RNA–Protein interactions for RNA: ENST00000350199.8

RNF38-202, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 5,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-202ENST00000350199 AIMP1Q12904 312 aaKnown RBP23.9■■□□□ 1.42
RNF38-202ENST00000350199 UBTFL1P0CB47 393 aaPredicted RBP23.9■■□□□ 1.42
RNF38-202ENST00000350199 L1TD1Q5T7N2 865 aaKnown RBP23.9■■□□□ 1.42
RNF38-202ENST00000350199 KDM6BO15054 1643 aa23.89■■□□□ 1.41
RNF38-202ENST00000350199 PTMSP20962 102 aa23.89■■□□□ 1.41
RNF38-202ENST00000350199 DUSP27Q5VZP5 1158 aa23.89■■□□□ 1.41
RNF38-202ENST00000350199 SYTL4Q96C24 671 aaPredicted RBP23.88■■□□□ 1.41
RNF38-202ENST00000350199 NKTRP30414 1462 aaKnown RBP23.88■■□□□ 1.41
RNF38-202ENST00000350199 REC8O95072 547 aa23.88■■□□□ 1.41
RNF38-202ENST00000350199 RIMS2Q9UQ26 1411 aa23.88■■□□□ 1.41
RNF38-202ENST00000350199 ANKRD36BQ8N2N9 1353 aa23.87■■□□□ 1.41
RNF38-202ENST00000350199 C20orf194Q5TEA3 1177 aa23.87■■□□□ 1.41
RNF38-202ENST00000350199 ZNF530Q6P9A1 599 aaPredicted RBP23.87■■□□□ 1.41
RNF38-202ENST00000350199 RIC3Q7Z5B4 369 aa23.87■■□□□ 1.41
RNF38-202ENST00000350199 GNAI3P08754 354 aa23.86■■□□□ 1.41
RNF38-202ENST00000350199 ZNF428Q96B54 188 aa23.86■■□□□ 1.41
RNF38-202ENST00000350199 IFIT2P09913 472 aaKnown RBP23.86■■□□□ 1.41
RNF38-202ENST00000350199 RARSP54136 660 aaKnown RBP23.86■■□□□ 1.41
RNF38-202ENST00000350199 HDGFL1Q5TGJ6 251 aa23.85■■□□□ 1.41
RNF38-202ENST00000350199 ABCC11Q96J66 1382 aa23.85■■□□□ 1.41
RNF38-202ENST00000350199 MYO5CQ9NQX4 1742 aa23.85■■□□□ 1.41
RNF38-202ENST00000350199 DIAPH3Q9NSV4 1193 aa23.85■■□□□ 1.41
RNF38-202ENST00000350199 RBM33Q96EV2 1170 aaKnown RBP23.85■■□□□ 1.41
RNF38-202ENST00000350199 SAMD9LQ8IVG5 1584 aa23.84■■□□□ 1.41
RNF38-202ENST00000350199 PER1O15534 1290 aaPredicted RBP23.84■■□□□ 1.41
RNF38-202ENST00000350199 TATP17735 454 aaPredicted RBP23.84■■□□□ 1.41
RNF38-202ENST00000350199 GTF2E1P29083 439 aaPredicted RBP23.84■■□□□ 1.41
RNF38-202ENST00000350199 G3BP1Q13283 466 aaKnown RBP eCLIP23.84■■□□□ 1.41
RNF38-202ENST00000350199 COL17A1Q9UMD9 1497 aaPredicted RBP23.84■■□□□ 1.41
RNF38-202ENST00000350199 FYB1O15117 783 aa23.83■■□□□ 1.41
RNF38-202ENST00000350199 CHD1O14646 1710 aa23.83■■□□□ 1.41
RNF38-202ENST00000350199 HSP90AB4PQ58FF6 505 aa23.83■■□□□ 1.41
RNF38-202ENST00000350199 C22orf23Q9BZE7 217 aa23.83■■□□□ 1.41
RNF38-202ENST00000350199 PHF8Q9UPP1 1060 aa23.83■■□□□ 1.4
RNF38-202ENST00000350199 DCTN1Q14203 1278 aa23.82■■□□□ 1.4
RNF38-202ENST00000350199 INTS3Q68E01 1043 aaKnown RBP23.82■■□□□ 1.4
RNF38-202ENST00000350199 MCM10Q7L590 875 aa23.82■■□□□ 1.4
RNF38-202ENST00000350199 GCC1Q96CN9 775 aa23.82■■□□□ 1.4
RNF38-202ENST00000350199 KCNH5Q8NCM2 988 aa23.81■■□□□ 1.4
RNF38-202ENST00000350199 USP35Q9P2H5 1018 aa23.81■■□□□ 1.4
RNF38-202ENST00000350199 ACEP12821 1306 aa23.81■■□□□ 1.4
RNF38-202ENST00000350199 SSH1Q8WYL5 1049 aa23.8■■□□□ 1.4
RNF38-202ENST00000350199 CARD14Q9BXL6 1004 aa23.8■■□□□ 1.4
RNF38-202ENST00000350199 HSP90B1P14625 803 aaKnown RBP23.8■■□□□ 1.4
RNF38-202ENST00000350199 FBLN1P23142 703 aa23.79■■□□□ 1.4
RNF38-202ENST00000350199 PUS7Q96PZ0 661 aaKnown RBP23.79■■□□□ 1.4
RNF38-202ENST00000350199 RTN4Q9NQC3 1192 aaKnown RBP23.79■■□□□ 1.4
RNF38-202ENST00000350199 IFT57Q9NWB7 429 aa23.79■■□□□ 1.4
RNF38-202ENST00000350199 TTC37Q6PGP7 1564 aa23.79■■□□□ 1.4
RNF38-202ENST00000350199 BACH2Q9BYV9 841 aa23.79■■□□□ 1.4
RNF38-202ENST00000350199 RUFY2Q8WXA3 655 aa23.79■■□□□ 1.4
RNF38-202ENST00000350199 TMEM57Q8N5G2 664 aa23.78■■□□□ 1.4
RNF38-202ENST00000350199 ZC3H6P61129 1189 aaKnown RBP23.78■■□□□ 1.4
RNF38-202ENST00000350199 CDC45O75419 566 aa23.78■■□□□ 1.4
RNF38-202ENST00000350199 ANO2Q9NQ90 1003 aa23.78■■□□□ 1.4
RNF38-202ENST00000350199 GNAI2P04899 355 aa23.78■■□□□ 1.4
RNF38-202ENST00000350199 GNAT3A8MTJ3 354 aa23.77■■□□□ 1.4
RNF38-202ENST00000350199 CCT4P50991 539 aaKnown RBP23.77■■□□□ 1.4
RNF38-202ENST00000350199 STRN4Q9NRL3 753 aa23.77■■□□□ 1.4
RNF38-202ENST00000350199 MIS18AQ9NYP9 233 aa23.77■■□□□ 1.4
RNF38-202ENST00000350199 ZMYM3Q14202 1370 aa23.76■■□□□ 1.39
RNF38-202ENST00000350199 FOXO3O43524 673 aa23.76■■□□□ 1.39
RNF38-202ENST00000350199 GNL2Q13823 731 aaKnown RBP23.76■■□□□ 1.39
RNF38-202ENST00000350199 SURF6O75683 361 aaKnown RBP23.75■■□□□ 1.39
RNF38-202ENST00000350199 NEO1Q92859 1461 aa23.75■■□□□ 1.39
RNF38-202ENST00000350199 ATP10AO60312 1499 aa23.75■■□□□ 1.39
RNF38-202ENST00000350199 LRPPRCP42704 1394 aaKnown RBP23.74■■□□□ 1.39
RNF38-202ENST00000350199 FOXD4L5Q5VV16 416 aaPredicted RBP23.74■■□□□ 1.39
RNF38-202ENST00000350199 FOXD4L4Q8WXT5 416 aaPredicted RBP23.74■■□□□ 1.39
RNF38-202ENST00000350199 SPG7Q9UQ90 795 aa23.73■■□□□ 1.39
RNF38-202ENST00000350199 PPIP5K1Q6PFW1 1433 aa23.73■■□□□ 1.39
RNF38-202ENST00000350199 ALDH1L2Q3SY69 923 aa23.73■■□□□ 1.39
RNF38-202ENST00000350199 TOM1L2Q6ZVM7 507 aa23.73■■□□□ 1.39
RNF38-202ENST00000350199 ERC2O15083 957 aa23.73■■□□□ 1.39
RNF38-202ENST00000350199 PRDM11Q9NQV5 511 aa23.73■■□□□ 1.39
RNF38-202ENST00000350199 POLR3AO14802 1390 aaPredicted RBP23.72■■□□□ 1.39
RNF38-202ENST00000350199 PREX2Q70Z35 1606 aa23.72■■□□□ 1.39
RNF38-202ENST00000350199 DNTTIP2Q5QJE6 756 aaKnown RBP23.71■■□□□ 1.39
RNF38-202ENST00000350199 USHBP1Q8N6Y0 703 aa23.71■■□□□ 1.39
RNF38-202ENST00000350199 DDX11L8A8MPP1 907 aa23.71■■□□□ 1.39
RNF38-202ENST00000350199 SPATA31E1Q6ZUB1 1445 aa23.71■■□□□ 1.39
RNF38-202ENST00000350199 YTHDC2Q9H6S0 1430 aaKnown RBP23.71■■□□□ 1.39
RNF38-202ENST00000350199 BTBD11A6QL63 1104 aa23.7■■□□□ 1.39
RNF38-202ENST00000350199 FRAT2O75474 233 aaPredicted RBP23.7■■□□□ 1.38
RNF38-202ENST00000350199 SRCIN1Q9C0H9 1055 aa23.7■■□□□ 1.38
RNF38-202ENST00000350199 ERCC6L2Q5T890 1561 aa23.7■■□□□ 1.38
RNF38-202ENST00000350199 PIK3C2GO75747 1445 aa23.7■■□□□ 1.38
RNF38-202ENST00000350199 SYAP1Q96A49 352 aaPredicted RBP23.7■■□□□ 1.38
RNF38-202ENST00000350199 TTC21BQ7Z4L5 1316 aa23.7■■□□□ 1.38
RNF38-202ENST00000350199 GOLGA6L3A6NEY3 463 aa23.69■■□□□ 1.38
RNF38-202ENST00000350199 ZKSCAN1P17029 563 aaPredicted RBP23.69■■□□□ 1.38
RNF38-202ENST00000350199 ZCCHC11Q5TAX3 1644 aaKnown RBP23.69■■□□□ 1.38
RNF38-202ENST00000350199 ABCC1P33527 1531 aa23.69■■□□□ 1.38
RNF38-202ENST00000350199 CABP4P57796 275 aa23.69■■□□□ 1.38
RNF38-202ENST00000350199 CLASRPQ8N2M8 674 aaKnown RBP23.68■■□□□ 1.38
RNF38-202ENST00000350199 HTATSF1O43719 755 aaKnown RBP23.68■■□□□ 1.38
RNF38-202ENST00000350199 CHD1LQ86WJ1 897 aa23.68■■□□□ 1.38
RNF38-202ENST00000350199 NPATQ14207 1427 aa23.68■■□□□ 1.38
RNF38-202ENST00000350199 A0A1W2PP64 1363 aa23.68■■□□□ 1.38
RNF38-202ENST00000350199 CHMP5Q9NZZ3 219 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms