□□ 0.12
SCN8A-202ENST00000355133 TTLL5Q6EMB2 1281 aa15.83■□□□□ 0.12
SCN8A-202ENST00000355133 ZNF530Q6P9A1 599 aaPredicted RBP15.83■□□□□ 0.12
SCN8A-202ENST00000355133 ERC1Q8IUD2 1116 aa15.83■□□□□ 0.12
SCN8A-202ENST00000355133 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.83■□□□□ 0.12
SCN8A-202ENST00000355133 MAP4K4O95819 1239 aaPredicted RBP15.82■□□□□ 0.12
SCN8A-202ENST00000355133 ATP2B2Q01814 1243 aa15.82■□□□□ 0.12
SCN8A-202ENST00000355133 CEBPZQ03701 1054 aaKnown RBP15.82■□□□□ 0.12
SCN8A-202ENST00000355133 SYNJ2O15056 1496 aa15.82■□□□□ 0.12
SCN8A-202ENST00000355133 BCAR3O75815 825 aa15.82■□□□□ 0.12
SCN8A-202ENST00000355133 HIP1O00291 1037 aa15.82■□□□□ 0.12
SCN8A-202ENST00000355133 THEMISQ8N1K5 641 aaPredicted RBP15.82■□□□□ 0.12
SCN8A-202ENST00000355133 TMEM132AQ24JP5 1023 aa15.81■□□□□ 0.12
SCN8A-202ENST00000355133 RUFY1Q96T51 708 aa15.81■□□□□ 0.12
SCN8A-202ENST00000355133 NFKBIBQ15653 356 aa15.81■□□□□ 0.12
SCN8A-202ENST00000355133 CDK5RAP3Q96JB5 506 aa15.81■□□□□ 0.12
SCN8A-202ENST00000355133 GNL3LQ9NVN8 582 aaKnown RBP15.81■□□□□ 0.12
SCN8A-202ENST00000355133 FMNL2Q96PY5 1086 aa15.8■□□□□ 0.12
SCN8A-202ENST00000355133 CFTRP13569 1480 aa15.8■□□□□ 0.12
SCN8A-202ENST00000355133 STK3Q13188 491 aa15.79■□□□□ 0.12
SCN8A-202ENST00000355133 CAVIN1Q6NZI2 390 aaKnown RBP15.79■□□□□ 0.12
SCN8A-202ENST00000355133 SLC26A8Q96RN1 970 aa15.79■□□□□ 0.12
SCN8A-202ENST00000355133 GRIN2BQ13224 1484 aa15.79■□□□□ 0.12
SCN8A-202ENST00000355133 HSP90AB2PQ58FF8 381 aa15.79■□□□□ 0.12
SCN8A-202ENST00000355133 GCC1Q96CN9 775 aa15.79■□□□□ 0.12
SCN8A-202ENST00000355133 SCAPERQ9BY12 1400 aa15.79■□□□□ 0.12
SCN8A-202ENST00000355133 KINO60870 393 aaKnown RBP15.79■□□□□ 0.12
SCN8A-202ENST00000355133 TEX35Q5T0J7 233 aa15.79■□□□□ 0.12
SCN8A-202ENST00000355133 CCAR1Q8IX12 1150 aaKnown RBP15.79■□□□□ 0.12
SCN8A-202ENST00000355133 ZNF692Q9BU19 519 aaPredicted RBP15.79■□□□□ 0.12
SCN8A-202ENST00000355133 SPG7Q9UQ90 795 aa15.79■□□□□ 0.12
SCN8A-202ENST00000355133 SMC2O95347 1197 aa15.78■□□□□ 0.12
SCN8A-202ENST00000355133 FAM43AQ8N2R8 423 aa15.78■□□□□ 0.12
SCN8A-202ENST00000355133 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.78■□□□□ 0.12
SCN8A-202ENST00000355133 PRPF40AO75400 957 aaKnown RBP15.78■□□□□ 0.12
SCN8A-202ENST00000355133 NASPP49321 788 aaPredicted RBP15.78■□□□□ 0.12
SCN8A-202ENST00000355133 XPCQ01831 940 aaPredicted RBP15.78■□□□□ 0.12
SCN8A-202ENST00000355133 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.78■□□□□ 0.12
SCN8A-202ENST00000355133 CAGE1Q8TC20 777 aa15.78■□□□□ 0.12
SCN8A-202ENST00000355133 SRCIN1Q9C0H9 1055 aa15.78■□□□□ 0.12
SCN8A-202ENST00000355133 BRPF1P55201 1214 aaPredicted RBP15.78■□□□□ 0.12
SCN8A-202ENST00000355133 RRS1Q15050 365 aaKnown RBP15.78■□□□□ 0.12
SCN8A-202ENST00000355133 TRIM5Q9C035 493 aa15.78■□□□□ 0.12
SCN8A-202ENST00000355133 FIBPO43427 364 aa15.78■□□□□ 0.12
SCN8A-202ENST00000355133 KRT18P05783 430 aaKnown RBP15.78■□□□□ 0.12
SCN8A-202ENST00000355133 CCT4P50991 539 aaKnown RBP15.77■□□□□ 0.12
SCN8A-202ENST00000355133 STK38Q15208 465 aa15.77■□□□□ 0.12
SCN8A-202ENST00000355133 AK7Q96M32 723 aa15.77■□□□□ 0.12
SCN8A-202ENST00000355133 LRRCC1Q9C099 1032 aa15.77■□□□□ 0.12
SCN8A-202ENST00000355133 RTEL1-TNFRSF6BF6WH68 1400 aa15.76■□□□□ 0.11
SCN8A-202ENST00000355133 PNISRQ8TF01 805 aaKnown RBP15.76■□□□□ 0.11
SCN8A-202ENST00000355133 C9orf84Q5VXU9 1444 aa15.76■□□□□ 0.11
SCN8A-202ENST00000355133 TXLNAP40222 546 aa15.76■□□□□ 0.11
SCN8A-202ENST00000355133 RABEP1Q15276 862 aa15.76■□□□□ 0.11
SCN8A-202ENST00000355133 ARGLU1Q9NWB6 273 aaPredicted RBP15.76■□□□□ 0.11
SCN8A-202ENST00000355133 ZNF396Q96N95 335 aaPredicted RBP15.76■□□□□ 0.11
SCN8A-202ENST00000355133 RAPGEF3O95398 923 aa15.75■□□□□ 0.11
SCN8A-202ENST00000355133 SF3B2Q13435 895 aaKnown RBP15.75■□□□□ 0.11
SCN8A-202ENST00000355133 MPHOSPH8Q99549 860 aa15.75■□□□□ 0.11
SCN8A-202ENST00000355133 CCDC39Q9UFE4 941 aa15.75■□□□□ 0.11
SCN8A-202ENST00000355133 DCAF8L1A6NGE4 600 aa15.75■□□□□ 0.11
SCN8A-202ENST00000355133 PDCP20941 246 aa15.75■□□□□ 0.11
SCN8A-202ENST00000355133 TRAK2O60296 914 aa15.75■□□□□ 0.11
SCN8A-202ENST00000355133 RBM5P52756 815 aaKnown RBP eCLIP15.75■□□□□ 0.11
SCN8A-202ENST00000355133 PIP4K2BP78356 416 aa15.75■□□□□ 0.11
SCN8A-202ENST00000355133 FKBP4Q02790 459 aaKnown RBP eCLIP15.75■□□□□ 0.11
SCN8A-202ENST00000355133 CCDC57Q2TAC2 916 aa15.75■□□□□ 0.11
SCN8A-202ENST00000355133 MAGEC2Q9UBF1 373 aaPredicted RBP15.75■□□□□ 0.11
SCN8A-202ENST00000355133 CYP46A1Q9Y6A2 500 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms