RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 KLHL34Q8N239 644 aa16.21■□□□□ 0.19
IFT88-202ENST00000351808 SPTLC3Q9NUV7 552 aa16.2■□□□□ 0.18
IFT88-202ENST00000351808 FOXD4L5Q5VV16 416 aaPredicted RBP16.2■□□□□ 0.18
IFT88-202ENST00000351808 FOXD4L4Q8WXT5 416 aaPredicted RBP16.2■□□□□ 0.18
IFT88-202ENST00000351808 NUCB1Q02818 461 aa16.2■□□□□ 0.18
IFT88-202ENST00000351808 ZDHHC9Q9Y397 364 aa16.2■□□□□ 0.18
IFT88-202ENST00000351808 PRDM15P57071 1507 aaPredicted RBP16.19■□□□□ 0.18
IFT88-202ENST00000351808 BMP2KLQ5H9B9 411 aa16.19■□□□□ 0.18
IFT88-202ENST00000351808 ZGPATQ8N5A5 531 aaKnown RBP16.19■□□□□ 0.18
IFT88-202ENST00000351808 TIGD1Q96MW7 591 aa16.19■□□□□ 0.18
IFT88-202ENST00000351808 CCDC66A2RUB6 948 aa16.19■□□□□ 0.18
IFT88-202ENST00000351808 DIAPH3Q9NSV4 1193 aa16.19■□□□□ 0.18
IFT88-202ENST00000351808 USP25Q9UHP3 1055 aa16.19■□□□□ 0.18
IFT88-202ENST00000351808 IRX3P78415 501 aaPredicted RBP16.18■□□□□ 0.18
IFT88-202ENST00000351808 SLC20A2Q08357 652 aa16.18■□□□□ 0.18
IFT88-202ENST00000351808 CHD1LQ86WJ1 897 aa16.18■□□□□ 0.18
IFT88-202ENST00000351808 ASXL1Q8IXJ9 1541 aa16.18■□□□□ 0.18
IFT88-202ENST00000351808 CHAF1AQ13111 956 aaPredicted RBP16.17■□□□□ 0.18
IFT88-202ENST00000351808 CAPN2P17655 700 aa16.17■□□□□ 0.18
IFT88-202ENST00000351808 SHROOM2Q13796 1616 aa16.17■□□□□ 0.18
IFT88-202ENST00000351808 POLA1P09884 1462 aaPredicted RBP16.17■□□□□ 0.18
IFT88-202ENST00000351808 CTIFO43310 598 aaKnown RBP16.16■□□□□ 0.18
IFT88-202ENST00000351808 CTNNA3Q9UI47 895 aa16.16■□□□□ 0.18
IFT88-202ENST00000351808 ADGRL2O95490 1459 aa16.16■□□□□ 0.18
IFT88-202ENST00000351808 TRIM27P14373 513 aa16.16■□□□□ 0.18
IFT88-202ENST00000351808 TCP11L2Q8N4U5 519 aa16.16■□□□□ 0.18
IFT88-202ENST00000351808 DDX19BQ9UMR2 479 aa16.16■□□□□ 0.18
IFT88-202ENST00000351808 ADGBQ8N7X0 1667 aa16.16■□□□□ 0.18
IFT88-202ENST00000351808 CDCA8Q53HL2 280 aa16.16■□□□□ 0.18
IFT88-202ENST00000351808 AEBP1Q8IUX7 1158 aa16.16■□□□□ 0.18
IFT88-202ENST00000351808 EIF4G3O43432 1585 aaKnown RBP16.16■□□□□ 0.18
IFT88-202ENST00000351808 ADCY5O95622 1261 aa16.15■□□□□ 0.18
IFT88-202ENST00000351808 ERICH4A6NGS2 130 aa16.15■□□□□ 0.18
IFT88-202ENST00000351808 TRIM6-TRIM34B2RNG4 842 aa16.15■□□□□ 0.18
IFT88-202ENST00000351808 MBD3O95983 291 aa16.15■□□□□ 0.18
IFT88-202ENST00000351808 NCBP1Q09161 790 aaKnown RBP16.15■□□□□ 0.18
IFT88-202ENST00000351808 TERF2Q15554 542 aa16.15■□□□□ 0.18
IFT88-202ENST00000351808 TRIM34Q9BYJ4 488 aa16.15■□□□□ 0.18
IFT88-202ENST00000351808 GRIN2AQ12879 1464 aa16.14■□□□□ 0.17
IFT88-202ENST00000351808 RABEP1Q15276 862 aa16.14■□□□□ 0.17
IFT88-202ENST00000351808 TRERF1Q96PN7 1200 aa16.14■□□□□ 0.17
IFT88-202ENST00000351808 CWC22Q9HCG8 908 aaKnown RBP16.14■□□□□ 0.17
IFT88-202ENST00000351808 VGFO15240 615 aaPredicted RBP16.13■□□□□ 0.17
IFT88-202ENST00000351808 ANKRD45Q5TZF3 282 aa16.13■□□□□ 0.17
IFT88-202ENST00000351808 SMC4Q9NTJ3 1288 aa16.13■□□□□ 0.17
IFT88-202ENST00000351808 DDX41Q9UJV9 622 aaKnown RBP16.13■□□□□ 0.17
IFT88-202ENST00000351808 WDR63Q8IWG1 891 aa16.13■□□□□ 0.17
IFT88-202ENST00000351808 A2MP01023 1474 aa16.12■□□□□ 0.17
IFT88-202ENST00000351808 TEX2Q8IWB9 1127 aa16.12■□□□□ 0.17
IFT88-202ENST00000351808 RGS22Q8NE09 1264 aa16.12■□□□□ 0.17
IFT88-202ENST00000351808 PYCARDQ9ULZ3 195 aa16.12■□□□□ 0.17
IFT88-202ENST00000351808 TDRD9Q8NDG6 1382 aaKnown RBP16.12■□□□□ 0.17
IFT88-202ENST00000351808 WDR62O43379 1518 aa16.12■□□□□ 0.17
IFT88-202ENST00000351808 TMEM57Q8N5G2 664 aa16.12■□□□□ 0.17
IFT88-202ENST00000351808 KIAA1524Q8TCG1 905 aa16.12■□□□□ 0.17
IFT88-202ENST00000351808 SECISBP2LQ93073 1101 aaKnown RBP16.12■□□□□ 0.17
IFT88-202ENST00000351808 ZBTB9Q96C00 473 aa16.12■□□□□ 0.17
IFT88-202ENST00000351808 NPC1L1Q9UHC9 1359 aa16.12■□□□□ 0.17
IFT88-202ENST00000351808 TULP2O00295 520 aa16.11■□□□□ 0.17
IFT88-202ENST00000351808 RUNDC1Q96C34 613 aa16.11■□□□□ 0.17
IFT88-202ENST00000351808 ZBTB40Q9NUA8 1239 aa16.11■□□□□ 0.17
IFT88-202ENST00000351808 NAA30Q147X3 362 aaPredicted RBP16.11■□□□□ 0.17
IFT88-202ENST00000351808 ABCC10Q5T3U5 1492 aa16.1■□□□□ 0.17
IFT88-202ENST00000351808 PLCB2Q00722 1185 aa16.1■□□□□ 0.17
IFT88-202ENST00000351808 LAMC3Q9Y6N6 1575 aa16.1■□□□□ 0.17
IFT88-202ENST00000351808 PHF23Q9BUL5 403 aaPredicted RBP16.1■□□□□ 0.17
IFT88-202ENST00000351808 MORC2Q9Y6X9 1032 aaPredicted RBP16.1■□□□□ 0.17
IFT88-202ENST00000351808 CALCOCO1Q9P1Z2 691 aa16.09■□□□□ 0.17
IFT88-202ENST00000351808 UVSSAQ2YD98 709 aa16.09■□□□□ 0.17
IFT88-202ENST00000351808 ATF7IPQ6VMQ6 1270 aa16.09■□□□□ 0.17
IFT88-202ENST00000351808 TSR2Q969E8 191 aaKnown RBP16.09■□□□□ 0.17
IFT88-202ENST00000351808 LAMC1P11047 1609 aa16.08■□□□□ 0.17
IFT88-202ENST00000351808 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.08■□□□□ 0.16
IFT88-202ENST00000351808 SSH1Q8WYL5 1049 aa16.08■□□□□ 0.16
IFT88-202ENST00000351808 SYAP1Q96A49 352 aaPredicted RBP16.08■□□□□ 0.16
IFT88-202ENST00000351808 KCNF1Q9H3M0 494 aa16.08■□□□□ 0.16
IFT88-202ENST00000351808 NOB1Q9ULX3 412 aaKnown RBP16.08■□□□□ 0.16
IFT88-202ENST00000351808 CDC45O75419 566 aa16.08■□□□□ 0.16
IFT88-202ENST00000351808 ITSN2Q9NZM3 1697 aa16.07■□□□□ 0.16
IFT88-202ENST00000351808 CHRM1P11229 460 aaPredicted RBP16.07■□□□□ 0.16
IFT88-202ENST00000351808 FOXD4L6Q3SYB3 417 aaPredicted RBP16.07■□□□□ 0.16
IFT88-202ENST00000351808 FOXD4L3Q6VB84 417 aaPredicted RBP16.07■□□□□ 0.16
IFT88-202ENST00000351808 KIF18AQ8NI77 898 aa16.07■□□□□ 0.16
IFT88-202ENST00000351808 FAM184AQ8NB25 1140 aa16.07■□□□□ 0.16
IFT88-202ENST00000351808 TOPBP1Q92547 1522 aa16.07■□□□□ 0.16
IFT88-202ENST00000351808 HCLS1P14317 486 aaPredicted RBP16.06■□□□□ 0.16
IFT88-202ENST00000351808 GDPD2Q9HCC8 539 aa16.06■□□□□ 0.16
IFT88-202ENST00000351808 GADD45BO75293 160 aaPredicted RBP16.05■□□□□ 0.16
IFT88-202ENST00000351808 EXOSC9Q06265 439 aaKnown RBP16.05■□□□□ 0.16
IFT88-202ENST00000351808 KRT222Q8N1A0 295 aa16.05■□□□□ 0.16
IFT88-202ENST00000351808 TPRNQ4KMQ1 711 aa16.05■□□□□ 0.16
IFT88-202ENST00000351808 PRG4Q92954 1404 aaPredicted RBP16.05■□□□□ 0.16
IFT88-202ENST00000351808 PHF14O94880 888 aa16.05■□□□□ 0.16
IFT88-202ENST00000351808 SPC24Q8NBT2 197 aa16.05■□□□□ 0.16
IFT88-202ENST00000351808 PTPRGP23470 1445 aa16.04■□□□□ 0.16
IFT88-202ENST00000351808 USP26Q9BXU7 913 aa16.04■□□□□ 0.16
IFT88-202ENST00000351808 DNMBPQ6XZF7 1577 aa16.04■□□□□ 0.16
IFT88-202ENST00000351808 SYNMO15061 1565 aa16.04■□□□□ 0.16
IFT88-202ENST00000351808 ST18O60284 1047 aa16.04■□□□□ 0.16
IFT88-202ENST00000351808 CARD14Q9BXL6 1004 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms