RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 BMP2KLQ5H9B9 411 aa22.81■■□□□ 1.24
SMPD1-201ENST00000342245 DDX19BQ9UMR2 479 aa22.81■■□□□ 1.24
SMPD1-201ENST00000342245 KIF3AQ9Y496 699 aa22.8■■□□□ 1.24
SMPD1-201ENST00000342245 PHF23Q9BUL5 403 aaPredicted RBP22.79■■□□□ 1.24
SMPD1-201ENST00000342245 CWC22Q9HCG8 908 aaKnown RBP22.79■■□□□ 1.24
SMPD1-201ENST00000342245 MYOM1P52179 1685 aa22.79■■□□□ 1.24
SMPD1-201ENST00000342245 CCDC27Q2M243 656 aa22.79■■□□□ 1.24
SMPD1-201ENST00000342245 GAS2L2Q8NHY3 880 aa22.79■■□□□ 1.24
SMPD1-201ENST00000342245 PTMAP06454 111 aaKnown RBP22.78■■□□□ 1.24
SMPD1-201ENST00000342245 CYP2E1P05181 493 aaPredicted RBP22.77■■□□□ 1.24
SMPD1-201ENST00000342245 CFAP44Q96MT7 982 aa22.77■■□□□ 1.24
SMPD1-201ENST00000342245 ATP2B3Q16720 1220 aa22.77■■□□□ 1.24
SMPD1-201ENST00000342245 PIBF1Q8WXW3 757 aa22.77■■□□□ 1.24
SMPD1-201ENST00000342245 REREQ9P2R6 1566 aa22.77■■□□□ 1.24
SMPD1-201ENST00000342245 NUCB1Q02818 461 aa22.76■■□□□ 1.23
SMPD1-201ENST00000342245 RGL3Q3MIN7 710 aa22.76■■□□□ 1.23
SMPD1-201ENST00000342245 RUNDC1Q96C34 613 aa22.76■■□□□ 1.23
SMPD1-201ENST00000342245 CFAP74Q9C0B2 1584 aa22.76■■□□□ 1.23
SMPD1-201ENST00000342245 FEZ1Q99689 392 aa22.75■■□□□ 1.23
SMPD1-201ENST00000342245 FOXD4L1Q9NU39 408 aa22.75■■□□□ 1.23
SMPD1-201ENST00000342245 TNNQ9UQP3 1299 aa22.75■■□□□ 1.23
SMPD1-201ENST00000342245 IQSEC2Q5JU85 1478 aa22.75■■□□□ 1.23
SMPD1-201ENST00000342245 ARHGEF5Q12774 1597 aa22.75■■□□□ 1.23
SMPD1-201ENST00000342245 SAMD9LQ8IVG5 1584 aa22.74■■□□□ 1.23
SMPD1-201ENST00000342245 MBD3O95983 291 aa22.74■■□□□ 1.23
SMPD1-201ENST00000342245 PDCL2Q8N4E4 241 aa22.73■■□□□ 1.23
SMPD1-201ENST00000342245 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.73■■□□□ 1.23
SMPD1-201ENST00000342245 CD2BP2O95400 341 aaKnown RBP22.73■■□□□ 1.23
SMPD1-201ENST00000342245 RABEP1Q15276 862 aa22.73■■□□□ 1.23
SMPD1-201ENST00000342245 KDM5AP29375 1690 aaKnown RBP22.73■■□□□ 1.23
SMPD1-201ENST00000342245 YEATS2Q9ULM3 1422 aa22.72■■□□□ 1.23
SMPD1-201ENST00000342245 ATP10AO60312 1499 aa22.72■■□□□ 1.23
SMPD1-201ENST00000342245 PLA2R1Q13018 1463 aa22.72■■□□□ 1.23
SMPD1-201ENST00000342245 CDC42BPBQ9Y5S2 1711 aa22.71■■□□□ 1.23
SMPD1-201ENST00000342245 VGFO15240 615 aaPredicted RBP22.71■■□□□ 1.23
SMPD1-201ENST00000342245 NOLC1Q14978 699 aaKnown RBP eCLIP22.71■■□□□ 1.23
SMPD1-201ENST00000342245 UNC13BO14795 1591 aa22.71■■□□□ 1.23
SMPD1-201ENST00000342245 CDK11BP21127 795 aaKnown RBP22.7■■□□□ 1.22
SMPD1-201ENST00000342245 DIAPH3Q9NSV4 1193 aa22.7■■□□□ 1.22
SMPD1-201ENST00000342245 SCAF11Q99590 1463 aaKnown RBP22.69■■□□□ 1.22
SMPD1-201ENST00000342245 GABPB1Q06547 395 aaPredicted RBP22.69■■□□□ 1.22
SMPD1-201ENST00000342245 UVSSAQ2YD98 709 aa22.69■■□□□ 1.22
SMPD1-201ENST00000342245 CHD1LQ86WJ1 897 aa22.69■■□□□ 1.22
SMPD1-201ENST00000342245 GPT2Q8TD30 523 aa22.69■■□□□ 1.22
SMPD1-201ENST00000342245 SPTLC3Q9NUV7 552 aa22.69■■□□□ 1.22
SMPD1-201ENST00000342245 SLC20A2Q08357 652 aa22.68■■□□□ 1.22
SMPD1-201ENST00000342245 BCL2L13Q9BXK5 485 aa22.68■■□□□ 1.22
SMPD1-201ENST00000342245 PREX2Q70Z35 1606 aa22.68■■□□□ 1.22
SMPD1-201ENST00000342245 PRPF40AO75400 957 aaKnown RBP22.68■■□□□ 1.22
SMPD1-201ENST00000342245 SYAP1Q96A49 352 aaPredicted RBP22.68■■□□□ 1.22
SMPD1-201ENST00000342245 SHPRHQ149N8 1683 aa22.68■■□□□ 1.22
SMPD1-201ENST00000342245 FKBP5Q13451 457 aaPredicted RBP22.67■■□□□ 1.22
SMPD1-201ENST00000342245 FAM184AQ8NB25 1140 aa22.67■■□□□ 1.22
SMPD1-201ENST00000342245 TSPY26PQ9H489 355 aa22.67■■□□□ 1.22
SMPD1-201ENST00000342245 BCL2L12Q9HB09 334 aa22.67■■□□□ 1.22
SMPD1-201ENST00000342245 CHAF1AQ13111 956 aaPredicted RBP22.66■■□□□ 1.22
SMPD1-201ENST00000342245 ZNF830Q96NB3 372 aaPredicted RBP22.66■■□□□ 1.22
SMPD1-201ENST00000342245 OGFRQ9NZT2 677 aa22.66■■□□□ 1.22
SMPD1-201ENST00000342245 SYCE3A1L190 88 aa22.66■■□□□ 1.22
SMPD1-201ENST00000342245 ANKRD7Q92527 254 aa22.66■■□□□ 1.22
SMPD1-201ENST00000342245 CHD1O14646 1710 aa22.66■■□□□ 1.22
SMPD1-201ENST00000342245 PHF14O94880 888 aa22.65■■□□□ 1.22
SMPD1-201ENST00000342245 RSPH4AQ5TD94 716 aa22.65■■□□□ 1.22
SMPD1-201ENST00000342245 TCP11L2Q8N4U5 519 aa22.65■■□□□ 1.22
SMPD1-201ENST00000342245 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.65■■□□□ 1.22
SMPD1-201ENST00000342245 SYCP2Q9BX26 1530 aa22.65■■□□□ 1.22
SMPD1-201ENST00000342245 ZNF771Q7L3S4 317 aaPredicted RBP22.65■■□□□ 1.22
SMPD1-201ENST00000342245 CGNQ9P2M7 1197 aaKnown RBP22.65■■□□□ 1.22
SMPD1-201ENST00000342245 TMEM63CQ9P1W3 806 aa22.64■■□□□ 1.21
SMPD1-201ENST00000342245 MADDQ8WXG6 1647 aa22.64■■□□□ 1.21
SMPD1-201ENST00000342245 TTC37Q6PGP7 1564 aa22.64■■□□□ 1.21
SMPD1-201ENST00000342245 ITPRIPQ8IWB1 547 aa22.64■■□□□ 1.21
SMPD1-201ENST00000342245 CEP152O94986 1710 aa22.63■■□□□ 1.21
SMPD1-201ENST00000342245 CCDC66A2RUB6 948 aa22.63■■□□□ 1.21
SMPD1-201ENST00000342245 TBC1D9Q6ZT07 1266 aa22.63■■□□□ 1.21
SMPD1-201ENST00000342245 ZBTB40Q9NUA8 1239 aa22.63■■□□□ 1.21
SMPD1-201ENST00000342245 RBM27Q9P2N5 1060 aaKnown RBP22.63■■□□□ 1.21
SMPD1-201ENST00000342245 ARHGAP5Q13017 1502 aa22.63■■□□□ 1.21
SMPD1-201ENST00000342245 IQGAP3Q86VI3 1631 aa22.63■■□□□ 1.21
SMPD1-201ENST00000342245 ATF7IPQ6VMQ6 1270 aa22.63■■□□□ 1.21
SMPD1-201ENST00000342245 UHRF1BP1LA0JNW5 1464 aa22.62■■□□□ 1.21
SMPD1-201ENST00000342245 GCC1Q96CN9 775 aa22.62■■□□□ 1.21
SMPD1-201ENST00000342245 ERCC6L2Q5T890 1561 aa22.62■■□□□ 1.21
SMPD1-201ENST00000342245 AK9Q5TCS8 1911 aa22.62■■□□□ 1.21
SMPD1-201ENST00000342245 ADGRL1O94910 1474 aa22.61■■□□□ 1.21
SMPD1-201ENST00000342245 TRIM27P14373 513 aa22.61■■□□□ 1.21
SMPD1-201ENST00000342245 SYCP1Q15431 976 aa22.61■■□□□ 1.21
SMPD1-201ENST00000342245 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.61■■□□□ 1.21
SMPD1-201ENST00000342245 CDC45O75419 566 aa22.6■■□□□ 1.21
SMPD1-201ENST00000342245 TSC1Q92574 1164 aa22.6■■□□□ 1.21
SMPD1-201ENST00000342245 RBM42Q9BTD8 480 aaKnown RBP22.6■■□□□ 1.21
SMPD1-201ENST00000342245 LNPKQ9C0E8 428 aa22.6■■□□□ 1.21
SMPD1-201ENST00000342245 CLTCL1P53675 1640 aa22.6■■□□□ 1.21
SMPD1-201ENST00000342245 SMC4Q9NTJ3 1288 aa22.6■■□□□ 1.21
SMPD1-201ENST00000342245 TPM3P06753 285 aa22.59■■□□□ 1.21
SMPD1-201ENST00000342245 JARID2Q92833 1246 aaPredicted RBP22.59■■□□□ 1.21
SMPD1-201ENST00000342245 DUOX2Q9NRD8 1548 aa22.59■■□□□ 1.21
SMPD1-201ENST00000342245 SPDYE4A6NLX3 237 aa22.59■■□□□ 1.21
SMPD1-201ENST00000342245 NEUROD2Q15784 382 aa22.59■■□□□ 1.21
SMPD1-201ENST00000342245 KLHL34Q8N239 644 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms