RNA–Protein interactions for RNA: ENST00000354530.2

CTSL3P-201, Transcript of cathepsin L family member 3, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene CTSL3P, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3P-201ENST00000354530 LRP5O75197 1615 aa10.71□□□□□ -0.69
CTSL3P-201ENST00000354530 NEUROD1Q13562 356 aa10.71□□□□□ -0.69
CTSL3P-201ENST00000354530 ZRANB1Q9UGI0 708 aa10.71□□□□□ -0.69
CTSL3P-201ENST00000354530 SF3B2Q13435 895 aaKnown RBP10.7□□□□□ -0.7
CTSL3P-201ENST00000354530 TNS1Q9HBL0 1735 aaKnown RBP10.69□□□□□ -0.7
CTSL3P-201ENST00000354530 VPS72Q15906 364 aa10.68□□□□□ -0.7
CTSL3P-201ENST00000354530 PMFBP1Q8TBY8 1022 aa10.68□□□□□ -0.7
CTSL3P-201ENST00000354530 THSD7AQ9UPZ6 1657 aa10.68□□□□□ -0.7
CTSL3P-201ENST00000354530 WASLO00401 505 aaPredicted RBP10.67□□□□□ -0.7
CTSL3P-201ENST00000354530 LMOD2Q6P5Q4 547 aa10.67□□□□□ -0.7
CTSL3P-201ENST00000354530 CABLES1Q8TDN4 633 aa10.66□□□□□ -0.7
CTSL3P-201ENST00000354530 CCDC9Q9Y3X0 531 aaKnown RBP10.66□□□□□ -0.7
CTSL3P-201ENST00000354530 WNK3Q9BYP7 1800 aa10.65□□□□□ -0.7
CTSL3P-201ENST00000354530 CDK19Q9BWU1 502 aa10.64□□□□□ -0.71
CTSL3P-201ENST00000354530 AKAP12Q02952 1782 aa10.64□□□□□ -0.71
CTSL3P-201ENST00000354530 RGPD3A6NKT7 1758 aaPredicted RBP10.63□□□□□ -0.71
CTSL3P-201ENST00000354530 RGPD4Q7Z3J3 1758 aa10.63□□□□□ -0.71
CTSL3P-201ENST00000354530 A0A0G2JS52 829 aa10.63□□□□□ -0.71
CTSL3P-201ENST00000354530 PLEKHG5O94827 1062 aa10.63□□□□□ -0.71
CTSL3P-201ENST00000354530 MYT1Q01538 1121 aa10.63□□□□□ -0.71
CTSL3P-201ENST00000354530 KRT27Q7Z3Y8 459 aa10.63□□□□□ -0.71
CTSL3P-201ENST00000354530 SEPT12Q8IYM1 358 aa10.63□□□□□ -0.71
CTSL3P-201ENST00000354530 NGDNQ8NEJ9 315 aaKnown RBP10.63□□□□□ -0.71
CTSL3P-201ENST00000354530 NUDT16Q96DE0 195 aaKnown RBP10.63□□□□□ -0.71
CTSL3P-201ENST00000354530 PCGF6Q9BYE7 350 aa10.63□□□□□ -0.71
CTSL3P-201ENST00000354530 NRKQ7Z2Y5 1582 aa10.63□□□□□ -0.71
CTSL3P-201ENST00000354530 PARP4Q9UKK3 1724 aaKnown RBP10.63□□□□□ -0.71
CTSL3P-201ENST00000354530 CENPJQ9HC77 1338 aaPredicted RBP10.62□□□□□ -0.71
CTSL3P-201ENST00000354530 ONECUT3O60422 494 aaPredicted RBP10.62□□□□□ -0.71
CTSL3P-201ENST00000354530 PIK3C2AO00443 1686 aa10.62□□□□□ -0.71
CTSL3P-201ENST00000354530 RREB1Q92766 1687 aa10.62□□□□□ -0.71
CTSL3P-201ENST00000354530 POLR3AO14802 1390 aaPredicted RBP10.62□□□□□ -0.71
CTSL3P-201ENST00000354530 SBF2Q86WG5 1849 aa10.61□□□□□ -0.71
CTSL3P-201ENST00000354530 BAG6P46379 1132 aa10.61□□□□□ -0.71
CTSL3P-201ENST00000354530 CABP2Q9NPB3 220 aa10.61□□□□□ -0.71
CTSL3P-201ENST00000354530 BRD4O60885 1362 aaPredicted RBP10.61□□□□□ -0.71
CTSL3P-201ENST00000354530 ROCK2O75116 1388 aaKnown RBP10.61□□□□□ -0.71
CTSL3P-201ENST00000354530 LMO7Q8WWI1 1683 aa10.6□□□□□ -0.71
CTSL3P-201ENST00000354530 BTG4Q9NY30 223 aa10.6□□□□□ -0.71
CTSL3P-201ENST00000354530 CD163L1Q9NR16 1453 aa10.6□□□□□ -0.71
CTSL3P-201ENST00000354530 DISP2A7MBM2 1401 aa10.59□□□□□ -0.71
CTSL3P-201ENST00000354530 PPIP5K1Q6PFW1 1433 aa10.59□□□□□ -0.71
CTSL3P-201ENST00000354530 PAK3O75914 559 aaPredicted RBP10.59□□□□□ -0.71
CTSL3P-201ENST00000354530 PRDM11Q9NQV5 511 aa10.59□□□□□ -0.71
CTSL3P-201ENST00000354530 ACEP12821 1306 aa10.58□□□□□ -0.71
CTSL3P-201ENST00000354530 SSH2Q76I76 1423 aa10.58□□□□□ -0.72
CTSL3P-201ENST00000354530 PARD3Q8TEW0 1356 aa10.58□□□□□ -0.72
CTSL3P-201ENST00000354530 FAM83GA6ND36 823 aa10.58□□□□□ -0.72
CTSL3P-201ENST00000354530 NUP188Q5SRE5 1749 aa10.58□□□□□ -0.72
CTSL3P-201ENST00000354530 MON2Q7Z3U7 1717 aa10.58□□□□□ -0.72
CTSL3P-201ENST00000354530 SPATA31A5Q5VU36 1347 aa10.58□□□□□ -0.72
CTSL3P-201ENST00000354530 SPATA31A7Q8IWB4 1347 aa10.58□□□□□ -0.72
CTSL3P-201ENST00000354530 PLEKHG3A1L390 1219 aa10.57□□□□□ -0.72
CTSL3P-201ENST00000354530 FAM98CQ17RN3 349 aaKnown RBP10.57□□□□□ -0.72
CTSL3P-201ENST00000354530 NUTM2GQ5VZR2 741 aa10.57□□□□□ -0.72
CTSL3P-201ENST00000354530 RGPD5Q99666 1765 aa10.57□□□□□ -0.72
CTSL3P-201ENST00000354530 TONSLQ96HA7 1378 aa10.56□□□□□ -0.72
CTSL3P-201ENST00000354530 CCDC61Q9Y6R9 512 aa10.56□□□□□ -0.72
CTSL3P-201ENST00000354530 CPDO75976 1380 aa10.55□□□□□ -0.72
CTSL3P-201ENST00000354530 KIAA0232Q92628 1395 aa10.55□□□□□ -0.72
CTSL3P-201ENST00000354530 COL18A1P39060 1754 aa10.55□□□□□ -0.72
CTSL3P-201ENST00000354530 C11orf95C9JLR9 678 aaPredicted RBP10.55□□□□□ -0.72
CTSL3P-201ENST00000354530 USP6P35125 1406 aa10.55□□□□□ -0.72
CTSL3P-201ENST00000354530 LTN1O94822 1766 aa10.54□□□□□ -0.72
CTSL3P-201ENST00000354530 SLIT3O75094 1523 aa10.54□□□□□ -0.72
CTSL3P-201ENST00000354530 ABCC6O95255 1503 aa10.54□□□□□ -0.72
CTSL3P-201ENST00000354530 MYOM1P52179 1685 aa10.54□□□□□ -0.72
CTSL3P-201ENST00000354530 USP54Q70EL1 1684 aa10.54□□□□□ -0.72
CTSL3P-201ENST00000354530 CPSF1Q10570 1443 aaKnown RBP10.54□□□□□ -0.72
CTSL3P-201ENST00000354530 DEFB132Q7Z7B7 95 aa10.54□□□□□ -0.72
CTSL3P-201ENST00000354530 TESK2Q96S53 571 aa10.54□□□□□ -0.72
CTSL3P-201ENST00000354530 CABP1Q9NZU7 370 aa10.54□□□□□ -0.72
CTSL3P-201ENST00000354530 LRRC37A3O60309 1634 aa10.54□□□□□ -0.72
CTSL3P-201ENST00000354530 USP19O94966 1318 aa10.54□□□□□ -0.72
CTSL3P-201ENST00000354530 SPATA31A1Q5TZJ5 1347 aa10.54□□□□□ -0.72
CTSL3P-201ENST00000354530 CAMTA1Q9Y6Y1 1673 aa10.53□□□□□ -0.72
CTSL3P-201ENST00000354530 SBNO2Q9Y2G9 1366 aa10.53□□□□□ -0.72
CTSL3P-201ENST00000354530 KAT6BQ8WYB5 2073 aa10.53□□□□□ -0.72
CTSL3P-201ENST00000354530 SRPK2P78362 688 aaKnown RBP10.53□□□□□ -0.72
CTSL3P-201ENST00000354530 FAM196AQ6ZSG2 479 aa10.53□□□□□ -0.72
CTSL3P-201ENST00000354530 SRCAPQ6ZRS2 3230 aa10.52□□□□□ -0.72
CTSL3P-201ENST00000354530 EVA1CP58658 441 aa10.52□□□□□ -0.73
CTSL3P-201ENST00000354530 CHRNA2Q15822 529 aa10.52□□□□□ -0.73
CTSL3P-201ENST00000354530 BARGINQ6ZT62 677 aa10.52□□□□□ -0.73
CTSL3P-201ENST00000354530 NLRP13Q86W25 1043 aa10.52□□□□□ -0.73
CTSL3P-201ENST00000354530 CARD11Q9BXL7 1154 aa10.52□□□□□ -0.73
CTSL3P-201ENST00000354530 THRAP3Q9Y2W1 955 aaKnown RBP10.52□□□□□ -0.73
CTSL3P-201ENST00000354530 FAM208AQ9UK61 1670 aaKnown RBP10.52□□□□□ -0.73
CTSL3P-201ENST00000354530 PEAK1Q9H792 1746 aa10.52□□□□□ -0.73
CTSL3P-201ENST00000354530 NFAT5O94916 1531 aa10.52□□□□□ -0.73
CTSL3P-201ENST00000354530 ABTB2Q8N961 1025 aa10.51□□□□□ -0.73
CTSL3P-201ENST00000354530 COL5A2P05997 1499 aaPredicted RBP10.5□□□□□ -0.73
CTSL3P-201ENST00000354530 PDE3BQ13370 1112 aa10.5□□□□□ -0.73
CTSL3P-201ENST00000354530 STRN4Q9NRL3 753 aa10.5□□□□□ -0.73
CTSL3P-201ENST00000354530 CLSPNQ9HAW4 1339 aa10.5□□□□□ -0.73
CTSL3P-201ENST00000354530 CRB1P82279 1406 aa10.5□□□□□ -0.73
CTSL3P-201ENST00000354530 ST20-MTHFSA0A0A6YYL1 179 aa10.49□□□□□ -0.73
CTSL3P-201ENST00000354530 ZC3H6P61129 1189 aaKnown RBP10.49□□□□□ -0.73
CTSL3P-201ENST00000354530 EVC2Q86UK5 1308 aa10.49□□□□□ -0.73
CTSL3P-201ENST00000354530 OVOS2A0A0G2JMS6 1433 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms