RNA–Protein interactions for RNA: ENST00000344129.2

CT55-202, Transcript of cancer/testis antigen 55, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CT55, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-202ENST00000344129 NRKQ7Z2Y5 1582 aa17.12■□□□□ 0.33
CT55-202ENST00000344129 ANKRD26Q9UPS8 1709 aa17.12■□□□□ 0.33
CT55-202ENST00000344129 NCOA3Q9Y6Q9 1424 aa17.12■□□□□ 0.33
CT55-202ENST00000344129 TTC21BQ7Z4L5 1316 aa17.11■□□□□ 0.33
CT55-202ENST00000344129 ATF3P18847 181 aa17.11■□□□□ 0.33
CT55-202ENST00000344129 PNISRQ8TF01 805 aaKnown RBP17.11■□□□□ 0.33
CT55-202ENST00000344129 ORAI2Q96SN7 254 aa17.11■□□□□ 0.33
CT55-202ENST00000344129 MSH6P52701 1360 aa17.09■□□□□ 0.33
CT55-202ENST00000344129 C1orf167Q5SNV9 1468 aa17.09■□□□□ 0.33
CT55-202ENST00000344129 MST1RQ04912 1400 aa17.08■□□□□ 0.32
CT55-202ENST00000344129 SSH2Q76I76 1423 aa17.08■□□□□ 0.32
CT55-202ENST00000344129 DCCP43146 1447 aa17.07■□□□□ 0.32
CT55-202ENST00000344129 FBLN1P23142 703 aa17.07■□□□□ 0.32
CT55-202ENST00000344129 CADPS2Q86UW7 1296 aa17.06■□□□□ 0.32
CT55-202ENST00000344129 COG3Q96JB2 828 aa17.06■□□□□ 0.32
CT55-202ENST00000344129 MTHFSP49914 203 aa17.05■□□□□ 0.32
CT55-202ENST00000344129 PAK3O75914 559 aaPredicted RBP17.04■□□□□ 0.32
CT55-202ENST00000344129 HNRNPUQ00839 825 aaKnown RBP eCLIP17.04■□□□□ 0.32
CT55-202ENST00000344129 PSME1Q06323 249 aa17.04■□□□□ 0.32
CT55-202ENST00000344129 TTC21AQ8NDW8 1320 aa17.04■□□□□ 0.32
CT55-202ENST00000344129 FOXO3O43524 673 aa17.04■□□□□ 0.32
CT55-202ENST00000344129 XPCQ01831 940 aaPredicted RBP17.04■□□□□ 0.32
CT55-202ENST00000344129 SENP3-EIF4A1A0A087X0R7 540 aa17.03■□□□□ 0.32
CT55-202ENST00000344129 NUTM2GQ5VZR2 741 aa17.02■□□□□ 0.32
CT55-202ENST00000344129 PIK3C2AO00443 1686 aa17.02■□□□□ 0.32
CT55-202ENST00000344129 CENPBP07199 599 aaPredicted RBP17.01■□□□□ 0.31
CT55-202ENST00000344129 OVOS2A0A0J9YW53 1432 aa17.01■□□□□ 0.31
CT55-202ENST00000344129 OVOS2Q6IE36 1432 aa17.01■□□□□ 0.31
CT55-202ENST00000344129 KIF1AQ12756 1690 aa17.01■□□□□ 0.31
CT55-202ENST00000344129 SOX12O15370 315 aa17■□□□□ 0.31
CT55-202ENST00000344129 WDR43Q15061 677 aaKnown RBP eCLIP17■□□□□ 0.31
CT55-202ENST00000344129 DDX17Q92841 729 aaKnown RBP17■□□□□ 0.31
CT55-202ENST00000344129 PPM1GO15355 546 aaPredicted RBP16.99■□□□□ 0.31
CT55-202ENST00000344129 NLRP6P59044 892 aa16.99■□□□□ 0.31
CT55-202ENST00000344129 ABTB2Q8N961 1025 aa16.99■□□□□ 0.31
CT55-202ENST00000344129 CFAP53Q96M91 514 aa16.99■□□□□ 0.31
CT55-202ENST00000344129 ADAMTS8Q9UP79 889 aa16.99■□□□□ 0.31
CT55-202ENST00000344129 SCAF1Q9H7N4 1312 aaKnown RBP16.99■□□□□ 0.31
CT55-202ENST00000344129 RRS1Q15050 365 aaKnown RBP16.99■□□□□ 0.31
CT55-202ENST00000344129 POLKQ9UBT6 870 aa16.99■□□□□ 0.31
CT55-202ENST00000344129 EMILIN1Q9Y6C2 1016 aa16.99■□□□□ 0.31
CT55-202ENST00000344129 KRT28Q7Z3Y7 464 aa16.98■□□□□ 0.31
CT55-202ENST00000344129 LTBP4Q8N2S1 1624 aa16.97■□□□□ 0.31
CT55-202ENST00000344129 MAP2P11137 1827 aaKnown RBP16.97■□□□□ 0.31
CT55-202ENST00000344129 SLAIN2Q9P270 581 aa16.97■□□□□ 0.31
CT55-202ENST00000344129 USP31Q70CQ4 1352 aa16.97■□□□□ 0.31
CT55-202ENST00000344129 SHPRHQ149N8 1683 aa16.96■□□□□ 0.31
CT55-202ENST00000344129 AATKQ6ZMQ8 1374 aa16.96■□□□□ 0.3
CT55-202ENST00000344129 BRINP3Q76B58 766 aa16.96■□□□□ 0.3
CT55-202ENST00000344129 MARF1Q9Y4F3 1742 aaKnown RBP16.95■□□□□ 0.3
CT55-202ENST00000344129 PLEKHG5O94827 1062 aa16.95■□□□□ 0.3
CT55-202ENST00000344129 LMOD2Q6P5Q4 547 aa16.95■□□□□ 0.3
CT55-202ENST00000344129 TRPM3Q9HCF6 1732 aaPredicted RBP16.95■□□□□ 0.3
CT55-202ENST00000344129 COL3A1P02461 1466 aaPredicted RBP16.94■□□□□ 0.3
CT55-202ENST00000344129 BLMP54132 1417 aaPredicted RBP16.93■□□□□ 0.3
CT55-202ENST00000344129 CCDC146Q8IYE0 955 aa16.93■□□□□ 0.3
CT55-202ENST00000344129 SMG6Q86US8 1419 aaKnown RBP16.92■□□□□ 0.3
CT55-202ENST00000344129 USP54Q70EL1 1684 aa16.92■□□□□ 0.3
CT55-202ENST00000344129 PNPLA6Q8IY17 1366 aa16.92■□□□□ 0.3
CT55-202ENST00000344129 NPHP3Q7Z494 1330 aa16.91■□□□□ 0.3
CT55-202ENST00000344129 SALL2Q9Y467 1007 aaPredicted RBP16.91■□□□□ 0.3
CT55-202ENST00000344129 U2SURPO15042 1029 aaKnown RBP16.9■□□□□ 0.3
CT55-202ENST00000344129 DIAPH1O60610 1272 aaKnown RBP16.9■□□□□ 0.3
CT55-202ENST00000344129 CDK12Q9NYV4 1490 aaPredicted RBP16.9■□□□□ 0.3
CT55-202ENST00000344129 PEAK1Q9H792 1746 aa16.9■□□□□ 0.3
CT55-202ENST00000344129 PXDNQ92626 1479 aa16.89■□□□□ 0.29
CT55-202ENST00000344129 MAP3K19Q56UN5 1328 aa16.89■□□□□ 0.29
CT55-202ENST00000344129 ZBED9Q6R2W3 1325 aa16.89■□□□□ 0.29
CT55-202ENST00000344129 U2AF1L5P0DN76 240 aaPredicted RBP16.89■□□□□ 0.29
CT55-202ENST00000344129 U2AF1Q01081 240 aaKnown RBP eCLIP16.89■□□□□ 0.29
CT55-202ENST00000344129 INSRP06213 1382 aa16.89■□□□□ 0.29
CT55-202ENST00000344129 NUDCQ9Y266 331 aa16.88■□□□□ 0.29
CT55-202ENST00000344129 ALS2Q96Q42 1657 aa16.88■□□□□ 0.29
CT55-202ENST00000344129 SBNO1A3KN83 1393 aa16.87■□□□□ 0.29
CT55-202ENST00000344129 ZBTB7CA1YPR0 619 aa16.86■□□□□ 0.29
CT55-202ENST00000344129 HSP90AB2PQ58FF8 381 aa16.86■□□□□ 0.29
CT55-202ENST00000344129 TNS3Q68CZ2 1445 aa16.86■□□□□ 0.29
CT55-202ENST00000344129 IL13P35225 146 aa16.85■□□□□ 0.29
CT55-202ENST00000344129 AMPHP49418 695 aa16.85■□□□□ 0.29
CT55-202ENST00000344129 NFAT5O94916 1531 aa16.85■□□□□ 0.29
CT55-202ENST00000344129 SPATA31A3Q5VYP0 1347 aa16.84■□□□□ 0.29
CT55-202ENST00000344129 USP19O94966 1318 aa16.84■□□□□ 0.29
CT55-202ENST00000344129 SLIT3O75094 1523 aa16.83■□□□□ 0.29
CT55-202ENST00000344129 FLT4P35916 1363 aa16.83■□□□□ 0.29
CT55-202ENST00000344129 MED1Q15648 1581 aaPredicted RBP16.83■□□□□ 0.28
CT55-202ENST00000344129 APAF1O14727 1248 aa16.83■□□□□ 0.28
CT55-202ENST00000344129 GCP02774 474 aa16.83■□□□□ 0.28
CT55-202ENST00000344129 EIF4A2Q14240 407 aaKnown RBP16.83■□□□□ 0.28
CT55-202ENST00000344129 KCNH5Q8NCM2 988 aa16.83■□□□□ 0.28
CT55-202ENST00000344129 SOS2Q07890 1332 aaPredicted RBP16.83■□□□□ 0.28
CT55-202ENST00000344129 LTN1O94822 1766 aa16.83■□□□□ 0.28
CT55-202ENST00000344129 RUNDC1Q96C34 613 aa16.82■□□□□ 0.28
CT55-202ENST00000344129 ROBO1Q9Y6N7 1651 aa16.82■□□□□ 0.28
CT55-202ENST00000344129 NHSL1Q5SYE7 1610 aa16.82■□□□□ 0.28
CT55-202ENST00000344129 HOXC9P31274 260 aa16.82■□□□□ 0.28
CT55-202ENST00000344129 CABLES1Q8TDN4 633 aa16.82■□□□□ 0.28
CT55-202ENST00000344129 HMOX1P09601 288 aa16.81■□□□□ 0.28
CT55-202ENST00000344129 ARHGEF10O15013 1369 aa16.8■□□□□ 0.28
CT55-202ENST00000344129 LTV1Q96GA3 475 aaPredicted RBP16.79■□□□□ 0.28
CT55-202ENST00000344129 RRP7AQ9Y3A4 280 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms