RNA–Protein interactions for RNA: ENST00000341259.6

SH2B3-201, Transcript of SH2B adaptor protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2B3, Length 5,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3-201ENST00000341259 CNTROBQ8N137 903 aa23.43■■□□□ 1.34
SH2B3-201ENST00000341259 CREBRFQ8IUR6 639 aa23.43■■□□□ 1.34
SH2B3-201ENST00000341259 HDGFL1Q5TGJ6 251 aa23.42■■□□□ 1.34
SH2B3-201ENST00000341259 PTPRKQ15262 1439 aa23.42■■□□□ 1.34
SH2B3-201ENST00000341259 CPLX1O14810 134 aa23.42■■□□□ 1.34
SH2B3-201ENST00000341259 NFKBIBQ15653 356 aa23.41■■□□□ 1.34
SH2B3-201ENST00000341259 ANKLE2Q86XL3 938 aa23.41■■□□□ 1.34
SH2B3-201ENST00000341259 CLASRPQ8N2M8 674 aaKnown RBP23.41■■□□□ 1.34
SH2B3-201ENST00000341259 FANCAO15360 1455 aa23.41■■□□□ 1.34
SH2B3-201ENST00000341259 TRDNQ13061 729 aa23.41■■□□□ 1.34
SH2B3-201ENST00000341259 WAPLQ7Z5K2 1190 aa23.41■■□□□ 1.34
SH2B3-201ENST00000341259 VPS37DQ86XT2 251 aa23.41■■□□□ 1.34
SH2B3-201ENST00000341259 TMPOP42166 694 aaKnown RBP23.4■■□□□ 1.34
SH2B3-201ENST00000341259 CCT4P50991 539 aaKnown RBP23.4■■□□□ 1.34
SH2B3-201ENST00000341259 TATP17735 454 aaPredicted RBP23.4■■□□□ 1.34
SH2B3-201ENST00000341259 VPS37CA5D8V6 355 aaPredicted RBP23.4■■□□□ 1.34
SH2B3-201ENST00000341259 TRIM29Q14134 588 aa23.4■■□□□ 1.34
SH2B3-201ENST00000341259 GOLGA6L19H0YKK7 550 aa23.4■■□□□ 1.34
SH2B3-201ENST00000341259 NOL10Q9BSC4 688 aaKnown RBP23.4■■□□□ 1.34
SH2B3-201ENST00000341259 CCDC61Q9Y6R9 512 aa23.4■■□□□ 1.34
SH2B3-201ENST00000341259 NFE2L2Q16236 605 aa23.39■■□□□ 1.34
SH2B3-201ENST00000341259 MARCH6O60337 910 aa23.39■■□□□ 1.33
SH2B3-201ENST00000341259 SCAF11Q99590 1463 aaKnown RBP23.39■■□□□ 1.33
SH2B3-201ENST00000341259 MSH5O43196 834 aa23.38■■□□□ 1.33
SH2B3-201ENST00000341259 AMOTL1Q8IY63 956 aa23.38■■□□□ 1.33
SH2B3-201ENST00000341259 ZNF530Q6P9A1 599 aaPredicted RBP23.38■■□□□ 1.33
SH2B3-201ENST00000341259 BACH2Q9BYV9 841 aa23.38■■□□□ 1.33
SH2B3-201ENST00000341259 BECN2A8MW95 431 aa23.38■■□□□ 1.33
SH2B3-201ENST00000341259 MAPKBP1O60336 1514 aa23.38■■□□□ 1.33
SH2B3-201ENST00000341259 FSD1Q9BTV5 496 aa23.37■■□□□ 1.33
SH2B3-201ENST00000341259 CTTNBP2Q8WZ74 1663 aa23.37■■□□□ 1.33
SH2B3-201ENST00000341259 MEX3CQ5U5Q3 659 aaKnown RBP23.36■■□□□ 1.33
SH2B3-201ENST00000341259 ARID3AQ99856 593 aa23.36■■□□□ 1.33
SH2B3-201ENST00000341259 NOS1P29475 1434 aa23.36■■□□□ 1.33
SH2B3-201ENST00000341259 WASHC4Q2M389 1173 aa23.35■■□□□ 1.33
SH2B3-201ENST00000341259 NFXL1Q6ZNB6 911 aa23.35■■□□□ 1.33
SH2B3-201ENST00000341259 NUP153P49790 1475 aaKnown RBP23.34■■□□□ 1.33
SH2B3-201ENST00000341259 BICD2Q8TD16 824 aa23.34■■□□□ 1.33
SH2B3-201ENST00000341259 ERC1Q8IUD2 1116 aa23.34■■□□□ 1.33
SH2B3-201ENST00000341259 ATP10BO94823 1461 aa23.33■■□□□ 1.33
SH2B3-201ENST00000341259 DHX29Q7Z478 1369 aaKnown RBP23.33■■□□□ 1.33
SH2B3-201ENST00000341259 DISP3Q9P2K9 1392 aa23.33■■□□□ 1.33
SH2B3-201ENST00000341259 VPS53Q5VIR6 699 aa23.33■■□□□ 1.33
SH2B3-201ENST00000341259 FBXO31Q5XUX0 539 aaPredicted RBP23.33■■□□□ 1.33
SH2B3-201ENST00000341259 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.33■■□□□ 1.32
SH2B3-201ENST00000341259 TPD52L1Q16890 204 aaPredicted RBP23.32■■□□□ 1.32
SH2B3-201ENST00000341259 STRN4Q9NRL3 753 aa23.32■■□□□ 1.32
SH2B3-201ENST00000341259 IDI1Q13907 227 aa23.32■■□□□ 1.32
SH2B3-201ENST00000341259 SRCIN1Q9C0H9 1055 aa23.32■■□□□ 1.32
SH2B3-201ENST00000341259 PSMA5P28066 241 aa23.32■■□□□ 1.32
SH2B3-201ENST00000341259 ZNF428Q96B54 188 aa23.32■■□□□ 1.32
SH2B3-201ENST00000341259 DENND4BO75064 1496 aaPredicted RBP23.32■■□□□ 1.32
SH2B3-201ENST00000341259 ITSN2Q9NZM3 1697 aa23.32■■□□□ 1.32
SH2B3-201ENST00000341259 CHD1LQ86WJ1 897 aa23.31■■□□□ 1.32
SH2B3-201ENST00000341259 LRRCC1Q9C099 1032 aa23.31■■□□□ 1.32
SH2B3-201ENST00000341259 ERICH2A1L162 156 aa23.3■■□□□ 1.32
SH2B3-201ENST00000341259 FOSBP53539 338 aa23.3■■□□□ 1.32
SH2B3-201ENST00000341259 RABEP1Q15276 862 aa23.3■■□□□ 1.32
SH2B3-201ENST00000341259 KIF6Q6ZMV9 814 aa23.3■■□□□ 1.32
SH2B3-201ENST00000341259 RALYLQ86SE5 291 aaKnown RBP23.3■■□□□ 1.32
SH2B3-201ENST00000341259 DNAJC2Q99543 621 aaKnown RBP23.3■■□□□ 1.32
SH2B3-201ENST00000341259 SPG7Q9UQ90 795 aa23.3■■□□□ 1.32
SH2B3-201ENST00000341259 CABP4P57796 275 aa23.3■■□□□ 1.32
SH2B3-201ENST00000341259 RBM42Q9BTD8 480 aaKnown RBP23.3■■□□□ 1.32
SH2B3-201ENST00000341259 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.29■■□□□ 1.32
SH2B3-201ENST00000341259 NEK4P51957 841 aa23.28■■□□□ 1.32
SH2B3-201ENST00000341259 TMEM57Q8N5G2 664 aa23.28■■□□□ 1.32
SH2B3-201ENST00000341259 HIP1O00291 1037 aa23.28■■□□□ 1.32
SH2B3-201ENST00000341259 NME9Q86XW9 330 aa23.28■■□□□ 1.32
SH2B3-201ENST00000341259 C14orf93Q9H972 538 aaKnown RBP23.28■■□□□ 1.32
SH2B3-201ENST00000341259 PES1O00541 588 aaKnown RBP23.27■■□□□ 1.32
SH2B3-201ENST00000341259 THUMPD2Q9BTF0 503 aaKnown RBP23.27■■□□□ 1.32
SH2B3-201ENST00000341259 NKTRP30414 1462 aaKnown RBP23.27■■□□□ 1.32
SH2B3-201ENST00000341259 AMER1Q5JTC6 1135 aaPredicted RBP23.26■■□□□ 1.31
SH2B3-201ENST00000341259 PLCH2O75038 1416 aa23.26■■□□□ 1.31
SH2B3-201ENST00000341259 XPCQ01831 940 aaPredicted RBP23.26■■□□□ 1.31
SH2B3-201ENST00000341259 TOM1L2Q6ZVM7 507 aa23.26■■□□□ 1.31
SH2B3-201ENST00000341259 BTBD11A6QL63 1104 aa23.26■■□□□ 1.31
SH2B3-201ENST00000341259 KDM5BQ9UGL1 1544 aa23.26■■□□□ 1.31
SH2B3-201ENST00000341259 GNAT3A8MTJ3 354 aa23.25■■□□□ 1.31
SH2B3-201ENST00000341259 ADAMTS12P58397 1594 aa23.25■■□□□ 1.31
SH2B3-201ENST00000341259 RARSP54136 660 aaKnown RBP23.25■■□□□ 1.31
SH2B3-201ENST00000341259 TPM3P06753 285 aa23.25■■□□□ 1.31
SH2B3-201ENST00000341259 DUOX2Q9NRD8 1548 aa23.24■■□□□ 1.31
SH2B3-201ENST00000341259 ABCC11Q96J66 1382 aa23.24■■□□□ 1.31
SH2B3-201ENST00000341259 WASLO00401 505 aaPredicted RBP23.24■■□□□ 1.31
SH2B3-201ENST00000341259 MCM2P49736 904 aa23.24■■□□□ 1.31
SH2B3-201ENST00000341259 FBXW7Q969H0 707 aa23.24■■□□□ 1.31
SH2B3-201ENST00000341259 RBM33Q96EV2 1170 aaKnown RBP23.24■■□□□ 1.31
SH2B3-201ENST00000341259 TRIM34Q9BYJ4 488 aa23.24■■□□□ 1.31
SH2B3-201ENST00000341259 IFT57Q9NWB7 429 aa23.24■■□□□ 1.31
SH2B3-201ENST00000341259 CFAP43Q8NDM7 1665 aa23.24■■□□□ 1.31
SH2B3-201ENST00000341259 KIAA0556O60303 1618 aa23.24■■□□□ 1.31
SH2B3-201ENST00000341259 TCOF1Q13428 1488 aaKnown RBP23.24■■□□□ 1.31
SH2B3-201ENST00000341259 C20orf194Q5TEA3 1177 aa23.24■■□□□ 1.31
SH2B3-201ENST00000341259 MCM10Q7L590 875 aa23.23■■□□□ 1.31
SH2B3-201ENST00000341259 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.23■■□□□ 1.31
SH2B3-201ENST00000341259 RAD21O60216 631 aa23.23■■□□□ 1.31
SH2B3-201ENST00000341259 SYCP2Q9BX26 1530 aa23.23■■□□□ 1.31
SH2B3-201ENST00000341259 MYL6BP14649 208 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms