RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 ANKRD30AQ9BXX3 1397 aa13.17□□□□□ -0.3
CAPN3-203ENST00000349748 PTMSP20962 102 aa13.17□□□□□ -0.3
CAPN3-203ENST00000349748 ADGBQ8N7X0 1667 aa13.16□□□□□ -0.3
CAPN3-203ENST00000349748 GOLGA6L22H0YM25 854 aa13.16□□□□□ -0.3
CAPN3-203ENST00000349748 RNF214Q8ND24 703 aa13.16□□□□□ -0.3
CAPN3-203ENST00000349748 SLC52A1Q9NWF4 448 aa13.16□□□□□ -0.3
CAPN3-203ENST00000349748 DIP2BQ9P265 1576 aa13.16□□□□□ -0.3
CAPN3-203ENST00000349748 PREX2Q70Z35 1606 aa13.16□□□□□ -0.3
CAPN3-203ENST00000349748 HMGN5P82970 282 aaKnown RBP13.16□□□□□ -0.3
CAPN3-203ENST00000349748 RBM27Q9P2N5 1060 aaKnown RBP13.16□□□□□ -0.3
CAPN3-203ENST00000349748 CIZ1Q9ULV3 898 aaPredicted RBP13.16□□□□□ -0.3
CAPN3-203ENST00000349748 BAG4O95429 457 aaKnown RBP13.15□□□□□ -0.3
CAPN3-203ENST00000349748 TIGD1Q96MW7 591 aa13.15□□□□□ -0.3
CAPN3-203ENST00000349748 PCDHB15Q9Y5E8 787 aa13.15□□□□□ -0.3
CAPN3-203ENST00000349748 ADGRL1O94910 1474 aa13.15□□□□□ -0.3
CAPN3-203ENST00000349748 MYO5CQ9NQX4 1742 aa13.15□□□□□ -0.3
CAPN3-203ENST00000349748 RBM25P49756 843 aaKnown RBP13.14□□□□□ -0.31
CAPN3-203ENST00000349748 CARD11Q9BXL7 1154 aa13.14□□□□□ -0.31
CAPN3-203ENST00000349748 CCDC141Q6ZP82 1450 aa13.14□□□□□ -0.31
CAPN3-203ENST00000349748 CD2BP2O95400 341 aaKnown RBP13.14□□□□□ -0.31
CAPN3-203ENST00000349748 SLFN14P0C7P3 912 aa13.14□□□□□ -0.31
CAPN3-203ENST00000349748 MCTP1Q6DN14 999 aa13.14□□□□□ -0.31
CAPN3-203ENST00000349748 KCNG1Q9UIX4 513 aa13.14□□□□□ -0.31
CAPN3-203ENST00000349748 ADGRL2O95490 1459 aa13.14□□□□□ -0.31
CAPN3-203ENST00000349748 CGNL1Q0VF96 1302 aa13.13□□□□□ -0.31
CAPN3-203ENST00000349748 CROCC2H7BZ55 1655 aa13.13□□□□□ -0.31
CAPN3-203ENST00000349748 RALGAPBQ86X10 1494 aa13.13□□□□□ -0.31
CAPN3-203ENST00000349748 ERICH4A6NGS2 130 aa13.13□□□□□ -0.31
CAPN3-203ENST00000349748 SLFN5Q08AF3 891 aa13.13□□□□□ -0.31
CAPN3-203ENST00000349748 KDM2AQ9Y2K7 1162 aa13.13□□□□□ -0.31
CAPN3-203ENST00000349748 PLEKHH2Q8IVE3 1493 aa13.13□□□□□ -0.31
CAPN3-203ENST00000349748 SOX12O15370 315 aa13.12□□□□□ -0.31
CAPN3-203ENST00000349748 UHRF1BP1Q6BDS2 1440 aa13.12□□□□□ -0.31
CAPN3-203ENST00000349748 MYCNP04198 464 aaPredicted RBP13.12□□□□□ -0.31
CAPN3-203ENST00000349748 MLECQ14165 292 aa13.12□□□□□ -0.31
CAPN3-203ENST00000349748 NOLC1Q14978 699 aaKnown RBP eCLIP13.12□□□□□ -0.31
CAPN3-203ENST00000349748 ANKRD50Q9ULJ7 1429 aa13.12□□□□□ -0.31
CAPN3-203ENST00000349748 ABCA9Q8IUA7 1624 aa13.12□□□□□ -0.31
CAPN3-203ENST00000349748 ZNF521Q96K83 1311 aa13.11□□□□□ -0.31
CAPN3-203ENST00000349748 HDAC5Q9UQL6 1122 aa13.11□□□□□ -0.31
CAPN3-203ENST00000349748 KIF13AQ9H1H9 1805 aa13.11□□□□□ -0.31
CAPN3-203ENST00000349748 CCDC66A2RUB6 948 aa13.11□□□□□ -0.31
CAPN3-203ENST00000349748 OGFRQ9NZT2 677 aa13.11□□□□□ -0.31
CAPN3-203ENST00000349748 NUP155O75694 1391 aa13.1□□□□□ -0.31
CAPN3-203ENST00000349748 SYCE3A1L190 88 aa13.1□□□□□ -0.31
CAPN3-203ENST00000349748 PER1O15534 1290 aaPredicted RBP13.1□□□□□ -0.31
CAPN3-203ENST00000349748 SNX21Q969T3 373 aa13.1□□□□□ -0.31
CAPN3-203ENST00000349748 TULP2O00295 520 aa13.09□□□□□ -0.31
CAPN3-203ENST00000349748 GABPB1Q06547 395 aaPredicted RBP13.09□□□□□ -0.31
CAPN3-203ENST00000349748 ANKRD7Q92527 254 aa13.09□□□□□ -0.31
CAPN3-203ENST00000349748 TNNQ9UQP3 1299 aa13.09□□□□□ -0.31
CAPN3-203ENST00000349748 CCDC146Q8IYE0 955 aa13.09□□□□□ -0.31
CAPN3-203ENST00000349748 GAS2L2Q8NHY3 880 aa13.09□□□□□ -0.31
CAPN3-203ENST00000349748 PIBF1Q8WXW3 757 aa13.09□□□□□ -0.31
CAPN3-203ENST00000349748 RIOK3O14730 519 aaKnown RBP13.08□□□□□ -0.31
CAPN3-203ENST00000349748 PMFBP1Q8TBY8 1022 aa13.08□□□□□ -0.31
CAPN3-203ENST00000349748 FEZ1Q99689 392 aa13.08□□□□□ -0.31
CAPN3-203ENST00000349748 TTC12Q9H892 705 aaPredicted RBP13.08□□□□□ -0.31
CAPN3-203ENST00000349748 LMBRD1Q9NUN5 540 aa13.08□□□□□ -0.32
CAPN3-203ENST00000349748 PDE3AQ14432 1141 aa13.08□□□□□ -0.32
CAPN3-203ENST00000349748 SAMD1Q6SPF0 538 aaPredicted RBP13.08□□□□□ -0.32
CAPN3-203ENST00000349748 RBM42Q9BTD8 480 aaKnown RBP13.08□□□□□ -0.32
CAPN3-203ENST00000349748 E9PCH4 1651 aa13.08□□□□□ -0.32
CAPN3-203ENST00000349748 ABCC1P33527 1531 aa13.07□□□□□ -0.32
CAPN3-203ENST00000349748 KIF3BO15066 747 aa13.07□□□□□ -0.32
CAPN3-203ENST00000349748 PRR29P0C7W0 189 aa13.07□□□□□ -0.32
CAPN3-203ENST00000349748 GPT2Q8TD30 523 aa13.07□□□□□ -0.32
CAPN3-203ENST00000349748 TERF2Q15554 542 aa13.07□□□□□ -0.32
CAPN3-203ENST00000349748 NCBP3Q53F19 620 aaKnown RBP13.07□□□□□ -0.32
CAPN3-203ENST00000349748 CNPY4Q8N129 248 aa13.07□□□□□ -0.32
CAPN3-203ENST00000349748 CHAMP1Q96JM3 812 aa13.07□□□□□ -0.32
CAPN3-203ENST00000349748 DMRT2Q9Y5R5 561 aa13.07□□□□□ -0.32
CAPN3-203ENST00000349748 PSEN1P49768 467 aa13.06□□□□□ -0.32
CAPN3-203ENST00000349748 WDR43Q15061 677 aaKnown RBP eCLIP13.06□□□□□ -0.32
CAPN3-203ENST00000349748 SENP3Q9H4L4 574 aaPredicted RBP13.06□□□□□ -0.32
CAPN3-203ENST00000349748 PRPF40AO75400 957 aaKnown RBP13.06□□□□□ -0.32
CAPN3-203ENST00000349748 APPP05067 770 aa13.05□□□□□ -0.32
CAPN3-203ENST00000349748 RLBP1P12271 317 aa13.05□□□□□ -0.32
CAPN3-203ENST00000349748 TMEM63CQ9P1W3 806 aa13.05□□□□□ -0.32
CAPN3-203ENST00000349748 INSRP06213 1382 aa13.05□□□□□ -0.32
CAPN3-203ENST00000349748 LOC102724159A0A0B4J2E5 919 aa13.05□□□□□ -0.32
CAPN3-203ENST00000349748 FKBP5Q13451 457 aaPredicted RBP13.05□□□□□ -0.32
CAPN3-203ENST00000349748 PWP2Q15269 919 aaKnown RBP13.05□□□□□ -0.32
CAPN3-203ENST00000349748 LRSAM1Q6UWE0 723 aa13.05□□□□□ -0.32
CAPN3-203ENST00000349748 TRMT2AQ8IZ69 625 aaKnown RBP13.05□□□□□ -0.32
CAPN3-203ENST00000349748 MMP14P50281 582 aa13.05□□□□□ -0.32
CAPN3-203ENST00000349748 PKP1Q13835 747 aa13.05□□□□□ -0.32
CAPN3-203ENST00000349748 GGT6Q6P531 493 aa13.05□□□□□ -0.32
CAPN3-203ENST00000349748 NSFL1CQ9UNZ2 370 aaKnown RBP13.05□□□□□ -0.32
CAPN3-203ENST00000349748 GLI2P10070 1586 aa13.04□□□□□ -0.32
CAPN3-203ENST00000349748 NKTRP30414 1462 aaKnown RBP13.04□□□□□ -0.32
CAPN3-203ENST00000349748 MAP3K4Q9Y6R4 1608 aa13.04□□□□□ -0.32
CAPN3-203ENST00000349748 CLEC17AQ6ZS10 378 aa13.04□□□□□ -0.32
CAPN3-203ENST00000349748 FEZ2Q9UHY8 353 aaPredicted RBP13.04□□□□□ -0.32
CAPN3-203ENST00000349748 CTNNA3Q9UI47 895 aa13.04□□□□□ -0.32
CAPN3-203ENST00000349748 ARHGEF5Q12774 1597 aa13.04□□□□□ -0.32
CAPN3-203ENST00000349748 K7ELQ4 463 aaPredicted RBP13.04□□□□□ -0.32
CAPN3-203ENST00000349748 KIF2CQ99661 725 aa13.04□□□□□ -0.32
CAPN3-203ENST00000349748 ZMYM3Q14202 1370 aa13.03□□□□□ -0.32
CAPN3-203ENST00000349748 TMX1Q9H3N1 280 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms