RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 NUTM2AQ8IVF1 878 aaPredicted RBP10.94□□□□□ -0.66
HMGCR-202ENST00000343975 XRN1Q8IZH2 1706 aaKnown RBP10.94□□□□□ -0.66
HMGCR-202ENST00000343975 CDC42BPGQ6DT37 1551 aa10.93□□□□□ -0.66
HMGCR-202ENST00000343975 WDR43Q15061 677 aaKnown RBP eCLIP10.93□□□□□ -0.66
HMGCR-202ENST00000343975 ARHGEF28Q8N1W1 1705 aaKnown RBP10.93□□□□□ -0.66
HMGCR-202ENST00000343975 ATP7BP35670 1465 aa10.93□□□□□ -0.66
HMGCR-202ENST00000343975 NSD2O96028 1365 aa10.93□□□□□ -0.66
HMGCR-202ENST00000343975 PRDM11Q9NQV5 511 aa10.93□□□□□ -0.66
HMGCR-202ENST00000343975 EDC4Q6P2E9 1401 aaKnown RBP10.92□□□□□ -0.66
HMGCR-202ENST00000343975 A0A1W2PP64 1363 aa10.92□□□□□ -0.66
HMGCR-202ENST00000343975 EVA1CP58658 441 aa10.92□□□□□ -0.66
HMGCR-202ENST00000343975 CCDC9Q9Y3X0 531 aaKnown RBP10.91□□□□□ -0.66
HMGCR-202ENST00000343975 IQSEC2Q5JU85 1478 aa10.91□□□□□ -0.66
HMGCR-202ENST00000343975 MST1RQ04912 1400 aa10.91□□□□□ -0.66
HMGCR-202ENST00000343975 NME9Q86XW9 330 aa10.91□□□□□ -0.66
HMGCR-202ENST00000343975 MRS2Q9HD23 443 aa10.9□□□□□ -0.66
HMGCR-202ENST00000343975 A0A0G2JS52 829 aa10.89□□□□□ -0.67
HMGCR-202ENST00000343975 MYT1Q01538 1121 aa10.89□□□□□ -0.67
HMGCR-202ENST00000343975 DDX17Q92841 729 aaKnown RBP10.89□□□□□ -0.67
HMGCR-202ENST00000343975 PHF23Q9BUL5 403 aaPredicted RBP10.89□□□□□ -0.67
HMGCR-202ENST00000343975 FBXO41Q8TF61 875 aa10.88□□□□□ -0.67
HMGCR-202ENST00000343975 PNNQ9H307 717 aaKnown RBP10.88□□□□□ -0.67
HMGCR-202ENST00000343975 USP6P35125 1406 aa10.88□□□□□ -0.67
HMGCR-202ENST00000343975 ADAMTS2O95450 1211 aa10.88□□□□□ -0.67
HMGCR-202ENST00000343975 ZC3H6P61129 1189 aaKnown RBP10.88□□□□□ -0.67
HMGCR-202ENST00000343975 U2SURPO15042 1029 aaKnown RBP10.88□□□□□ -0.67
HMGCR-202ENST00000343975 SETD1AO15047 1707 aaKnown RBP10.88□□□□□ -0.67
HMGCR-202ENST00000343975 SBNO1A3KN83 1393 aa10.87□□□□□ -0.67
HMGCR-202ENST00000343975 ADGRB2O60241 1585 aa10.87□□□□□ -0.67
HMGCR-202ENST00000343975 MYBBP1AQ9BQG0 1328 aaKnown RBP10.87□□□□□ -0.67
HMGCR-202ENST00000343975 LTV1Q96GA3 475 aaPredicted RBP10.87□□□□□ -0.67
HMGCR-202ENST00000343975 NGLY1Q96IV0 654 aa10.87□□□□□ -0.67
HMGCR-202ENST00000343975 FYB1O15117 783 aa10.87□□□□□ -0.67
HMGCR-202ENST00000343975 POLR3AO14802 1390 aaPredicted RBP10.86□□□□□ -0.67
HMGCR-202ENST00000343975 SPATA31A3Q5VYP0 1347 aa10.86□□□□□ -0.67
HMGCR-202ENST00000343975 SMG6Q86US8 1419 aaKnown RBP10.86□□□□□ -0.67
HMGCR-202ENST00000343975 JCADQ9P266 1359 aa10.86□□□□□ -0.67
HMGCR-202ENST00000343975 LTBP4Q8N2S1 1624 aa10.85□□□□□ -0.67
HMGCR-202ENST00000343975 GCP02774 474 aa10.85□□□□□ -0.67
HMGCR-202ENST00000343975 PRKRIP1Q9H875 184 aaPredicted RBP10.85□□□□□ -0.67
HMGCR-202ENST00000343975 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.85□□□□□ -0.67
HMGCR-202ENST00000343975 TNS3Q68CZ2 1445 aa10.85□□□□□ -0.67
HMGCR-202ENST00000343975 CARD14Q9BXL6 1004 aa10.85□□□□□ -0.67
HMGCR-202ENST00000343975 ITSN1Q15811 1721 aa10.84□□□□□ -0.67
HMGCR-202ENST00000343975 SOS2Q07890 1332 aaPredicted RBP10.84□□□□□ -0.67
HMGCR-202ENST00000343975 MAPK8IP3Q9UPT6 1336 aa10.84□□□□□ -0.67
HMGCR-202ENST00000343975 HSPA1LP34931 641 aa10.84□□□□□ -0.67
HMGCR-202ENST00000343975 CABLES1Q8TDN4 633 aa10.84□□□□□ -0.67
HMGCR-202ENST00000343975 DIAPH1O60610 1272 aaKnown RBP10.83□□□□□ -0.68
HMGCR-202ENST00000343975 MTHFSP49914 203 aa10.83□□□□□ -0.68
HMGCR-202ENST00000343975 STRN4Q9NRL3 753 aa10.83□□□□□ -0.68
HMGCR-202ENST00000343975 NLRP2Q9NX02 1062 aa10.83□□□□□ -0.68
HMGCR-202ENST00000343975 NPC1L1Q9UHC9 1359 aa10.83□□□□□ -0.68
HMGCR-202ENST00000343975 AMER1Q5JTC6 1135 aaPredicted RBP10.83□□□□□ -0.68
HMGCR-202ENST00000343975 KIF1AQ12756 1690 aa10.83□□□□□ -0.68
HMGCR-202ENST00000343975 NALCNQ8IZF0 1738 aa10.83□□□□□ -0.68
HMGCR-202ENST00000343975 U2AF1L5P0DN76 240 aaPredicted RBP10.82□□□□□ -0.68
HMGCR-202ENST00000343975 U2AF1Q01081 240 aaKnown RBP eCLIP10.82□□□□□ -0.689e-7■■■■□ 23.5
HMGCR-202ENST00000343975 FAM9BQ8IZU0 186 aa10.82□□□□□ -0.68
HMGCR-202ENST00000343975 RRS1Q15050 365 aaKnown RBP10.82□□□□□ -0.68
HMGCR-202ENST00000343975 FMN2Q9NZ56 1722 aa10.82□□□□□ -0.68
HMGCR-202ENST00000343975 CPSF1Q10570 1443 aaKnown RBP10.82□□□□□ -0.68
HMGCR-202ENST00000343975 C8orf37Q96NL8 207 aa10.82□□□□□ -0.68
HMGCR-202ENST00000343975 SPATA31A6Q5VVP1 1343 aa10.82□□□□□ -0.68
HMGCR-202ENST00000343975 TOM1L2Q6ZVM7 507 aa10.81□□□□□ -0.68
HMGCR-202ENST00000343975 PPP2R1AP30153 589 aa10.81□□□□□ -0.68
HMGCR-202ENST00000343975 CCER2I3L3R5 266 aa10.81□□□□□ -0.68
HMGCR-202ENST00000343975 ZRANB1Q9UGI0 708 aa10.81□□□□□ -0.68
HMGCR-202ENST00000343975 RAPGEF4Q8WZA2 1011 aa10.8□□□□□ -0.68
HMGCR-202ENST00000343975 PER1O15534 1290 aaPredicted RBP10.8□□□□□ -0.68
HMGCR-202ENST00000343975 CHRNA2Q15822 529 aa10.8□□□□□ -0.68
HMGCR-202ENST00000343975 MIER1Q8N108 512 aa10.79□□□□□ -0.68
HMGCR-202ENST00000343975 FLT4P35916 1363 aa10.78□□□□□ -0.68
HMGCR-202ENST00000343975 EMILIN1Q9Y6C2 1016 aa10.78□□□□□ -0.68
HMGCR-202ENST00000343975 USP31Q70CQ4 1352 aa10.78□□□□□ -0.68
HMGCR-202ENST00000343975 USP35Q9P2H5 1018 aa10.78□□□□□ -0.68
HMGCR-202ENST00000343975 STRCP1A6NGW2 1772 aa10.77□□□□□ -0.69
HMGCR-202ENST00000343975 MAP3K19Q56UN5 1328 aa10.77□□□□□ -0.69
HMGCR-202ENST00000343975 IP6K1Q92551 441 aa10.77□□□□□ -0.69
HMGCR-202ENST00000343975 ANKRD24Q8TF21 1146 aa10.76□□□□□ -0.69
HMGCR-202ENST00000343975 BTG4Q9NY30 223 aa10.76□□□□□ -0.69
HMGCR-202ENST00000343975 TATP17735 454 aaPredicted RBP10.76□□□□□ -0.69
HMGCR-202ENST00000343975 YTHDC1Q96MU7 727 aaKnown RBP10.76□□□□□ -0.69
HMGCR-202ENST00000343975 KIAA0232Q92628 1395 aa10.75□□□□□ -0.69
HMGCR-202ENST00000343975 POLKQ9UBT6 870 aa10.75□□□□□ -0.69
HMGCR-202ENST00000343975 PNPLA6Q8IY17 1366 aa10.75□□□□□ -0.69
HMGCR-202ENST00000343975 KIF24Q5T7B8 1368 aa10.75□□□□□ -0.69
HMGCR-202ENST00000343975 AATKQ6ZMQ8 1374 aa10.75□□□□□ -0.69
HMGCR-202ENST00000343975 ARHGEF25Q86VW2 580 aa10.75□□□□□ -0.69
HMGCR-202ENST00000343975 RTF1Q92541 710 aaKnown RBP10.75□□□□□ -0.69
HMGCR-202ENST00000343975 USP21Q9UK80 565 aa10.74□□□□□ -0.69
HMGCR-202ENST00000343975 ROBO1Q9Y6N7 1651 aa10.74□□□□□ -0.69
HMGCR-202ENST00000343975 HOXC9P31274 260 aa10.74□□□□□ -0.69
HMGCR-202ENST00000343975 C1orf141Q5JVX7 400 aa10.74□□□□□ -0.69
HMGCR-202ENST00000343975 ZNF772Q68DY9 489 aaPredicted RBP10.74□□□□□ -0.69
HMGCR-202ENST00000343975 RTL1A6NKG5 1358 aa10.74□□□□□ -0.69
HMGCR-202ENST00000343975 PARD3Q8TEW0 1356 aa10.74□□□□□ -0.69
HMGCR-202ENST00000343975 USP19O94966 1318 aa10.73□□□□□ -0.69
HMGCR-202ENST00000343975 HSP90AB2PQ58FF8 381 aa10.73□□□□□ -0.69
HMGCR-202ENST00000343975 LMOD3Q0VAK6 560 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms