RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 CCDC88BA6NC98 1476 aa11.98□□□□□ -0.49
COL11A1-201ENST00000353414 CCDC18Q5T9S5 1454 aa11.98□□□□□ -0.49
COL11A1-201ENST00000353414 SSR1P43307 286 aaKnown RBP11.98□□□□□ -0.49
COL11A1-201ENST00000353414 E9PSI1 815 aa11.98□□□□□ -0.49
COL11A1-201ENST00000353414 CENPHQ9H3R5 247 aa11.98□□□□□ -0.49
COL11A1-201ENST00000353414 TSHZ2Q9NRE2 1034 aa11.98□□□□□ -0.49
COL11A1-201ENST00000353414 FKBP4Q02790 459 aaKnown RBP eCLIP11.98□□□□□ -0.49
COL11A1-201ENST00000353414 MAGEC2Q9UBF1 373 aaPredicted RBP11.98□□□□□ -0.49
COL11A1-201ENST00000353414 XBP1P17861 261 aa11.98□□□□□ -0.49
COL11A1-201ENST00000353414 RRP1P56182 461 aaKnown RBP11.97□□□□□ -0.49
COL11A1-201ENST00000353414 PROSER2Q86WR7 435 aaPredicted RBP11.97□□□□□ -0.49
COL11A1-201ENST00000353414 RSPH6AQ9H0K4 717 aa11.97□□□□□ -0.49
COL11A1-201ENST00000353414 ERC2O15083 957 aa11.97□□□□□ -0.49
COL11A1-201ENST00000353414 NEBLO76041 1014 aa11.97□□□□□ -0.49
COL11A1-201ENST00000353414 CABP4P57796 275 aa11.97□□□□□ -0.49
COL11A1-201ENST00000353414 PTPRGP23470 1445 aa11.97□□□□□ -0.49
COL11A1-201ENST00000353414 SURF6O75683 361 aaKnown RBP11.97□□□□□ -0.49
COL11A1-201ENST00000353414 CCDC173Q0VFZ6 552 aa11.96□□□□□ -0.49
COL11A1-201ENST00000353414 INTS3Q68E01 1043 aaKnown RBP11.96□□□□□ -0.49
COL11A1-201ENST00000353414 ENOX2Q16206 610 aaKnown RBP11.96□□□□□ -0.49
COL11A1-201ENST00000353414 HSP90AB3PQ58FF7 597 aa11.96□□□□□ -0.49
COL11A1-201ENST00000353414 MROH2BQ7Z745 1585 aa11.96□□□□□ -0.5
COL11A1-201ENST00000353414 FAM193AP78312 1265 aa11.95□□□□□ -0.5
COL11A1-201ENST00000353414 SEPT7Q16181 437 aaKnown RBP11.95□□□□□ -0.5
COL11A1-201ENST00000353414 CNTROBQ8N137 903 aa11.95□□□□□ -0.5
COL11A1-201ENST00000353414 UACAQ9BZF9 1416 aa11.95□□□□□ -0.5
COL11A1-201ENST00000353414 DDX19BQ9UMR2 479 aa11.95□□□□□ -0.5
COL11A1-201ENST00000353414 LIG1P18858 919 aa11.95□□□□□ -0.5
COL11A1-201ENST00000353414 ZNF76P36508 570 aa11.94□□□□□ -0.5
COL11A1-201ENST00000353414 RSPH4AQ5TD94 716 aa11.94□□□□□ -0.5
COL11A1-201ENST00000353414 SLC3A2P08195 630 aaKnown RBP11.94□□□□□ -0.5
COL11A1-201ENST00000353414 SART3Q15020 963 aaKnown RBP11.94□□□□□ -0.5
COL11A1-201ENST00000353414 TAX1BP1Q86VP1 789 aa11.94□□□□□ -0.5
COL11A1-201ENST00000353414 SCLT1Q96NL6 688 aa11.94□□□□□ -0.5
COL11A1-201ENST00000353414 AQRO60306 1485 aaKnown RBP eCLIP11.94□□□□□ -0.5
COL11A1-201ENST00000353414 TXNDC2Q86VQ3 553 aa11.94□□□□□ -0.5
COL11A1-201ENST00000353414 TMEM87AQ8NBN3 555 aa11.93□□□□□ -0.5
COL11A1-201ENST00000353414 ADAMTS2O95450 1211 aa11.93□□□□□ -0.5
COL11A1-201ENST00000353414 H0YHG0 523 aa11.92□□□□□ -0.5
COL11A1-201ENST00000353414 NINLQ9Y2I6 1382 aa11.92□□□□□ -0.5
COL11A1-201ENST00000353414 CCDC69A6NI79 296 aa11.92□□□□□ -0.5
COL11A1-201ENST00000353414 PODXL2Q9NZ53 605 aa11.92□□□□□ -0.5
COL11A1-201ENST00000353414 NESP48681 1621 aa11.92□□□□□ -0.5
COL11A1-201ENST00000353414 PDE3BQ13370 1112 aa11.92□□□□□ -0.5
COL11A1-201ENST00000353414 AXDND1Q5T1B0 1012 aaPredicted RBP11.92□□□□□ -0.5
COL11A1-201ENST00000353414 MPHOSPH8Q99549 860 aa11.92□□□□□ -0.5
COL11A1-201ENST00000353414 TRIM5Q9C035 493 aa11.92□□□□□ -0.5
COL11A1-201ENST00000353414 GSE1Q14687 1217 aa11.91□□□□□ -0.5
COL11A1-201ENST00000353414 DEF6Q9H4E7 631 aa11.91□□□□□ -0.5
COL11A1-201ENST00000353414 DHX8Q14562 1220 aaKnown RBP11.91□□□□□ -0.5
COL11A1-201ENST00000353414 SKOR2Q2VWA4 1001 aaPredicted RBP11.91□□□□□ -0.5
COL11A1-201ENST00000353414 CCDC158Q5M9N0 1113 aa11.91□□□□□ -0.5
COL11A1-201ENST00000353414 FIBPO43427 364 aa11.91□□□□□ -0.5
COL11A1-201ENST00000353414 API5Q9BZZ5 524 aaKnown RBP11.91□□□□□ -0.5
COL11A1-201ENST00000353414 WASHC2AQ641Q2 1341 aa11.9□□□□□ -0.5
COL11A1-201ENST00000353414 CAVIN1Q6NZI2 390 aaKnown RBP11.9□□□□□ -0.5
COL11A1-201ENST00000353414 NOM1Q5C9Z4 860 aaKnown RBP11.9□□□□□ -0.5
COL11A1-201ENST00000353414 RUNDC1Q96C34 613 aa11.9□□□□□ -0.5
COL11A1-201ENST00000353414 TXLNAP40222 546 aa11.9□□□□□ -0.5
COL11A1-201ENST00000353414 CDR1P51861 262 aa11.9□□□□□ -0.5
COL11A1-201ENST00000353414 USP47Q96K76 1375 aa11.9□□□□□ -0.5
COL11A1-201ENST00000353414 TAF3Q5VWG9 929 aa11.9□□□□□ -0.5
COL11A1-201ENST00000353414 HSP90B2PQ58FF3 399 aa11.9□□□□□ -0.51
COL11A1-201ENST00000353414 TSPYL1Q9H0U9 437 aa11.9□□□□□ -0.51
COL11A1-201ENST00000353414 HSP90AB4PQ58FF6 505 aa11.89□□□□□ -0.51
COL11A1-201ENST00000353414 C11orf95C9JLR9 678 aaPredicted RBP11.89□□□□□ -0.51
COL11A1-201ENST00000353414 C22orf23Q9BZE7 217 aa11.89□□□□□ -0.51
COL11A1-201ENST00000353414 RAI14Q9P0K7 980 aa11.89□□□□□ -0.51
COL11A1-201ENST00000353414 RDXP35241 583 aaKnown RBP11.89□□□□□ -0.51
COL11A1-201ENST00000353414 SMARCA4P51532 1647 aa11.89□□□□□ -0.51
COL11A1-201ENST00000353414 ROCK1Q13464 1354 aa11.89□□□□□ -0.51
COL11A1-201ENST00000353414 ZC3H6P61129 1189 aaKnown RBP11.89□□□□□ -0.51
COL11A1-201ENST00000353414 SERPINC1P01008 464 aa11.88□□□□□ -0.51
COL11A1-201ENST00000353414 NAT10Q9H0A0 1025 aaKnown RBP11.88□□□□□ -0.51
COL11A1-201ENST00000353414 GNL3LQ9NVN8 582 aaKnown RBP11.88□□□□□ -0.51
COL11A1-201ENST00000353414 MIS18AQ9NYP9 233 aa11.88□□□□□ -0.51
COL11A1-201ENST00000353414 TATP17735 454 aaPredicted RBP11.88□□□□□ -0.51
COL11A1-201ENST00000353414 NFKBIBQ15653 356 aa11.88□□□□□ -0.51
COL11A1-201ENST00000353414 ABCF2Q9UG63 623 aa11.88□□□□□ -0.51
COL11A1-201ENST00000353414 GPRASP1Q5JY77 1395 aa11.88□□□□□ -0.51
COL11A1-201ENST00000353414 RBM10P98175 930 aaKnown RBP11.88□□□□□ -0.51
COL11A1-201ENST00000353414 MTHFSP49914 203 aa11.88□□□□□ -0.51
COL11A1-201ENST00000353414 TDO2P48775 406 aa11.88□□□□□ -0.51
COL11A1-201ENST00000353414 CLASRPQ8N2M8 674 aaKnown RBP11.88□□□□□ -0.51
COL11A1-201ENST00000353414 TSR2Q969E8 191 aaKnown RBP11.88□□□□□ -0.51
COL11A1-201ENST00000353414 PRPF40AO75400 957 aaKnown RBP11.88□□□□□ -0.51
COL11A1-201ENST00000353414 TMX1Q9H3N1 280 aa11.88□□□□□ -0.51
COL11A1-201ENST00000353414 CCDC30Q5VVM6 783 aa11.87□□□□□ -0.51
COL11A1-201ENST00000353414 PSMA5P28066 241 aa11.87□□□□□ -0.51
COL11A1-201ENST00000353414 RAD54L2Q9Y4B4 1467 aa11.87□□□□□ -0.51
COL11A1-201ENST00000353414 TNNT1P13805 278 aa11.87□□□□□ -0.51
COL11A1-201ENST00000353414 SOGA3Q5TF21 947 aa11.87□□□□□ -0.51
COL11A1-201ENST00000353414 STK38Q15208 465 aa11.87□□□□□ -0.51
COL11A1-201ENST00000353414 FILIP1LQ4L180 1135 aa11.87□□□□□ -0.51
COL11A1-201ENST00000353414 CCDC191Q8NCU4 936 aa11.87□□□□□ -0.51
COL11A1-201ENST00000353414 KINO60870 393 aaKnown RBP11.87□□□□□ -0.51
COL11A1-201ENST00000353414 NEK4P51957 841 aa11.87□□□□□ -0.51
COL11A1-201ENST00000353414 GNAI1P63096 354 aa11.87□□□□□ -0.51
COL11A1-201ENST00000353414 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.87□□□□□ -0.51
COL11A1-201ENST00000353414 CCDC181Q5TID7 509 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms