RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 NGDNQ8NEJ9 315 aaKnown RBP14.74□□□□□ -0.05
ECM1-201ENST00000346569 SCAF1Q9H7N4 1312 aaKnown RBP14.73□□□□□ -0.05
ECM1-201ENST00000346569 ZRANB1Q9UGI0 708 aa14.73□□□□□ -0.05
ECM1-201ENST00000346569 ADAMTS8Q9UP79 889 aa14.73□□□□□ -0.05
ECM1-201ENST00000346569 STRCP1A6NGW2 1772 aa14.72□□□□□ -0.05
ECM1-201ENST00000346569 MON2Q7Z3U7 1717 aa14.72□□□□□ -0.05
ECM1-201ENST00000346569 PHF8Q9UPP1 1060 aa14.72□□□□□ -0.05
ECM1-201ENST00000346569 TMEM94Q12767 1356 aa14.72□□□□□ -0.05
ECM1-201ENST00000346569 RGPD8O14715 1765 aaPredicted RBP14.71□□□□□ -0.05
ECM1-201ENST00000346569 C14orf37Q86TY3 774 aa14.71□□□□□ -0.05
ECM1-201ENST00000346569 TTC21AQ8NDW8 1320 aa14.71□□□□□ -0.06
ECM1-201ENST00000346569 ZBED9Q6R2W3 1325 aa14.7□□□□□ -0.06
ECM1-201ENST00000346569 ITSN1Q15811 1721 aa14.69□□□□□ -0.06
ECM1-201ENST00000346569 COG3Q96JB2 828 aa14.69□□□□□ -0.06
ECM1-201ENST00000346569 POLKQ9UBT6 870 aa14.69□□□□□ -0.06
ECM1-201ENST00000346569 ANKRD26Q9UPS8 1709 aa14.69□□□□□ -0.06
ECM1-201ENST00000346569 AATKQ6ZMQ8 1374 aa14.69□□□□□ -0.06
ECM1-201ENST00000346569 PNPLA6Q8IY17 1366 aa14.69□□□□□ -0.06
ECM1-201ENST00000346569 FBLN1P23142 703 aa14.68□□□□□ -0.06
ECM1-201ENST00000346569 ESCO1Q5FWF5 840 aa14.68□□□□□ -0.06
ECM1-201ENST00000346569 ORAI2Q96SN7 254 aa14.68□□□□□ -0.06
ECM1-201ENST00000346569 USP31Q70CQ4 1352 aa14.68□□□□□ -0.06
ECM1-201ENST00000346569 DCCP43146 1447 aa14.67□□□□□ -0.06
ECM1-201ENST00000346569 WDR43Q15061 677 aaKnown RBP eCLIP14.67□□□□□ -0.06
ECM1-201ENST00000346569 CFAP53Q96M91 514 aa14.67□□□□□ -0.06
ECM1-201ENST00000346569 KIF20BQ96Q89 1820 aa14.67□□□□□ -0.06
ECM1-201ENST00000346569 NRKQ7Z2Y5 1582 aa14.67□□□□□ -0.06
ECM1-201ENST00000346569 C1orf167Q5SNV9 1468 aa14.66□□□□□ -0.06
ECM1-201ENST00000346569 LRRC7Q96NW7 1537 aa14.66□□□□□ -0.06
ECM1-201ENST00000346569 OVOS2A0A0J9YW53 1432 aa14.66□□□□□ -0.06
ECM1-201ENST00000346569 BLMP54132 1417 aaPredicted RBP14.66□□□□□ -0.06
ECM1-201ENST00000346569 OVOS2Q6IE36 1432 aa14.66□□□□□ -0.06
ECM1-201ENST00000346569 UBAP1LF5GYI3 381 aa14.66□□□□□ -0.06
ECM1-201ENST00000346569 ATF3P18847 181 aa14.66□□□□□ -0.06
ECM1-201ENST00000346569 CADPS2Q86UW7 1296 aa14.66□□□□□ -0.06
ECM1-201ENST00000346569 MST1RQ04912 1400 aa14.63□□□□□ -0.07
ECM1-201ENST00000346569 PSME1Q06323 249 aa14.63□□□□□ -0.07
ECM1-201ENST00000346569 EMILIN1Q9Y6C2 1016 aa14.63□□□□□ -0.07
ECM1-201ENST00000346569 COL3A1P02461 1466 aaPredicted RBP14.63□□□□□ -0.07
ECM1-201ENST00000346569 FOXO3O43524 673 aa14.62□□□□□ -0.07
ECM1-201ENST00000346569 MSH6P52701 1360 aa14.62□□□□□ -0.07
ECM1-201ENST00000346569 SMG6Q86US8 1419 aaKnown RBP14.62□□□□□ -0.07
ECM1-201ENST00000346569 XIRP1Q702N8 1843 aaKnown RBP14.61□□□□□ -0.07
ECM1-201ENST00000346569 NLRP6P59044 892 aa14.61□□□□□ -0.07
ECM1-201ENST00000346569 DIAPH1O60610 1272 aaKnown RBP14.6□□□□□ -0.07
ECM1-201ENST00000346569 RRS1Q15050 365 aaKnown RBP14.6□□□□□ -0.07
ECM1-201ENST00000346569 ABTB2Q8N961 1025 aa14.6□□□□□ -0.07
ECM1-201ENST00000346569 NUDCQ9Y266 331 aa14.6□□□□□ -0.07
ECM1-201ENST00000346569 MAP2P11137 1827 aaKnown RBP14.6□□□□□ -0.07
ECM1-201ENST00000346569 SHPRHQ149N8 1683 aa14.6□□□□□ -0.07
ECM1-201ENST00000346569 KRT28Q7Z3Y7 464 aa14.59□□□□□ -0.07
ECM1-201ENST00000346569 SENP3-EIF4A1A0A087X0R7 540 aa14.58□□□□□ -0.07
ECM1-201ENST00000346569 TOM1O60784 492 aa14.58□□□□□ -0.07
ECM1-201ENST00000346569 PAK3O75914 559 aaPredicted RBP14.58□□□□□ -0.07
ECM1-201ENST00000346569 IL13P35225 146 aa14.58□□□□□ -0.08
ECM1-201ENST00000346569 NGEFQ8N5V2 710 aa14.58□□□□□ -0.08
ECM1-201ENST00000346569 RUNDC1Q96C34 613 aa14.58□□□□□ -0.08
ECM1-201ENST00000346569 PIK3C2AO00443 1686 aa14.57□□□□□ -0.08
ECM1-201ENST00000346569 APAF1O14727 1248 aa14.57□□□□□ -0.08
ECM1-201ENST00000346569 PPM1GO15355 546 aaPredicted RBP14.57□□□□□ -0.08
ECM1-201ENST00000346569 U2AF1L5P0DN76 240 aaPredicted RBP14.57□□□□□ -0.08
ECM1-201ENST00000346569 U2AF1Q01081 240 aaKnown RBP eCLIP14.57□□□□□ -0.08
ECM1-201ENST00000346569 PDE3BQ13370 1112 aa14.57□□□□□ -0.08
ECM1-201ENST00000346569 NCBP3Q53F19 620 aaKnown RBP14.57□□□□□ -0.08
ECM1-201ENST00000346569 CCDC146Q8IYE0 955 aa14.57□□□□□ -0.08
ECM1-201ENST00000346569 PLEKHF1Q96S99 279 aa14.57□□□□□ -0.08
ECM1-201ENST00000346569 SLAIN2Q9P270 581 aa14.57□□□□□ -0.08
ECM1-201ENST00000346569 ZNF521Q96K83 1311 aa14.56□□□□□ -0.08
ECM1-201ENST00000346569 NUTM2GQ5VZR2 741 aa14.56□□□□□ -0.08
ECM1-201ENST00000346569 SALL2Q9Y467 1007 aaPredicted RBP14.56□□□□□ -0.08
ECM1-201ENST00000346569 CDK12Q9NYV4 1490 aaPredicted RBP14.56□□□□□ -0.08
ECM1-201ENST00000346569 USP54Q70EL1 1684 aa14.55□□□□□ -0.08
ECM1-201ENST00000346569 MAP3K19Q56UN5 1328 aa14.55□□□□□ -0.08
ECM1-201ENST00000346569 KIF1AQ12756 1690 aa14.54□□□□□ -0.08
ECM1-201ENST00000346569 U2SURPO15042 1029 aaKnown RBP14.54□□□□□ -0.08
ECM1-201ENST00000346569 FCHSD2O94868 740 aa14.54□□□□□ -0.08
ECM1-201ENST00000346569 XPCQ01831 940 aaPredicted RBP14.54□□□□□ -0.08
ECM1-201ENST00000346569 BRINP3Q76B58 766 aa14.54□□□□□ -0.08
ECM1-201ENST00000346569 HSPA1LP34931 641 aa14.53□□□□□ -0.08
ECM1-201ENST00000346569 TCP11L2Q8N4U5 519 aa14.53□□□□□ -0.08
ECM1-201ENST00000346569 DDX17Q92841 729 aaKnown RBP14.53□□□□□ -0.08
ECM1-201ENST00000346569 NPHP3Q7Z494 1330 aa14.52□□□□□ -0.08
ECM1-201ENST00000346569 MARF1Q9Y4F3 1742 aaKnown RBP14.52□□□□□ -0.08
ECM1-201ENST00000346569 PIP4K2BP78356 416 aa14.52□□□□□ -0.08
ECM1-201ENST00000346569 EIF4A2Q14240 407 aaKnown RBP14.52□□□□□ -0.08
ECM1-201ENST00000346569 HSP90AB2PQ58FF8 381 aa14.52□□□□□ -0.08
ECM1-201ENST00000346569 KCNH5Q8NCM2 988 aa14.52□□□□□ -0.08
ECM1-201ENST00000346569 SBNO1A3KN83 1393 aa14.52□□□□□ -0.09
ECM1-201ENST00000346569 KIF24Q5T7B8 1368 aa14.52□□□□□ -0.09
ECM1-201ENST00000346569 RSPH6AQ9H0K4 717 aa14.51□□□□□ -0.09
ECM1-201ENST00000346569 PNNQ9H307 717 aaKnown RBP14.51□□□□□ -0.09
ECM1-201ENST00000346569 TRPM3Q9HCF6 1732 aaPredicted RBP14.51□□□□□ -0.09
ECM1-201ENST00000346569 USP19O94966 1318 aa14.51□□□□□ -0.09
ECM1-201ENST00000346569 SOX12O15370 315 aa14.5□□□□□ -0.09
ECM1-201ENST00000346569 GCP02774 474 aa14.5□□□□□ -0.09
ECM1-201ENST00000346569 CCDC27Q2M243 656 aa14.5□□□□□ -0.09
ECM1-201ENST00000346569 CDCA7LQ96GN5 454 aa14.5□□□□□ -0.09
ECM1-201ENST00000346569 GTF3C3Q9Y5Q9 886 aa14.5□□□□□ -0.09
ECM1-201ENST00000346569 AMPHP49418 695 aa14.49□□□□□ -0.09
ECM1-201ENST00000346569 TRMT2AQ8IZ69 625 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms